Protein–RNA interactions for Protein: Q80YS6

Afap1, Actin filament-associated protein 1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Afap1Q80YS6 Gm25239-201ENSMUST00000174915 86 ntBASIC58.95■■■■■ 7.03
Afap1Q80YS6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC54.9■■■■■ 6.38
Afap1Q80YS6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC53.98■■■■■ 6.23
Afap1Q80YS6 Gm24109-201ENSMUST00000175489 103 ntBASIC51.48■■■■■ 5.83
Afap1Q80YS6 Gm15042-201ENSMUST00000120212 883 ntBASIC50.68■■■■■ 5.7
Afap1Q80YS6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC49.83■■■■■ 5.57
Afap1Q80YS6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC49.66■■■■■ 5.54
Afap1Q80YS6 Gm15045-201ENSMUST00000117359 883 ntBASIC49.49■■■■■ 5.51
Afap1Q80YS6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC49.46■■■■■ 5.51
Afap1Q80YS6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC49.3■■■■■ 5.48
Afap1Q80YS6 Gm23366-201ENSMUST00000175022 89 ntBASIC49.07■■■■■ 5.45
Afap1Q80YS6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC48.34■■■■■ 5.33
Afap1Q80YS6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC47.84■■■■■ 5.25
Afap1Q80YS6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC47.82■■■■■ 5.25
Afap1Q80YS6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC47.81■■■■■ 5.24
Afap1Q80YS6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC47.6■■■■■ 5.21
Afap1Q80YS6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC47.42■■■■■ 5.18
Afap1Q80YS6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC47.03■■■■■ 5.12
Afap1Q80YS6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC46.98■■■■■ 5.11
Afap1Q80YS6 Gm25238-201ENSMUST00000174914 89 ntBASIC46.83■■■■■ 5.09
Afap1Q80YS6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC46.79■■■■■ 5.08
Afap1Q80YS6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC46.77■■■■■ 5.08
Afap1Q80YS6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC46.27■■■■■ 5
Afap1Q80YS6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC45.99■■■■■ 4.95
Afap1Q80YS6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC45.8■■■■■ 4.92
Afap1Q80YS6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC45.78■■■■■ 4.92
Afap1Q80YS6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC45.65■■■■■ 4.9
Afap1Q80YS6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC45.48■■■■■ 4.87
Afap1Q80YS6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC45.45■■■■■ 4.87
Afap1Q80YS6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC45.23■■■■■ 4.83
Afap1Q80YS6 Gm25262-201ENSMUST00000174934 133 ntBASIC45.17■■■■■ 4.82
Afap1Q80YS6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC45.14■■■■■ 4.82
Afap1Q80YS6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC45.1■■■■■ 4.81
Afap1Q80YS6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC45.07■■■■■ 4.81
Afap1Q80YS6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC44.86■■■■■ 4.77
Afap1Q80YS6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC44.86■■■■■ 4.77
Afap1Q80YS6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC44.82■■■■■ 4.76
Afap1Q80YS6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC44.7■■■■■ 4.75
Afap1Q80YS6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC44.63■■■■■ 4.74
Afap1Q80YS6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC44.6■■■■■ 4.73
Afap1Q80YS6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC44.55■■■■■ 4.72
Afap1Q80YS6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC44.45■■■■■ 4.71
Afap1Q80YS6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC44.42■■■■■ 4.7
Afap1Q80YS6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC44.39■■■■■ 4.7
Afap1Q80YS6 Gm26115-201ENSMUST00000175605 87 ntBASIC44.38■■■■■ 4.7
Afap1Q80YS6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC44.38■■■■■ 4.7
Afap1Q80YS6 Gm27325-201ENSMUST00000175467 74 ntBASIC44.31■■■■■ 4.68
Afap1Q80YS6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC44.29■■■■■ 4.68
Afap1Q80YS6 Gm8109-201ENSMUST00000194076 746 ntBASIC44.08■■■■■ 4.65
Afap1Q80YS6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC44.06■■■■■ 4.64
Afap1Q80YS6 Rab21-202ENSMUST00000218831 843 ntBASIC43.99■■■■■ 4.63
Afap1Q80YS6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC43.98■■■■■ 4.63
Afap1Q80YS6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC43.91■■■■■ 4.62
Afap1Q80YS6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC43.76■■■■■ 4.6
Afap1Q80YS6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC43.73■■■■■ 4.59
Afap1Q80YS6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC43.66■■■■■ 4.58
Afap1Q80YS6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC43.59■■■■■ 4.57
Afap1Q80YS6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC43.53■■■■■ 4.56
Afap1Q80YS6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC43.51■■■■■ 4.56
Afap1Q80YS6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC43.49■■■■■ 4.55
Afap1Q80YS6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC43.37■■■■■ 4.53
Afap1Q80YS6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC43.32■■■■■ 4.53
Afap1Q80YS6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC43.24■■■■■ 4.51
Afap1Q80YS6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC43.22■■■■■ 4.51
Afap1Q80YS6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC43.13■■■■■ 4.49
Afap1Q80YS6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC43.1■■■■■ 4.49
Afap1Q80YS6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC43.07■■■■■ 4.49
Afap1Q80YS6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC42.88■■■■■ 4.45
Afap1Q80YS6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC42.86■■■■■ 4.45
Afap1Q80YS6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC42.85■■■■■ 4.45
Afap1Q80YS6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC42.76■■■■■ 4.44
Afap1Q80YS6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC42.72■■■■■ 4.43
Afap1Q80YS6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC42.71■■■■■ 4.43
Afap1Q80YS6 Gm17082-201ENSMUST00000166043 1091 ntBASIC42.66■■■■■ 4.42
Afap1Q80YS6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC42.65■■■■■ 4.42
Afap1Q80YS6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC42.62■■■■■ 4.41
Afap1Q80YS6 Gm24804-201ENSMUST00000174982 85 ntBASIC42.59■■■■■ 4.41
Afap1Q80YS6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC42.59■■■■■ 4.41
Afap1Q80YS6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC42.48■■■■■ 4.39
Afap1Q80YS6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC42.35■■■■■ 4.37
Afap1Q80YS6 Psd-208ENSMUST00000224556 2034 ntBASIC42.29■■■■■ 4.36
Afap1Q80YS6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC42.28■■■■■ 4.36
Afap1Q80YS6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC42.22■■■■■ 4.35
Afap1Q80YS6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC42.21■■■■■ 4.35
Afap1Q80YS6 Gm27322-201ENSMUST00000184007 104 ntBASIC42.15■■■■■ 4.34
Afap1Q80YS6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC42.15■■■■■ 4.34
Afap1Q80YS6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC42.11■■■■■ 4.33
Afap1Q80YS6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC42.11■■■■■ 4.33
Afap1Q80YS6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC42.07■■■■■ 4.33
Afap1Q80YS6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC42.03■■■■■ 4.32
Afap1Q80YS6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC42■■■■■ 4.31
Afap1Q80YS6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC41.97■■■■■ 4.31
Afap1Q80YS6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC41.93■■■■■ 4.3
Afap1Q80YS6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC41.91■■■■■ 4.3
Afap1Q80YS6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC41.9■■■■■ 4.3
Afap1Q80YS6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC41.9■■■■■ 4.3
Afap1Q80YS6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC41.81■■■■■ 4.28
Afap1Q80YS6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC41.79■■■■■ 4.28
Afap1Q80YS6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC41.79■■■■■ 4.28
Afap1Q80YS6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC41.77■■■■■ 4.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms