Protein–RNA interactions for Protein: Q99344

UBA3, NEDD8-activating enzyme E1 catalytic subunit, yeastyeast

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBA3Q99344 NSR1YGR159C 1245 nt17.26■□□□□ 0.35
UBA3Q99344 YML009W-BYML009W-B 477 nt17.02■□□□□ 0.32
UBA3Q99344 NOP1YDL014W 984 nt16.44■□□□□ 0.22
UBA3Q99344 MDJ1YFL016C 1536 nt15.62■□□□□ 0.09
UBA3Q99344 YKL036CYKL036C 393 nt14.82□□□□□ -0.04
UBA3Q99344 YJL027CYJL027C 417 nt14.41□□□□□ -0.1
UBA3Q99344 SRX1YKL086W 384 nt14.35□□□□□ -0.11
UBA3Q99344 Q0297Q0297 156 nt14.27□□□□□ -0.13
UBA3Q99344 DBP2YNL112W 1641 nt13.67□□□□□ -0.22
UBA3Q99344 YCR051WYCR051W 669 nt13.56□□□□□ -0.24
UBA3Q99344 YBR190WYBR190W 312 nt13.45□□□□□ -0.26
UBA3Q99344 SCS3YGL126W 1143 nt13.28□□□□□ -0.28
UBA3Q99344 TRN1tP(UGG)A 72 nt13.18□□□□□ -0.3
UBA3Q99344 SUF9tP(UGG)F 72 nt13.18□□□□□ -0.3
UBA3Q99344 SUF8tP(UGG)H 72 nt13.18□□□□□ -0.3
UBA3Q99344 tP(UGG)LtP(UGG)L 72 nt13.18□□□□□ -0.3
UBA3Q99344 SUF7tP(UGG)M 72 nt13.18□□□□□ -0.3
UBA3Q99344 tP(UGG)N1tP(UGG)N1 72 nt13.18□□□□□ -0.3
UBA3Q99344 tP(UGG)N2tP(UGG)N2 72 nt13.18□□□□□ -0.3
UBA3Q99344 tP(UGG)O1tP(UGG)O1 72 nt13.18□□□□□ -0.3
UBA3Q99344 SUF11tP(UGG)O2 72 nt13.18□□□□□ -0.3
UBA3Q99344 RTC3YHR087W 336 nt13.1□□□□□ -0.31
UBA3Q99344 CCC1YLR220W 969 nt13□□□□□ -0.33
UBA3Q99344 YOL085CYOL085C 342 nt12.83□□□□□ -0.36
UBA3Q99344 RVS167YDR388W 1449 nt12.82□□□□□ -0.36
UBA3Q99344 RPP1BYDL130W 321 nt12.79□□□□□ -0.36
UBA3Q99344 SCJ1YMR214W 1134 nt12.65□□□□□ -0.38
UBA3Q99344 PKP1YIL042C 1185 nt12.64□□□□□ -0.39
UBA3Q99344 SSA3YBL075C 1950 nt12.47□□□□□ -0.41
UBA3Q99344 PUT4YOR348C 1884 nt12.46□□□□□ -0.42
UBA3Q99344 tP(UGG)O3tP(UGG)O3 72 nt12.34□□□□□ -0.43
UBA3Q99344 SHR5YOL110W 714 nt12.29□□□□□ -0.44
UBA3Q99344 PET122YER153C 765 nt12.25□□□□□ -0.45
UBA3Q99344 URN1YPR152C 1398 nt12.15□□□□□ -0.46
UBA3Q99344 ARE1YCR048W 1833 nt12.12□□□□□ -0.47
UBA3Q99344 OPI9YLR338W 858 nt12.05□□□□□ -0.48
UBA3Q99344 SCR1SCR1 522 nt12.05□□□□□ -0.48
UBA3Q99344 POA1YBR022W 534 nt12.04□□□□□ -0.48
UBA3Q99344 SAH1YER043C 1350 nt12.04□□□□□ -0.48
UBA3Q99344 DEP1YAL013W 1218 nt12□□□□□ -0.49
UBA3Q99344 YHR049C-AYHR049C-A 297 nt11.98□□□□□ -0.49
UBA3Q99344 YDJ1YNL064C 1230 nt11.97□□□□□ -0.49
UBA3Q99344 RPN10YHR200W 807 nt11.92□□□□□ -0.5
UBA3Q99344 BSC6YOL137W 1494 nt11.86□□□□□ -0.51
UBA3Q99344 RRN5YLR141W 1092 nt11.85□□□□□ -0.51
UBA3Q99344 YNL208WYNL208W 600 nt11.83□□□□□ -0.52
UBA3Q99344 ATS1YAL020C 1002 nt11.77□□□□□ -0.53
UBA3Q99344 GAR1YHR089C 618 nt11.72□□□□□ -0.53
UBA3Q99344 PUN1YLR414C 792 nt11.72□□□□□ -0.53
UBA3Q99344 BUD23YCR047C 828 nt11.66□□□□□ -0.54
UBA3Q99344 YER088W-BYER088W-B 147 nt11.62□□□□□ -0.55
UBA3Q99344 PTC2YER089C 1395 nt11.6□□□□□ -0.55
UBA3Q99344 YJR018WYJR018W 363 nt11.57□□□□□ -0.56
UBA3Q99344 SPT5YML010W 3192 nt11.53□□□□□ -0.56
UBA3Q99344 NAB2YGL122C 1578 nt11.51□□□□□ -0.57
UBA3Q99344 RSB1YOR049C 1065 nt11.51□□□□□ -0.57
UBA3Q99344 TIR1YER011W 765 nt11.35□□□□□ -0.59
UBA3Q99344 FIS1YIL065C 468 nt11.32□□□□□ -0.6
UBA3Q99344 SSA4YER103W 1929 nt11.31□□□□□ -0.6
UBA3Q99344 YJR120WYJR120W 351 nt11.3□□□□□ -0.6
UBA3Q99344 DAL1YIR027C 1383 nt11.29□□□□□ -0.6
UBA3Q99344 SSA1YAL005C 1929 nt11.27□□□□□ -0.6
UBA3Q99344 RPP2BYDR382W 333 nt11.26□□□□□ -0.61
UBA3Q99344 FPR4YLR449W 1179 nt11.24□□□□□ -0.61
UBA3Q99344 INM2YDR287W 879 nt11.22□□□□□ -0.61
UBA3Q99344 PHO4YFR034C 939 nt11.19□□□□□ -0.62
UBA3Q99344 Q0182Q0182 405 nt11.18□□□□□ -0.62
UBA3Q99344 MEP2YNL142W 1500 nt11.18□□□□□ -0.62
UBA3Q99344 YPS1YLR120C 1710 nt11.09□□□□□ -0.63
UBA3Q99344 YBL100CYBL100C 315 nt11.04□□□□□ -0.64
UBA3Q99344 YHR165W-AYHR165W-A 312 nt11□□□□□ -0.65
UBA3Q99344 YDR095CYDR095C 411 nt10.99□□□□□ -0.65
UBA3Q99344 SRB2YHR041C 633 nt10.99□□□□□ -0.65
UBA3Q99344 DCW1YKL046C 1350 nt10.96□□□□□ -0.65
UBA3Q99344 PST2YDR032C 597 nt10.96□□□□□ -0.65
UBA3Q99344 BDH2YAL061W 1254 nt10.96□□□□□ -0.65
UBA3Q99344 BDF1YLR399C 2061 nt10.89□□□□□ -0.67
UBA3Q99344 FUN26YAL022C 1554 nt10.89□□□□□ -0.67
UBA3Q99344 EMI2YDR516C 1503 nt10.84□□□□□ -0.67
UBA3Q99344 ALF1YNL148C 765 nt10.83□□□□□ -0.68
UBA3Q99344 YMR090WYMR090W 684 nt10.82□□□□□ -0.68
UBA3Q99344 TRM9YML014W 840 nt10.81□□□□□ -0.68
UBA3Q99344 WWM1YFL010C 636 nt10.78□□□□□ -0.68
UBA3Q99344 RPP2AYOL039W 321 nt10.77□□□□□ -0.69
UBA3Q99344 LSM3YLR438C-A 270 nt10.76□□□□□ -0.69
UBA3Q99344 TAT1YBR069C 1860 nt10.76□□□□□ -0.69
UBA3Q99344 PTP1YDL230W 1008 nt10.75□□□□□ -0.69
UBA3Q99344 YBR220CYBR220C 1683 nt10.75□□□□□ -0.69
UBA3Q99344 YDL221WYDL221W 552 nt10.74□□□□□ -0.69
UBA3Q99344 CCT6YDR188W 1641 nt10.73□□□□□ -0.69
UBA3Q99344 CAC2YML102W 1407 nt10.7□□□□□ -0.7
UBA3Q99344 SUF2tP(AGG)C 72 nt10.68□□□□□ -0.7
UBA3Q99344 SUF10tP(AGG)N 72 nt10.68□□□□□ -0.7
UBA3Q99344 YFL021C-AYFL021C-A 855 nt10.66□□□□□ -0.7
UBA3Q99344 YGR021WYGR021W 873 nt10.66□□□□□ -0.7
UBA3Q99344 SIS1YNL007C 1059 nt10.66□□□□□ -0.7
UBA3Q99344 SDH1YKL148C 1923 nt10.66□□□□□ -0.7
UBA3Q99344 SHU1YHL006C 453 nt10.59□□□□□ -0.71
UBA3Q99344 HOM6YJR139C 1080 nt10.58□□□□□ -0.72
UBA3Q99344 IRC15YPL017C 1500 nt10.56□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms