RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W INM2Q05533 292 aa1.68□□□□□ -2.14
RSM28YDR494W YLR173WQ06247 608 aa1.68□□□□□ -2.14
RSM28YDR494W YPR172WQ06608 200 aa1.68□□□□□ -2.14
RSM28YDR494W YPL257WQ08974 193 aa1.68□□□□□ -2.14
RSM28YDR494W BOL1Q3E793 110 aa1.68□□□□□ -2.14
RSM28YDR494W INO80P53115 1489 aa1.68□□□□□ -2.14
RSM28YDR494W COX5AP00424 153 aa1.67□□□□□ -2.14
RSM28YDR494W FIS1P40515 155 aa1.67□□□□□ -2.14
RSM28YDR494W YFR054CP43622 192 aa1.67□□□□□ -2.14
RSM28YDR494W JHD2P47156 728 aaPredicted RBP1.67□□□□□ -2.14
RSM28YDR494W YNL046WP53956 172 aa1.67□□□□□ -2.14
RSM28YDR494W ATO3Q12359 275 aa1.67□□□□□ -2.14
RSM28YDR494W DSF1P0CX08 502 aa1.66□□□□□ -2.14
RSM28YDR494W YNR073CP0CX09 502 aa1.66□□□□□ -2.14
RSM28YDR494W TCP1P12612 559 aaKnown RBP1.66□□□□□ -2.14
RSM28YDR494W YJR079WP47126 109 aa1.66□□□□□ -2.14
RSM28YDR494W PAM18Q07914 168 aa1.66□□□□□ -2.14
RSM28YDR494W MED4Q12343 284 aa1.66□□□□□ -2.14
RSM28YDR494W HTL1Q9URQ5 78 aa1.66□□□□□ -2.14
RSM28YDR494W FBA1P14540 359 aaKnown RBP1.65□□□□□ -2.15
RSM28YDR494W PEX4P29340 183 aa1.65□□□□□ -2.15
RSM28YDR494W CTR2P38865 189 aa1.65□□□□□ -2.15
RSM28YDR494W LSM4P40070 187 aaKnown RBP1.65□□□□□ -2.15
RSM28YDR494W YMR144WP40214 342 aaKnown RBP1.65□□□□□ -2.15
RSM28YDR494W SEI1Q06058 285 aa1.65□□□□□ -2.15
RSM28YDR494W ATG39Q06159 398 aa1.65□□□□□ -2.15
RSM28YDR494W ATG31Q12421 196 aa1.65□□□□□ -2.15
RSM28YDR494W RPL9AP05738 191 aaKnown RBP1.64□□□□□ -2.15
RSM28YDR494W MDH3P32419 343 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
RSM28YDR494W YPT52P36018 234 aaKnown RBP1.64□□□□□ -2.15
RSM28YDR494W DOG1P38774 246 aa1.64□□□□□ -2.15
RSM28YDR494W YAR068WP39564 161 aa1.64□□□□□ -2.15
RSM28YDR494W AYR1P40471 297 aa1.64□□□□□ -2.15
RSM28YDR494W CIS3P47001 227 aa1.64□□□□□ -2.15
RSM28YDR494W HOC1P47124 396 aa1.64□□□□□ -2.15
RSM28YDR494W RPL9BP51401 191 aaKnown RBP1.64□□□□□ -2.15
RSM28YDR494W YGR219WP53307 113 aa1.64□□□□□ -2.15
RSM28YDR494W MRPS8Q03799 155 aa1.64□□□□□ -2.15
RSM28YDR494W YLR126CQ12288 251 aa1.64□□□□□ -2.15
RSM28YDR494W SIR4P11978 1358 aa1.63□□□□□ -2.15
RSM28YDR494W RAS2P01120 322 aaKnown RBP1.63□□□□□ -2.15
RSM28YDR494W SNA3P14359 133 aa1.63□□□□□ -2.15
RSM28YDR494W ERD2P18414 219 aa1.63□□□□□ -2.15
RSM28YDR494W SCL1P21243 252 aaKnown RBP1.63□□□□□ -2.15
RSM28YDR494W YKL075CP36083 450 aa1.63□□□□□ -2.15
RSM28YDR494W HAM1P47119 197 aaKnown RBP1.63□□□□□ -2.15
RSM28YDR494W ILM1P47155 203 aa1.63□□□□□ -2.15
RSM28YDR494W RRN5Q02983 363 aa1.63□□□□□ -2.15
RSM28YDR494W KRE28Q04431 385 aa1.63□□□□□ -2.15
RSM28YDR494W MSA1Q08471 629 aa1.63□□□□□ -2.15
RSM28YDR494W MSW1P04803 379 aa1.62□□□□□ -2.15
RSM28YDR494W FCY2P17064 533 aa1.62□□□□□ -2.15
RSM28YDR494W RPS5P26783 225 aaKnown RBP1.62□□□□□ -2.15
RSM28YDR494W PEP8P40335 379 aa1.62□□□□□ -2.15
RSM28YDR494W FMC1P40491 155 aa1.62□□□□□ -2.15
RSM28YDR494W YIL001WP40560 513 aa1.62□□□□□ -2.15
RSM28YDR494W CAT5P41735 233 aa1.62□□□□□ -2.15
RSM28YDR494W ERG25P53045 309 aa1.62□□□□□ -2.15
RSM28YDR494W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
RSM28YDR494W NIP7Q08962 181 aaKnown RBP1.62□□□□□ -2.15
RSM28YDR494W YOR020W-AQ3E824 90 aa1.62□□□□□ -2.15
RSM28YDR494W MRPL25P23369 157 aa1.61□□□□□ -2.15
RSM28YDR494W PHO88P38264 188 aaPredicted RBP1.61□□□□□ -2.15
RSM28YDR494W RPF1P38805 295 aaKnown RBP1.61□□□□□ -2.15
RSM28YDR494W YJR056CP47115 236 aa1.61□□□□□ -2.15
RSM28YDR494W SSQ1Q05931 657 aaPredicted RBP1.61□□□□□ -2.15
RSM28YDR494W OAC1P32332 324 aa1.6□□□□□ -2.15
RSM28YDR494W LDB7P38210 180 aa1.6□□□□□ -2.15
RSM28YDR494W ERV15P38312 142 aa1.6□□□□□ -2.15
RSM28YDR494W CUE1P38428 203 aa1.6□□□□□ -2.15
RSM28YDR494W CYT2Q00873 224 aa1.6□□□□□ -2.15
RSM28YDR494W PET117Q02771 107 aa1.6□□□□□ -2.15
RSM28YDR494W SRL4Q03085 281 aa1.6□□□□□ -2.15
RSM28YDR494W NEJ1Q06148 342 aa1.6□□□□□ -2.15
RSM28YDR494W HEM25Q07534 307 aa1.6□□□□□ -2.15
RSM28YDR494W YPL229WQ99395 206 aa1.6□□□□□ -2.15
RSM28YDR494W GRX2P17695 143 aaKnown RBP1.59□□□□□ -2.15
RSM28YDR494W YCR016WP25617 290 aaKnown RBP1.59□□□□□ -2.15
RSM28YDR494W SRB4P32569 687 aa1.59□□□□□ -2.15
RSM28YDR494W RIB1P38066 345 aa1.59□□□□□ -2.15
RSM28YDR494W YBR063CP38083 404 aa1.59□□□□□ -2.15
RSM28YDR494W YHR022CP38763 256 aa1.59□□□□□ -2.15
RSM28YDR494W VTC1P40046 129 aaRIP-Chip data1.59□□□□□ -2.15not detected
RSM28YDR494W BMT5P40493 336 aa1.59□□□□□ -2.15
RSM28YDR494W RPA43P46669 326 aa1.59□□□□□ -2.15
RSM28YDR494W YML096WQ04489 525 aa1.59□□□□□ -2.15
RSM28YDR494W ARR2Q06597 130 aa1.59□□□□□ -2.15
RSM28YDR494W ECM33P38248 429 aaKnown RBP1.58□□□□□ -2.16
RSM28YDR494W YHR180WP38868 163 aa1.58□□□□□ -2.16
RSM28YDR494W YKE4P40544 346 aa1.58□□□□□ -2.16
RSM28YDR494W PRM10P42946 383 aa1.58□□□□□ -2.16
RSM28YDR494W USB1Q12208 290 aaKnown RBP1.58□□□□□ -2.16
RSM28YDR494W CDC7P06243 507 aa1.57□□□□□ -2.16
RSM28YDR494W MDH2P22133 377 aa1.57□□□□□ -2.16
RSM28YDR494W MSN4P33749 630 aa1.57□□□□□ -2.16
RSM28YDR494W DSE2P38844 325 aa1.57□□□□□ -2.16
RSM28YDR494W MCM22P47167 239 aa1.57□□□□□ -2.16
RSM28YDR494W TRM9P49957 279 aa1.57□□□□□ -2.16
RSM28YDR494W NUP84P52891 726 aa1.57□□□□□ -2.16
RSM28YDR494W NSA1P53136 463 aaPredicted RBP1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms