Protein–RNA interactions for Protein: Q05166

ASM4, Nucleoporin ASM4, yeastyeast

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ASM4Q05166 NSR1YGR159C 1245 nt16.98■□□□□ 0.31
ASM4Q05166 YML009W-BYML009W-B 477 nt16.91■□□□□ 0.3
ASM4Q05166 NOP1YDL014W 984 nt16.28■□□□□ 0.2
ASM4Q05166 MDJ1YFL016C 1536 nt15.38■□□□□ 0.05
ASM4Q05166 YKL036CYKL036C 393 nt14.8□□□□□ -0.04
ASM4Q05166 SRX1YKL086W 384 nt14.22□□□□□ -0.13
ASM4Q05166 Q0297Q0297 156 nt14.15□□□□□ -0.14
ASM4Q05166 YJL027CYJL027C 417 nt14.14□□□□□ -0.15
ASM4Q05166 YCR051WYCR051W 669 nt13.53□□□□□ -0.24
ASM4Q05166 DBP2YNL112W 1641 nt13.46□□□□□ -0.25
ASM4Q05166 SCS3YGL126W 1143 nt13.33□□□□□ -0.28
ASM4Q05166 YBR190WYBR190W 312 nt13.13□□□□□ -0.31
ASM4Q05166 TRN1tP(UGG)A 72 nt13.01□□□□□ -0.33
ASM4Q05166 SUF9tP(UGG)F 72 nt13.01□□□□□ -0.33
ASM4Q05166 SUF8tP(UGG)H 72 nt13.01□□□□□ -0.33
ASM4Q05166 tP(UGG)LtP(UGG)L 72 nt13.01□□□□□ -0.33
ASM4Q05166 SUF7tP(UGG)M 72 nt13.01□□□□□ -0.33
ASM4Q05166 tP(UGG)N1tP(UGG)N1 72 nt13.01□□□□□ -0.33
ASM4Q05166 tP(UGG)N2tP(UGG)N2 72 nt13.01□□□□□ -0.33
ASM4Q05166 tP(UGG)O1tP(UGG)O1 72 nt13.01□□□□□ -0.33
ASM4Q05166 SUF11tP(UGG)O2 72 nt13.01□□□□□ -0.33
ASM4Q05166 CCC1YLR220W 969 nt12.96□□□□□ -0.33
ASM4Q05166 RTC3YHR087W 336 nt12.88□□□□□ -0.35
ASM4Q05166 SSA3YBL075C 1950 nt12.84□□□□□ -0.35
ASM4Q05166 YOL085CYOL085C 342 nt12.83□□□□□ -0.36
ASM4Q05166 RPP1BYDL130W 321 nt12.72□□□□□ -0.37
ASM4Q05166 PKP1YIL042C 1185 nt12.72□□□□□ -0.37
ASM4Q05166 RVS167YDR388W 1449 nt12.59□□□□□ -0.39
ASM4Q05166 SCJ1YMR214W 1134 nt12.49□□□□□ -0.41
ASM4Q05166 Q0182Q0182 405 nt12.47□□□□□ -0.41
ASM4Q05166 MOT3YMR070W 1473 nt12.29□□□□□ -0.44
ASM4Q05166 PUT4YOR348C 1884 nt12.25□□□□□ -0.45
ASM4Q05166 tP(UGG)O3tP(UGG)O3 72 nt12.25□□□□□ -0.45
ASM4Q05166 PET122YER153C 765 nt12.21□□□□□ -0.45
ASM4Q05166 SHR5YOL110W 714 nt12.09□□□□□ -0.47
ASM4Q05166 SCR1SCR1 522 nt11.99□□□□□ -0.49
ASM4Q05166 URN1YPR152C 1398 nt11.94□□□□□ -0.5
ASM4Q05166 DEP1YAL013W 1218 nt11.91□□□□□ -0.5
ASM4Q05166 ARE1YCR048W 1833 nt11.87□□□□□ -0.51
ASM4Q05166 POA1YBR022W 534 nt11.86□□□□□ -0.51
ASM4Q05166 ATS1YAL020C 1002 nt11.85□□□□□ -0.51
ASM4Q05166 RRN5YLR141W 1092 nt11.84□□□□□ -0.51
ASM4Q05166 SAH1YER043C 1350 nt11.83□□□□□ -0.52
ASM4Q05166 YDJ1YNL064C 1230 nt11.81□□□□□ -0.52
ASM4Q05166 OPI9YLR338W 858 nt11.79□□□□□ -0.52
ASM4Q05166 YHR049C-AYHR049C-A 297 nt11.74□□□□□ -0.53
ASM4Q05166 BSC6YOL137W 1494 nt11.7□□□□□ -0.54
ASM4Q05166 RPN10YHR200W 807 nt11.67□□□□□ -0.54
ASM4Q05166 GAR1YHR089C 618 nt11.66□□□□□ -0.54
ASM4Q05166 YNL208WYNL208W 600 nt11.63□□□□□ -0.55
ASM4Q05166 YER088W-BYER088W-B 147 nt11.59□□□□□ -0.55
ASM4Q05166 RSB1YOR049C 1065 nt11.52□□□□□ -0.57
ASM4Q05166 SPT5YML010W 3192 nt11.51□□□□□ -0.57
ASM4Q05166 BUD23YCR047C 828 nt11.46□□□□□ -0.57
ASM4Q05166 PUN1YLR414C 792 nt11.44□□□□□ -0.58
ASM4Q05166 SSA4YER103W 1929 nt11.43□□□□□ -0.58
ASM4Q05166 PTC2YER089C 1395 nt11.39□□□□□ -0.59
ASM4Q05166 YJR018WYJR018W 363 nt11.37□□□□□ -0.59
ASM4Q05166 TIR1YER011W 765 nt11.26□□□□□ -0.61
ASM4Q05166 NAB2YGL122C 1578 nt11.24□□□□□ -0.61
ASM4Q05166 SSA1YAL005C 1929 nt11.18□□□□□ -0.62
ASM4Q05166 YJR120WYJR120W 351 nt11.12□□□□□ -0.63
ASM4Q05166 FPR4YLR449W 1179 nt11.08□□□□□ -0.64
ASM4Q05166 RPP2BYDR382W 333 nt11.06□□□□□ -0.64
ASM4Q05166 FIS1YIL065C 468 nt11.05□□□□□ -0.64
ASM4Q05166 DAL1YIR027C 1383 nt11.04□□□□□ -0.64
ASM4Q05166 BDF1YLR399C 2061 nt11.03□□□□□ -0.64
ASM4Q05166 MEP2YNL142W 1500 nt11.02□□□□□ -0.65
ASM4Q05166 PST2YDR032C 597 nt11.01□□□□□ -0.65
ASM4Q05166 INM2YDR287W 879 nt10.97□□□□□ -0.65
ASM4Q05166 SRB2YHR041C 633 nt10.96□□□□□ -0.65
ASM4Q05166 PHO4YFR034C 939 nt10.95□□□□□ -0.66
ASM4Q05166 DCW1YKL046C 1350 nt10.87□□□□□ -0.67
ASM4Q05166 TAT1YBR069C 1860 nt10.87□□□□□ -0.67
ASM4Q05166 YBL100CYBL100C 315 nt10.85□□□□□ -0.67
ASM4Q05166 YPS1YLR120C 1710 nt10.82□□□□□ -0.68
ASM4Q05166 BDH2YAL061W 1254 nt10.79□□□□□ -0.68
ASM4Q05166 YHR165W-AYHR165W-A 312 nt10.77□□□□□ -0.69
ASM4Q05166 WWM1YFL010C 636 nt10.74□□□□□ -0.69
ASM4Q05166 FUN26YAL022C 1554 nt10.71□□□□□ -0.69
ASM4Q05166 YDR095CYDR095C 411 nt10.7□□□□□ -0.7
ASM4Q05166 EMI2YDR516C 1503 nt10.68□□□□□ -0.7
ASM4Q05166 YBR220CYBR220C 1683 nt10.67□□□□□ -0.7
ASM4Q05166 YMR090WYMR090W 684 nt10.66□□□□□ -0.7
ASM4Q05166 SHU1YHL006C 453 nt10.65□□□□□ -0.7
ASM4Q05166 TRM9YML014W 840 nt10.65□□□□□ -0.7
ASM4Q05166 PAC11YDR488C 1602 nt10.62□□□□□ -0.71
ASM4Q05166 YAL037C-BYAL037C-B 975 nt10.62□□□□□ -0.71
ASM4Q05166 ALF1YNL148C 765 nt10.62□□□□□ -0.71
ASM4Q05166 LSM3YLR438C-A 270 nt10.59□□□□□ -0.71
ASM4Q05166 YDL221WYDL221W 552 nt10.56□□□□□ -0.72
ASM4Q05166 SDH1YKL148C 1923 nt10.53□□□□□ -0.72
ASM4Q05166 YGR021WYGR021W 873 nt10.53□□□□□ -0.72
ASM4Q05166 CCT6YDR188W 1641 nt10.52□□□□□ -0.73
ASM4Q05166 RPP2AYOL039W 321 nt10.52□□□□□ -0.73
ASM4Q05166 YFL021C-AYFL021C-A 855 nt10.51□□□□□ -0.73
ASM4Q05166 CAC2YML102W 1407 nt10.5□□□□□ -0.73
ASM4Q05166 PTP1YDL230W 1008 nt10.5□□□□□ -0.73
ASM4Q05166 HOM6YJR139C 1080 nt10.5□□□□□ -0.73
ASM4Q05166 SUF2tP(AGG)C 72 nt10.46□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms