RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	ATG40	Q99325	256 aa		13.06	□□□□□ -0.32
CCC1	YLR220W	Q0297	Q9ZZV8	51 aa		13.06	□□□□□ -0.32
CCC1	YLR220W	YLL053C	P0CD98	152 aa		13.05	□□□□□ -0.32
CCC1	YLR220W	ERG3	P32353	365 aa		13.05	□□□□□ -0.32
CCC1	YLR220W	EDS1	P38073	919 aa		13.05	□□□□□ -0.32
CCC1	YLR220W	YJR011C	P47086	261 aa	Predicted RBP	13.05	□□□□□ -0.32
CCC1	YLR220W	BNA2	P47125	453 aa		13.05	□□□□□ -0.32
CCC1	YLR220W	GEP7	P53171	287 aa		13.05	□□□□□ -0.32
CCC1	YLR220W	GTF1	P53260	183 aa	Predicted RBP	13.05	□□□□□ -0.32
CCC1	YLR220W	DMA2	P53924	522 aa		13.05	□□□□□ -0.32
CCC1	YLR220W	PRM15	Q03262	622 aa		13.05	□□□□□ -0.32
CCC1	YLR220W	YDR114C	Q04597	100 aa		13.05	□□□□□ -0.32
CCC1	YLR220W	LIP2	Q06005	328 aa		13.05	□□□□□ -0.32
CCC1	YLR220W	RDI1	Q12434	202 aa		13.05	□□□□□ -0.32
CCC1	YLR220W	ATG22	P25568	528 aa		13.04	□□□□□ -0.32
CCC1	YLR220W	NTC20	P38302	140 aa	Predicted RBP	13.04	□□□□□ -0.32
CCC1	YLR220W	CTR2	P38865	189 aa		13.04	□□□□□ -0.32
CCC1	YLR220W	XPT1	P47165	209 aa		13.04	□□□□□ -0.32
CCC1	YLR220W	YLR365W	Q7LIF2	110 aa		13.04	□□□□□ -0.32
CCC1	YLR220W	FUS3	P16892	353 aa	Known RBP	13.03	□□□□□ -0.32
CCC1	YLR220W	TRR1	P29509	319 aa	Known RBP	13.03	□□□□□ -0.32
CCC1	YLR220W	RPB7	P34087	171 aa		13.03	□□□□□ -0.32
CCC1	YLR220W	NCA3	P46955	337 aa		13.03	□□□□□ -0.32
CCC1	YLR220W	SOL1	P50278	321 aa		13.03	□□□□□ -0.32
CCC1	YLR220W	ALG9	P53868	555 aa	Known RBP	13.03	□□□□□ -0.32
CCC1	YLR220W	YMR105W-A	Q8TGS8	64 aa		13.03	□□□□□ -0.32
CCC1	YLR220W	BUD23	P25627	275 aa	Predicted RBP	13.02	□□□□□ -0.33
CCC1	YLR220W	YHL044W	P38727	235 aa		13.02	□□□□□ -0.33
CCC1	YLR220W	YIR020C	P40575	100 aa		13.02	□□□□□ -0.33
CCC1	YLR220W	ARG5,6	Q01217	863 aa		13.02	□□□□□ -0.33
CCC1	YLR220W	CAC2	Q04199	468 aa		13.02	□□□□□ -0.33
CCC1	YLR220W	RTR2	Q12378	196 aa		13.02	□□□□□ -0.33
CCC1	YLR220W	RAD52	P06778	471 aa	Known RBP	13.01	□□□□□ -0.33
CCC1	YLR220W	MIR1	P23641	311 aa	Known RBP	13.01	□□□□□ -0.33
CCC1	YLR220W	YCR016W	P25617	290 aa	Known RBP	13.01	□□□□□ -0.33
CCC1	YLR220W	YDR286C	Q05530	114 aa		13.01	□□□□□ -0.33
CCC1	YLR220W	SCM3	Q12334	223 aa		13.01	□□□□□ -0.33
CCC1	YLR220W	SEN2	P16658	377 aa		13	□□□□□ -0.33
CCC1	YLR220W	SLX9	P53251	210 aa	Predicted RBP	13	□□□□□ -0.33
CCC1	YLR220W	NRG1	Q03125	231 aa		13	□□□□□ -0.33
CCC1	YLR220W	YCL048W-A	Q2V2Q2	79 aa		13	□□□□□ -0.33
CCC1	YLR220W	UBA3	Q99344	299 aa		13	□□□□□ -0.33
CCC1	YLR220W	CPR5	P35176	225 aa		12.99	□□□□□ -0.33
CCC1	YLR220W	PAN3	P36102	679 aa	Predicted RBP	12.99	□□□□□ -0.33
CCC1	YLR220W	POP2	P39008	433 aa		12.99	□□□□□ -0.33
CCC1	YLR220W	BMT5	P40493	336 aa		12.99	□□□□□ -0.33
CCC1	YLR220W	SMM1	P53720	384 aa	Known RBP	12.99	□□□□□ -0.33
CCC1	YLR220W	MRPL22	P53881	309 aa		12.99	□□□□□ -0.33
CCC1	YLR220W	SCP1	Q08873	200 aa		12.99	□□□□□ -0.33
CCC1	YLR220W	YOR029W	Q12243	111 aa		12.99	□□□□□ -0.33
CCC1	YLR220W	TRM13	Q12383	476 aa		12.99	□□□□□ -0.33
CCC1	YLR220W	YOR192C-C	Q3E736	78 aa		12.99	□□□□□ -0.33
CCC1	YLR220W	ISC10	P32645	267 aa		12.98	□□□□□ -0.33
CCC1	YLR220W	PPQ1	P32945	549 aa		12.98	□□□□□ -0.33
CCC1	YLR220W	YUH1	P35127	236 aa		12.98	□□□□□ -0.33
CCC1	YLR220W	SWD2	P36104	329 aa	Predicted RBP	12.98	□□□□□ -0.33
CCC1	YLR220W	YNR064C	P53750	290 aa		12.98	□□□□□ -0.33
CCC1	YLR220W	HSK3	P69852	69 aa		12.98	□□□□□ -0.33
CCC1	YLR220W	MRPL13	Q02204	264 aa		12.98	□□□□□ -0.33
CCC1	YLR220W	VBA1	Q04301	562 aa		12.98	□□□□□ -0.33
CCC1	YLR220W	FIT1	Q04433	528 aa		12.98	□□□□□ -0.33
CCC1	YLR220W	MED4	Q12343	284 aa		12.98	□□□□□ -0.33
CCC1	YLR220W	YPR108W-A	Q3E7B3	70 aa		12.98	□□□□□ -0.33
CCC1	YLR220W	PUT1	P09368	476 aa		12.97	□□□□□ -0.33
CCC1	YLR220W	CKA1	P15790	372 aa		12.97	□□□□□ -0.33
CCC1	YLR220W	AIM46	P38885	310 aa		12.97	□□□□□ -0.33
CCC1	YLR220W	OKP1	P53298	406 aa		12.97	□□□□□ -0.33
CCC1	YLR220W	ECM18	Q04623	453 aa		12.97	□□□□□ -0.33
CCC1	YLR220W	POP8	P38208	133 aa		12.96	□□□□□ -0.33
CCC1	YLR220W	GPI18	P38211	433 aa		12.96	□□□□□ -0.33
CCC1	YLR220W	PAC2	P39937	518 aa		12.96	□□□□□ -0.33
CCC1	YLR220W	PIR5	P46999	287 aa		12.96	□□□□□ -0.33
CCC1	YLR220W	INN1	P53901	409 aa		12.96	□□□□□ -0.33
CCC1	YLR220W	ASM4	Q05166	528 aa		12.96	□□□□□ -0.33
CCC1	YLR220W	YOL118C	Q08259	102 aa		12.96	□□□□□ -0.33
CCC1	YLR220W	RFM1	Q12192	310 aa		12.96	□□□□□ -0.33
CCC1	YLR220W	VAM3	Q12241	283 aa		12.96	□□□□□ -0.33
CCC1	YLR220W	RDL1	Q12305	139 aa	Known RBP	12.96	□□□□□ -0.33
CCC1	YLR220W	ARG80	P07249	177 aa		12.95	□□□□□ -0.34
CCC1	YLR220W	RPA34	P47006	233 aa	Predicted RBP	12.95	□□□□□ -0.34
CCC1	YLR220W	NOC4	Q06512	552 aa	Predicted RBP	12.95	□□□□□ -0.34
CCC1	YLR220W	YDL086W	Q07505	273 aa		12.95	□□□□□ -0.34
CCC1	YLR220W	DGK1	Q12382	290 aa		12.95	□□□□□ -0.34
CCC1	YLR220W	DIT1	P21623	536 aa		12.94	□□□□□ -0.34
CCC1	YLR220W	YCL042W	P25572	119 aa		12.94	□□□□□ -0.34
CCC1	YLR220W	MRP17	P28778	131 aa		12.94	□□□□□ -0.34
CCC1	YLR220W	ABM1	P47146	123 aa		12.94	□□□□□ -0.34
CCC1	YLR220W	NIF3	P53081	288 aa		12.94	□□□□□ -0.34
CCC1	YLR220W	RTT103	Q05543	409 aa		12.94	□□□□□ -0.34
CCC1	YLR220W	ALG6	Q12001	544 aa	Known RBP	12.94	□□□□□ -0.34
CCC1	YLR220W	GEP5	Q12393	293 aa		12.94	□□□□□ -0.34
CCC1	YLR220W	SUT1	P53032	299 aa	Known RBP	12.93	□□□□□ -0.34
CCC1	YLR220W	THI74	Q04083	370 aa		12.93	□□□□□ -0.34
CCC1	YLR220W	GDH1	P07262	454 aa	Known RBP	12.92	□□□□□ -0.34
CCC1	YLR220W	ATP10	P18496	279 aa		12.92	□□□□□ -0.34
CCC1	YLR220W	GAR1	P28007	205 aa	Known RBP	12.92	□□□□□ -0.34
CCC1	YLR220W	VMA8	P32610	256 aa	Known RBP	12.92	□□□□□ -0.34
CCC1	YLR220W	IES6	P32617	166 aa		12.92	□□□□□ -0.34
CCC1	YLR220W	RPL21A	Q02753	160 aa	Known RBP	12.92	□□□□□ -0.34
CCC1	YLR220W	RPL21B	Q12672	160 aa	Known RBP	12.92	□□□□□ -0.34

Retrieved 100 of 5,963 RNA–protein pairs in 181.2 ms