Protein–RNA interactions for Protein: Q80YS6

Afap1, Actin filament-associated protein 1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Afap1Q80YS6 Gm25239-201ENSMUST00000174915 86 ntBASIC58,95■■■■■ 7,03
Afap1Q80YS6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC54,9■■■■■ 6,38
Afap1Q80YS6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC53,98■■■■■ 6,23
Afap1Q80YS6 Gm24109-201ENSMUST00000175489 103 ntBASIC51,48■■■■■ 5,83
Afap1Q80YS6 Gm15042-201ENSMUST00000120212 883 ntBASIC50,68■■■■■ 5,7
Afap1Q80YS6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC49,83■■■■■ 5,57
Afap1Q80YS6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC49,66■■■■■ 5,54
Afap1Q80YS6 Gm15045-201ENSMUST00000117359 883 ntBASIC49,49■■■■■ 5,51
Afap1Q80YS6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC49,46■■■■■ 5,51
Afap1Q80YS6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC49,3■■■■■ 5,48
Afap1Q80YS6 Gm23366-201ENSMUST00000175022 89 ntBASIC49,07■■■■■ 5,45
Afap1Q80YS6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC48,34■■■■■ 5,33
Afap1Q80YS6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC47,84■■■■■ 5,25
Afap1Q80YS6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC47,82■■■■■ 5,25
Afap1Q80YS6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC47,81■■■■■ 5,24
Afap1Q80YS6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC47,6■■■■■ 5,21
Afap1Q80YS6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC47,42■■■■■ 5,18
Afap1Q80YS6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC47,03■■■■■ 5,12
Afap1Q80YS6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC46,98■■■■■ 5,11
Afap1Q80YS6 Gm25238-201ENSMUST00000174914 89 ntBASIC46,83■■■■■ 5,09
Afap1Q80YS6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC46,79■■■■■ 5,08
Afap1Q80YS6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC46,77■■■■■ 5,08
Afap1Q80YS6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC46,27■■■■■ 5
Afap1Q80YS6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC45,99■■■■■ 4,95
Afap1Q80YS6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC45,8■■■■■ 4,92
Afap1Q80YS6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC45,78■■■■■ 4,92
Afap1Q80YS6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC45,65■■■■■ 4,9
Afap1Q80YS6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC45,48■■■■■ 4,87
Afap1Q80YS6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC45,45■■■■■ 4,87
Afap1Q80YS6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC45,23■■■■■ 4,83
Afap1Q80YS6 Gm25262-201ENSMUST00000174934 133 ntBASIC45,17■■■■■ 4,82
Afap1Q80YS6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC45,14■■■■■ 4,82
Afap1Q80YS6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC45,1■■■■■ 4,81
Afap1Q80YS6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC45,07■■■■■ 4,81
Afap1Q80YS6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC44,86■■■■■ 4,77
Afap1Q80YS6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC44,86■■■■■ 4,77
Afap1Q80YS6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC44,82■■■■■ 4,76
Afap1Q80YS6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC44,7■■■■■ 4,75
Afap1Q80YS6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC44,63■■■■■ 4,74
Afap1Q80YS6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC44,6■■■■■ 4,73
Afap1Q80YS6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC44,55■■■■■ 4,72
Afap1Q80YS6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC44,45■■■■■ 4,71
Afap1Q80YS6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC44,42■■■■■ 4,7
Afap1Q80YS6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC44,39■■■■■ 4,7
Afap1Q80YS6 Gm26115-201ENSMUST00000175605 87 ntBASIC44,38■■■■■ 4,7
Afap1Q80YS6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC44,38■■■■■ 4,7
Afap1Q80YS6 Gm27325-201ENSMUST00000175467 74 ntBASIC44,31■■■■■ 4,68
Afap1Q80YS6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC44,29■■■■■ 4,68
Afap1Q80YS6 Gm8109-201ENSMUST00000194076 746 ntBASIC44,08■■■■■ 4,65
Afap1Q80YS6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC44,06■■■■■ 4,64
Afap1Q80YS6 Rab21-202ENSMUST00000218831 843 ntBASIC43,99■■■■■ 4,63
Afap1Q80YS6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC43,98■■■■■ 4,63
Afap1Q80YS6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC43,91■■■■■ 4,62
Afap1Q80YS6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC43,76■■■■■ 4,6
Afap1Q80YS6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC43,73■■■■■ 4,59
Afap1Q80YS6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC43,66■■■■■ 4,58
Afap1Q80YS6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC43,59■■■■■ 4,57
Afap1Q80YS6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC43,53■■■■■ 4,56
Afap1Q80YS6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC43,51■■■■■ 4,56
Afap1Q80YS6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC43,49■■■■■ 4,55
Afap1Q80YS6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC43,37■■■■■ 4,53
Afap1Q80YS6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC43,32■■■■■ 4,53
Afap1Q80YS6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC43,24■■■■■ 4,51
Afap1Q80YS6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC43,22■■■■■ 4,51
Afap1Q80YS6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC43,13■■■■■ 4,49
Afap1Q80YS6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC43,1■■■■■ 4,49
Afap1Q80YS6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC43,07■■■■■ 4,49
Afap1Q80YS6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC42,88■■■■■ 4,45
Afap1Q80YS6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC42,86■■■■■ 4,45
Afap1Q80YS6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC42,85■■■■■ 4,45
Afap1Q80YS6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC42,76■■■■■ 4,44
Afap1Q80YS6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC42,72■■■■■ 4,43
Afap1Q80YS6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC42,71■■■■■ 4,43
Afap1Q80YS6 Gm17082-201ENSMUST00000166043 1091 ntBASIC42,66■■■■■ 4,42
Afap1Q80YS6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC42,65■■■■■ 4,42
Afap1Q80YS6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC42,62■■■■■ 4,41
Afap1Q80YS6 Gm24804-201ENSMUST00000174982 85 ntBASIC42,59■■■■■ 4,41
Afap1Q80YS6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC42,59■■■■■ 4,41
Afap1Q80YS6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC42,48■■■■■ 4,39
Afap1Q80YS6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC42,35■■■■■ 4,37
Afap1Q80YS6 Psd-208ENSMUST00000224556 2034 ntBASIC42,29■■■■■ 4,36
Afap1Q80YS6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC42,28■■■■■ 4,36
Afap1Q80YS6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC42,22■■■■■ 4,35
Afap1Q80YS6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC42,21■■■■■ 4,35
Afap1Q80YS6 Gm27322-201ENSMUST00000184007 104 ntBASIC42,15■■■■■ 4,34
Afap1Q80YS6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC42,15■■■■■ 4,34
Afap1Q80YS6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC42,11■■■■■ 4,33
Afap1Q80YS6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC42,11■■■■■ 4,33
Afap1Q80YS6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC42,07■■■■■ 4,33
Afap1Q80YS6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC42,03■■■■■ 4,32
Afap1Q80YS6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC42■■■■■ 4,31
Afap1Q80YS6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC41,97■■■■■ 4,31
Afap1Q80YS6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC41,93■■■■■ 4,3
Afap1Q80YS6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC41,91■■■■■ 4,3
Afap1Q80YS6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC41,9■■■■■ 4,3
Afap1Q80YS6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC41,9■■■■■ 4,3
Afap1Q80YS6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC41,81■■■■■ 4,28
Afap1Q80YS6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC41,79■■■■■ 4,28
Afap1Q80YS6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC41,79■■■■■ 4,28
Afap1Q80YS6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC41,77■■■■■ 4,28
Retrieved 100 of 76,532 protein–RNA pairs in 9,9 ms