Protein–RNA interactions for Protein: Q08873

SCP1, Transgelin, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SCP1Q08873 NSR1YGR159C 1245 nt17.24■□□□□ 0.35
SCP1Q08873 YML009W-BYML009W-B 477 nt16.97■□□□□ 0.31
SCP1Q08873 NOP1YDL014W 984 nt16.38■□□□□ 0.21
SCP1Q08873 MDJ1YFL016C 1536 nt15.63■□□□□ 0.09
SCP1Q08873 YKL036CYKL036C 393 nt14.7□□□□□ -0.06
SCP1Q08873 YJL027CYJL027C 417 nt14.44□□□□□ -0.1
SCP1Q08873 SRX1YKL086W 384 nt14.27□□□□□ -0.13
SCP1Q08873 Q0297Q0297 156 nt14.17□□□□□ -0.14
SCP1Q08873 SSA3YBL075C 1950 nt13.71□□□□□ -0.21
SCP1Q08873 DBP2YNL112W 1641 nt13.65□□□□□ -0.22
SCP1Q08873 YCR051WYCR051W 669 nt13.51□□□□□ -0.25
SCP1Q08873 YBR190WYBR190W 312 nt13.48□□□□□ -0.25
SCP1Q08873 RTC3YHR087W 336 nt13.16□□□□□ -0.3
SCP1Q08873 SCS3YGL126W 1143 nt13.14□□□□□ -0.31
SCP1Q08873 TRN1tP(UGG)A 72 nt13.13□□□□□ -0.31
SCP1Q08873 SUF9tP(UGG)F 72 nt13.13□□□□□ -0.31
SCP1Q08873 SUF8tP(UGG)H 72 nt13.13□□□□□ -0.31
SCP1Q08873 tP(UGG)LtP(UGG)L 72 nt13.13□□□□□ -0.31
SCP1Q08873 SUF7tP(UGG)M 72 nt13.13□□□□□ -0.31
SCP1Q08873 tP(UGG)N1tP(UGG)N1 72 nt13.13□□□□□ -0.31
SCP1Q08873 tP(UGG)N2tP(UGG)N2 72 nt13.13□□□□□ -0.31
SCP1Q08873 tP(UGG)O1tP(UGG)O1 72 nt13.13□□□□□ -0.31
SCP1Q08873 SUF11tP(UGG)O2 72 nt13.13□□□□□ -0.31
SCP1Q08873 CCC1YLR220W 969 nt12.99□□□□□ -0.33
SCP1Q08873 RVS167YDR388W 1449 nt12.83□□□□□ -0.36
SCP1Q08873 YOL085CYOL085C 342 nt12.73□□□□□ -0.37
SCP1Q08873 RPP1BYDL130W 321 nt12.72□□□□□ -0.37
SCP1Q08873 SCJ1YMR214W 1134 nt12.6□□□□□ -0.39
SCP1Q08873 PKP1YIL042C 1185 nt12.56□□□□□ -0.4
SCP1Q08873 PUT4YOR348C 1884 nt12.51□□□□□ -0.41
SCP1Q08873 tP(UGG)O3tP(UGG)O3 72 nt12.29□□□□□ -0.44
SCP1Q08873 SHR5YOL110W 714 nt12.27□□□□□ -0.45
SCP1Q08873 PET122YER153C 765 nt12.18□□□□□ -0.46
SCP1Q08873 URN1YPR152C 1398 nt12.16□□□□□ -0.46
SCP1Q08873 ARE1YCR048W 1833 nt12.16□□□□□ -0.46
SCP1Q08873 POA1YBR022W 534 nt12.09□□□□□ -0.47
SCP1Q08873 SAH1YER043C 1350 nt12.07□□□□□ -0.48
SCP1Q08873 OPI9YLR338W 858 nt12.06□□□□□ -0.48
SCP1Q08873 SPT5YML010W 3192 nt12.03□□□□□ -0.48
SCP1Q08873 YHR049C-AYHR049C-A 297 nt12.02□□□□□ -0.49
SCP1Q08873 DEP1YAL013W 1218 nt12.01□□□□□ -0.49
SCP1Q08873 SCR1SCR1 522 nt11.99□□□□□ -0.49
SCP1Q08873 RPN10YHR200W 807 nt11.93□□□□□ -0.5
SCP1Q08873 SSA4YER103W 1929 nt11.92□□□□□ -0.5
SCP1Q08873 YDJ1YNL064C 1230 nt11.92□□□□□ -0.5
SCP1Q08873 BSC6YOL137W 1494 nt11.91□□□□□ -0.5
SCP1Q08873 YNL208WYNL208W 600 nt11.83□□□□□ -0.52
SCP1Q08873 RRN5YLR141W 1092 nt11.78□□□□□ -0.52
SCP1Q08873 PUN1YLR414C 792 nt11.73□□□□□ -0.53
SCP1Q08873 BUD23YCR047C 828 nt11.71□□□□□ -0.53
SCP1Q08873 GAR1YHR089C 618 nt11.69□□□□□ -0.54
SCP1Q08873 ATS1YAL020C 1002 nt11.65□□□□□ -0.54
SCP1Q08873 PTC2YER089C 1395 nt11.64□□□□□ -0.55
SCP1Q08873 BDF1YLR399C 2061 nt11.63□□□□□ -0.55
SCP1Q08873 YJR018WYJR018W 363 nt11.57□□□□□ -0.56
SCP1Q08873 YER088W-BYER088W-B 147 nt11.56□□□□□ -0.56
SCP1Q08873 NAB2YGL122C 1578 nt11.55□□□□□ -0.56
SCP1Q08873 TAT1YBR069C 1860 nt11.44□□□□□ -0.58
SCP1Q08873 RSB1YOR049C 1065 nt11.43□□□□□ -0.58
SCP1Q08873 PAC11YDR488C 1602 nt11.41□□□□□ -0.58
SCP1Q08873 DAL1YIR027C 1383 nt11.32□□□□□ -0.6
SCP1Q08873 TIR1YER011W 765 nt11.32□□□□□ -0.6
SCP1Q08873 FIS1YIL065C 468 nt11.32□□□□□ -0.6
SCP1Q08873 FPR4YLR449W 1179 nt11.28□□□□□ -0.6
SCP1Q08873 RPP2BYDR382W 333 nt11.27□□□□□ -0.61
SCP1Q08873 YJR120WYJR120W 351 nt11.26□□□□□ -0.61
SCP1Q08873 NVJ2YPR091C 2313 nt11.25□□□□□ -0.61
SCP1Q08873 INM2YDR287W 879 nt11.24□□□□□ -0.61
SCP1Q08873 SSA1YAL005C 1929 nt11.24□□□□□ -0.61
SCP1Q08873 MEP2YNL142W 1500 nt11.24□□□□□ -0.61
SCP1Q08873 PHO4YFR034C 939 nt11.21□□□□□ -0.61
SCP1Q08873 YPS1YLR120C 1710 nt11.12□□□□□ -0.63
SCP1Q08873 YHR165W-AYHR165W-A 312 nt11.05□□□□□ -0.64
SCP1Q08873 YBL100CYBL100C 315 nt11.05□□□□□ -0.64
SCP1Q08873 DCW1YKL046C 1350 nt11.01□□□□□ -0.65
SCP1Q08873 YDR095CYDR095C 411 nt10.99□□□□□ -0.65
SCP1Q08873 BDH2YAL061W 1254 nt10.95□□□□□ -0.66
SCP1Q08873 SRB2YHR041C 633 nt10.93□□□□□ -0.66
SCP1Q08873 YMR090WYMR090W 684 nt10.9□□□□□ -0.66
SCP1Q08873 FUN26YAL022C 1554 nt10.9□□□□□ -0.67
SCP1Q08873 EMI2YDR516C 1503 nt10.89□□□□□ -0.67
SCP1Q08873 YBR220CYBR220C 1683 nt10.89□□□□□ -0.67
SCP1Q08873 ALF1YNL148C 765 nt10.86□□□□□ -0.67
SCP1Q08873 PST2YDR032C 597 nt10.85□□□□□ -0.67
SCP1Q08873 FPS1YLL043W 2010 nt10.84□□□□□ -0.67
SCP1Q08873 TRM9YML014W 840 nt10.82□□□□□ -0.68
SCP1Q08873 RPP2AYOL039W 321 nt10.8□□□□□ -0.68
SCP1Q08873 YDL221WYDL221W 552 nt10.79□□□□□ -0.68
SCP1Q08873 PTP1YDL230W 1008 nt10.76□□□□□ -0.69
SCP1Q08873 LSM3YLR438C-A 270 nt10.75□□□□□ -0.69
SCP1Q08873 WWM1YFL010C 636 nt10.74□□□□□ -0.69
SCP1Q08873 CAC2YML102W 1407 nt10.74□□□□□ -0.69
SCP1Q08873 CCT6YDR188W 1641 nt10.73□□□□□ -0.69
SCP1Q08873 SDH1YKL148C 1923 nt10.72□□□□□ -0.69
SCP1Q08873 GUT2YIL155C 1950 nt10.7□□□□□ -0.7
SCP1Q08873 PCH2YBR186W 1695 nt10.7□□□□□ -0.7
SCP1Q08873 SUF2tP(AGG)C 72 nt10.7□□□□□ -0.7
SCP1Q08873 SUF10tP(AGG)N 72 nt10.7□□□□□ -0.7
SCP1Q08873 SIS1YNL007C 1059 nt10.67□□□□□ -0.7
SCP1Q08873 YFL021C-AYFL021C-A 855 nt10.61□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms