Protein–RNA interactions for Protein: P36104

SWD2, COMPASS component SWD2, yeastyeast

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWD2P36104 NSR1YGR159C 1245 nt17.11■□□□□ 0.33
SWD2P36104 YML009W-BYML009W-B 477 nt17.04■□□□□ 0.32
SWD2P36104 NOP1YDL014W 984 nt16.55■□□□□ 0.24
SWD2P36104 MDJ1YFL016C 1536 nt15.52■□□□□ 0.07
SWD2P36104 YKL036CYKL036C 393 nt15.14■□□□□ 0.01
SWD2P36104 SRX1YKL086W 384 nt14.4□□□□□ -0.1
SWD2P36104 Q0297Q0297 156 nt14.38□□□□□ -0.11
SWD2P36104 YJL027CYJL027C 417 nt14.27□□□□□ -0.13
SWD2P36104 YCR051WYCR051W 669 nt13.7□□□□□ -0.22
SWD2P36104 SCS3YGL126W 1143 nt13.69□□□□□ -0.22
SWD2P36104 DBP2YNL112W 1641 nt13.61□□□□□ -0.23
SWD2P36104 YBR190WYBR190W 312 nt13.29□□□□□ -0.28
SWD2P36104 TRN1tP(UGG)A 72 nt13.11□□□□□ -0.31
SWD2P36104 SUF9tP(UGG)F 72 nt13.11□□□□□ -0.31
SWD2P36104 SUF8tP(UGG)H 72 nt13.11□□□□□ -0.31
SWD2P36104 tP(UGG)LtP(UGG)L 72 nt13.11□□□□□ -0.31
SWD2P36104 SUF7tP(UGG)M 72 nt13.11□□□□□ -0.31
SWD2P36104 tP(UGG)N1tP(UGG)N1 72 nt13.11□□□□□ -0.31
SWD2P36104 tP(UGG)N2tP(UGG)N2 72 nt13.11□□□□□ -0.31
SWD2P36104 tP(UGG)O1tP(UGG)O1 72 nt13.11□□□□□ -0.31
SWD2P36104 SUF11tP(UGG)O2 72 nt13.11□□□□□ -0.31
SWD2P36104 YOL085CYOL085C 342 nt13.07□□□□□ -0.32
SWD2P36104 CCC1YLR220W 969 nt12.98□□□□□ -0.33
SWD2P36104 RTC3YHR087W 336 nt12.97□□□□□ -0.33
SWD2P36104 RPP1BYDL130W 321 nt12.92□□□□□ -0.34
SWD2P36104 PKP1YIL042C 1185 nt12.9□□□□□ -0.34
SWD2P36104 RVS167YDR388W 1449 nt12.67□□□□□ -0.38
SWD2P36104 SCJ1YMR214W 1134 nt12.61□□□□□ -0.39
SWD2P36104 SSA3YBL075C 1950 nt12.34□□□□□ -0.43
SWD2P36104 PET122YER153C 765 nt12.34□□□□□ -0.43
SWD2P36104 tP(UGG)O3tP(UGG)O3 72 nt12.34□□□□□ -0.43
SWD2P36104 PUT4YOR348C 1884 nt12.33□□□□□ -0.44
SWD2P36104 SCR1SCR1 522 nt12.27□□□□□ -0.45
SWD2P36104 ATS1YAL020C 1002 nt12.21□□□□□ -0.45
SWD2P36104 SHR5YOL110W 714 nt12.18□□□□□ -0.46
SWD2P36104 URN1YPR152C 1398 nt12.04□□□□□ -0.48
SWD2P36104 ARE1YCR048W 1833 nt12.02□□□□□ -0.49
SWD2P36104 RRN5YLR141W 1092 nt11.98□□□□□ -0.49
SWD2P36104 DEP1YAL013W 1218 nt11.95□□□□□ -0.5
SWD2P36104 SAH1YER043C 1350 nt11.94□□□□□ -0.5
SWD2P36104 OPI9YLR338W 858 nt11.94□□□□□ -0.5
SWD2P36104 YDJ1YNL064C 1230 nt11.93□□□□□ -0.5
SWD2P36104 POA1YBR022W 534 nt11.92□□□□□ -0.5
SWD2P36104 YHR049C-AYHR049C-A 297 nt11.85□□□□□ -0.51
SWD2P36104 RPN10YHR200W 807 nt11.76□□□□□ -0.53
SWD2P36104 RSB1YOR049C 1065 nt11.75□□□□□ -0.53
SWD2P36104 YER088W-BYER088W-B 147 nt11.73□□□□□ -0.53
SWD2P36104 BSC6YOL137W 1494 nt11.72□□□□□ -0.53
SWD2P36104 GAR1YHR089C 618 nt11.71□□□□□ -0.53
SWD2P36104 YNL208WYNL208W 600 nt11.71□□□□□ -0.53
SWD2P36104 PUN1YLR414C 792 nt11.57□□□□□ -0.56
SWD2P36104 BUD23YCR047C 828 nt11.54□□□□□ -0.56
SWD2P36104 PTC2YER089C 1395 nt11.49□□□□□ -0.57
SWD2P36104 YJR018WYJR018W 363 nt11.46□□□□□ -0.57
SWD2P36104 SPT5YML010W 3192 nt11.42□□□□□ -0.58
SWD2P36104 NAB2YGL122C 1578 nt11.37□□□□□ -0.59
SWD2P36104 TIR1YER011W 765 nt11.31□□□□□ -0.6
SWD2P36104 PST2YDR032C 597 nt11.29□□□□□ -0.6
SWD2P36104 YJR120WYJR120W 351 nt11.27□□□□□ -0.61
SWD2P36104 SSA1YAL005C 1929 nt11.25□□□□□ -0.61
SWD2P36104 FIS1YIL065C 468 nt11.22□□□□□ -0.61
SWD2P36104 DAL1YIR027C 1383 nt11.17□□□□□ -0.62
SWD2P36104 SSA4YER103W 1929 nt11.15□□□□□ -0.62
SWD2P36104 RPP2BYDR382W 333 nt11.13□□□□□ -0.63
SWD2P36104 FPR4YLR449W 1179 nt11.13□□□□□ -0.63
SWD2P36104 INM2YDR287W 879 nt11.09□□□□□ -0.63
SWD2P36104 PHO4YFR034C 939 nt11.08□□□□□ -0.64
SWD2P36104 MEP2YNL142W 1500 nt11.04□□□□□ -0.64
SWD2P36104 SRB2YHR041C 633 nt11.03□□□□□ -0.64
SWD2P36104 YPS1YLR120C 1710 nt10.98□□□□□ -0.65
SWD2P36104 YBL100CYBL100C 315 nt10.94□□□□□ -0.66
SWD2P36104 Q0182Q0182 405 nt10.91□□□□□ -0.66
SWD2P36104 SHU1YHL006C 453 nt10.87□□□□□ -0.67
SWD2P36104 YKL097CYKL097C 411 nt10.87□□□□□ -0.67
SWD2P36104 BDH2YAL061W 1254 nt10.87□□□□□ -0.67
SWD2P36104 DCW1YKL046C 1350 nt10.87□□□□□ -0.67
SWD2P36104 YDR095CYDR095C 411 nt10.86□□□□□ -0.67
SWD2P36104 YHR165W-AYHR165W-A 312 nt10.86□□□□□ -0.67
SWD2P36104 FUN26YAL022C 1554 nt10.81□□□□□ -0.68
SWD2P36104 WWM1YFL010C 636 nt10.77□□□□□ -0.69
SWD2P36104 BDF1YLR399C 2061 nt10.75□□□□□ -0.69
SWD2P36104 YGR021WYGR021W 873 nt10.74□□□□□ -0.69
SWD2P36104 YAL037C-BYAL037C-B 975 nt10.74□□□□□ -0.69
SWD2P36104 EMI2YDR516C 1503 nt10.71□□□□□ -0.69
SWD2P36104 TRM9YML014W 840 nt10.71□□□□□ -0.69
SWD2P36104 ALF1YNL148C 765 nt10.69□□□□□ -0.7
SWD2P36104 PTP1YDL230W 1008 nt10.67□□□□□ -0.7
SWD2P36104 LSM3YLR438C-A 270 nt10.67□□□□□ -0.7
SWD2P36104 RPP2AYOL039W 321 nt10.65□□□□□ -0.7
SWD2P36104 CAC2YML102W 1407 nt10.64□□□□□ -0.71
SWD2P36104 CCT6YDR188W 1641 nt10.63□□□□□ -0.71
SWD2P36104 YFL021C-AYFL021C-A 855 nt10.63□□□□□ -0.71
SWD2P36104 HOM6YJR139C 1080 nt10.63□□□□□ -0.71
SWD2P36104 YMR090WYMR090W 684 nt10.62□□□□□ -0.71
SWD2P36104 YBR220CYBR220C 1683 nt10.61□□□□□ -0.71
SWD2P36104 TAT1YBR069C 1860 nt10.6□□□□□ -0.71
SWD2P36104 YDL221WYDL221W 552 nt10.6□□□□□ -0.71
SWD2P36104 MNP1YGL068W 585 nt10.58□□□□□ -0.72
SWD2P36104 SIS1YNL007C 1059 nt10.57□□□□□ -0.72
SWD2P36104 SUF2tP(AGG)C 72 nt10.54□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms