Protein–RNA interactions for Protein: P34087

RPB7, DNA-directed RNA polymerase II subunit RPB7, yeastyeast

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB7P34087 NSR1YGR159C 1245 nt17.16■□□□□ 0.34
RPB7P34087 YML009W-BYML009W-B 477 nt17.03■□□□□ 0.32
RPB7P34087 NOP1YDL014W 984 nt16.44■□□□□ 0.22
RPB7P34087 MDJ1YFL016C 1536 nt15.49■□□□□ 0.07
RPB7P34087 YKL036CYKL036C 393 nt14.92□□□□□ -0.02
RPB7P34087 SRX1YKL086W 384 nt14.36□□□□□ -0.11
RPB7P34087 Q0297Q0297 156 nt14.31□□□□□ -0.12
RPB7P34087 YJL027CYJL027C 417 nt14.27□□□□□ -0.13
RPB7P34087 YCR051WYCR051W 669 nt13.62□□□□□ -0.23
RPB7P34087 DBP2YNL112W 1641 nt13.6□□□□□ -0.23
RPB7P34087 SCS3YGL126W 1143 nt13.44□□□□□ -0.26
RPB7P34087 YBR190WYBR190W 312 nt13.28□□□□□ -0.28
RPB7P34087 TRN1tP(UGG)A 72 nt13.14□□□□□ -0.31
RPB7P34087 SUF9tP(UGG)F 72 nt13.14□□□□□ -0.31
RPB7P34087 SUF8tP(UGG)H 72 nt13.14□□□□□ -0.31
RPB7P34087 tP(UGG)LtP(UGG)L 72 nt13.14□□□□□ -0.31
RPB7P34087 SUF7tP(UGG)M 72 nt13.14□□□□□ -0.31
RPB7P34087 tP(UGG)N1tP(UGG)N1 72 nt13.14□□□□□ -0.31
RPB7P34087 tP(UGG)N2tP(UGG)N2 72 nt13.14□□□□□ -0.31
RPB7P34087 tP(UGG)O1tP(UGG)O1 72 nt13.14□□□□□ -0.31
RPB7P34087 SUF11tP(UGG)O2 72 nt13.14□□□□□ -0.31
RPB7P34087 CCC1YLR220W 969 nt13.03□□□□□ -0.32
RPB7P34087 RTC3YHR087W 336 nt12.98□□□□□ -0.33
RPB7P34087 YOL085CYOL085C 342 nt12.94□□□□□ -0.34
RPB7P34087 RPP1BYDL130W 321 nt12.84□□□□□ -0.35
RPB7P34087 PKP1YIL042C 1185 nt12.78□□□□□ -0.36
RPB7P34087 RVS167YDR388W 1449 nt12.71□□□□□ -0.37
RPB7P34087 SCJ1YMR214W 1134 nt12.59□□□□□ -0.39
RPB7P34087 tP(UGG)O3tP(UGG)O3 72 nt12.35□□□□□ -0.43
RPB7P34087 PET122YER153C 765 nt12.3□□□□□ -0.44
RPB7P34087 PUT4YOR348C 1884 nt12.26□□□□□ -0.45
RPB7P34087 SHR5YOL110W 714 nt12.2□□□□□ -0.46
RPB7P34087 SCR1SCR1 522 nt12.09□□□□□ -0.47
RPB7P34087 SSA3YBL075C 1950 nt12.08□□□□□ -0.48
RPB7P34087 URN1YPR152C 1398 nt12.05□□□□□ -0.48
RPB7P34087 DEP1YAL013W 1218 nt11.97□□□□□ -0.49
RPB7P34087 ARE1YCR048W 1833 nt11.96□□□□□ -0.49
RPB7P34087 ATS1YAL020C 1002 nt11.95□□□□□ -0.5
RPB7P34087 YDJ1YNL064C 1230 nt11.95□□□□□ -0.5
RPB7P34087 RRN5YLR141W 1092 nt11.93□□□□□ -0.5
RPB7P34087 SAH1YER043C 1350 nt11.92□□□□□ -0.5
RPB7P34087 OPI9YLR338W 858 nt11.92□□□□□ -0.5
RPB7P34087 POA1YBR022W 534 nt11.86□□□□□ -0.51
RPB7P34087 YHR049C-AYHR049C-A 297 nt11.8□□□□□ -0.52
RPB7P34087 RPN10YHR200W 807 nt11.79□□□□□ -0.52
RPB7P34087 YNL208WYNL208W 600 nt11.74□□□□□ -0.53
RPB7P34087 GAR1YHR089C 618 nt11.73□□□□□ -0.53
RPB7P34087 YER088W-BYER088W-B 147 nt11.69□□□□□ -0.54
RPB7P34087 BSC6YOL137W 1494 nt11.65□□□□□ -0.54
RPB7P34087 RSB1YOR049C 1065 nt11.59□□□□□ -0.55
RPB7P34087 PUN1YLR414C 792 nt11.57□□□□□ -0.56
RPB7P34087 BUD23YCR047C 828 nt11.52□□□□□ -0.57
RPB7P34087 YJR018WYJR018W 363 nt11.48□□□□□ -0.57
RPB7P34087 PTC2YER089C 1395 nt11.48□□□□□ -0.57
RPB7P34087 NAB2YGL122C 1578 nt11.37□□□□□ -0.59
RPB7P34087 TIR1YER011W 765 nt11.35□□□□□ -0.59
RPB7P34087 SPT5YML010W 3192 nt11.3□□□□□ -0.6
RPB7P34087 SSA1YAL005C 1929 nt11.27□□□□□ -0.6
RPB7P34087 YJR120WYJR120W 351 nt11.24□□□□□ -0.61
RPB7P34087 DAL1YIR027C 1383 nt11.16□□□□□ -0.62
RPB7P34087 RPP2BYDR382W 333 nt11.16□□□□□ -0.62
RPB7P34087 FIS1YIL065C 468 nt11.16□□□□□ -0.62
RPB7P34087 FPR4YLR449W 1179 nt11.14□□□□□ -0.63
RPB7P34087 PST2YDR032C 597 nt11.11□□□□□ -0.63
RPB7P34087 INM2YDR287W 879 nt11.1□□□□□ -0.63
RPB7P34087 PHO4YFR034C 939 nt11.06□□□□□ -0.64
RPB7P34087 SRB2YHR041C 633 nt11.03□□□□□ -0.64
RPB7P34087 SSA4YER103W 1929 nt11.01□□□□□ -0.65
RPB7P34087 MEP2YNL142W 1500 nt10.96□□□□□ -0.65
RPB7P34087 YBL100CYBL100C 315 nt10.94□□□□□ -0.66
RPB7P34087 YPS1YLR120C 1710 nt10.94□□□□□ -0.66
RPB7P34087 BDH2YAL061W 1254 nt10.9□□□□□ -0.66
RPB7P34087 YHR165W-AYHR165W-A 312 nt10.83□□□□□ -0.68
RPB7P34087 YDR095CYDR095C 411 nt10.82□□□□□ -0.68
RPB7P34087 FUN26YAL022C 1554 nt10.82□□□□□ -0.68
RPB7P34087 WWM1YFL010C 636 nt10.81□□□□□ -0.68
RPB7P34087 DCW1YKL046C 1350 nt10.8□□□□□ -0.68
RPB7P34087 TRM9YML014W 840 nt10.75□□□□□ -0.69
RPB7P34087 SHU1YHL006C 453 nt10.73□□□□□ -0.69
RPB7P34087 ALF1YNL148C 765 nt10.71□□□□□ -0.69
RPB7P34087 LSM3YLR438C-A 270 nt10.7□□□□□ -0.7
RPB7P34087 YAL037C-BYAL037C-B 975 nt10.66□□□□□ -0.7
RPB7P34087 EMI2YDR516C 1503 nt10.65□□□□□ -0.7
RPB7P34087 YGR021WYGR021W 873 nt10.65□□□□□ -0.7
RPB7P34087 CCT6YDR188W 1641 nt10.64□□□□□ -0.71
RPB7P34087 YFL021C-AYFL021C-A 855 nt10.63□□□□□ -0.71
RPB7P34087 RPP2AYOL039W 321 nt10.63□□□□□ -0.71
RPB7P34087 PTP1YDL230W 1008 nt10.62□□□□□ -0.71
RPB7P34087 BDF1YLR399C 2061 nt10.61□□□□□ -0.71
RPB7P34087 HOM6YJR139C 1080 nt10.6□□□□□ -0.71
RPB7P34087 YMR090WYMR090W 684 nt10.59□□□□□ -0.71
RPB7P34087 CAC2YML102W 1407 nt10.58□□□□□ -0.72
RPB7P34087 SUF2tP(AGG)C 72 nt10.57□□□□□ -0.72
RPB7P34087 SUF10tP(AGG)N 72 nt10.57□□□□□ -0.72
RPB7P34087 SIS1YNL007C 1059 nt10.55□□□□□ -0.72
RPB7P34087 YDL221WYDL221W 552 nt10.54□□□□□ -0.72
RPB7P34087 YBR220CYBR220C 1683 nt10.53□□□□□ -0.72
RPB7P34087 MNP1YGL068W 585 nt10.52□□□□□ -0.73
RPB7P34087 YKL097CYKL097C 411 nt10.52□□□□□ -0.73
RPB7P34087 SDH1YKL148C 1923 nt10.46□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms