RNA–Protein interactions for RNA: YDR034C

LYS14, Transcript of Transcriptional activator involved in regulating lysine biosynthesis, yeast

Gene LYS14, Length 2,373 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS14	YDR034C	YLR173W	Q06247	608 aa		0.93	□□□□□ -2.26
LYS14	YDR034C	YPR172W	Q06608	200 aa		0.93	□□□□□ -2.26
LYS14	YDR034C	AKR2	Q12013	749 aa		0.93	□□□□□ -2.26
LYS14	YDR034C	FIS1	P40515	155 aa		0.92	□□□□□ -2.26
LYS14	YDR034C	YNL134C	P53912	376 aa	Known RBP	0.92	□□□□□ -2.26
LYS14	YDR034C	YNL046W	P53956	172 aa		0.92	□□□□□ -2.26
LYS14	YDR034C	DAD3	P69850	94 aa		0.92	□□□□□ -2.26
LYS14	YDR034C	PAM18	Q07914	168 aa		0.92	□□□□□ -2.26
LYS14	YDR034C	COX5A	P00424	153 aa		0.92	□□□□□ -2.26
LYS14	YDR034C	DSF1	P0CX08	502 aa		0.92	□□□□□ -2.26
LYS14	YDR034C	YNR073C	P0CX09	502 aa		0.92	□□□□□ -2.26
LYS14	YDR034C	YFR054C	P43622	192 aa		0.92	□□□□□ -2.26
LYS14	YDR034C	YJR079W	P47126	109 aa		0.92	□□□□□ -2.26
LYS14	YDR034C	HTL1	Q9URQ5	78 aa		0.92	□□□□□ -2.26
LYS14	YDR034C	TCP1	P12612	559 aa	Known RBP	0.91	□□□□□ -2.26
LYS14	YDR034C	FBA1	P14540	359 aa	Known RBP	0.91	□□□□□ -2.26
LYS14	YDR034C	CTR2	P38865	189 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	BEM2	P39960	2167 aa	Known RBP	0.91	□□□□□ -2.26
LYS14	YDR034C	LSM4	P40070	187 aa	Known RBP	0.91	□□□□□ -2.26
LYS14	YDR034C	YMR144W	P40214	342 aa	Known RBP	0.91	□□□□□ -2.26
LYS14	YDR034C	JHD2	P47156	728 aa	Predicted RBP	0.91	□□□□□ -2.26
LYS14	YDR034C	YGR219W	P53307	113 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	KRE28	Q04431	385 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	SEI1	Q06058	285 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	ATG39	Q06159	398 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	MED4	Q12343	284 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	ATG31	Q12421	196 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	RPL9A	P05738	191 aa	Known RBP	0.91	□□□□□ -2.26
LYS14	YDR034C	PEX4	P29340	183 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	DOG1	P38774	246 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	AYR1	P40471	297 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	CIS3	P47001	227 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	HOC1	P47124	396 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	ILM1	P47155	203 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	RPL9B	P51401	191 aa	Known RBP	0.91	□□□□□ -2.26
LYS14	YDR034C	MRPS8	Q03799	155 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	YLR126C	Q12288	251 aa		0.91	□□□□□ -2.26
LYS14	YDR034C	ERD2	P18414	219 aa		0.9	□□□□□ -2.27
LYS14	YDR034C	SCL1	P21243	252 aa	Known RBP	0.9	□□□□□ -2.27
LYS14	YDR034C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.9	□□□□□ -2.27	not detected
LYS14	YDR034C	YPT52	P36018	234 aa	Known RBP	0.9	□□□□□ -2.27
LYS14	YDR034C	YKL075C	P36083	450 aa		0.9	□□□□□ -2.27
LYS14	YDR034C	MSA1	Q08471	629 aa		0.9	□□□□□ -2.27
LYS14	YDR034C	YOR020W-A	Q3E824	90 aa		0.9	□□□□□ -2.27
LYS14	YDR034C	RAS2	P01120	322 aa	Known RBP	0.9	□□□□□ -2.27
LYS14	YDR034C	RPS5	P26783	225 aa	Known RBP	0.9	□□□□□ -2.27
LYS14	YDR034C	YAR068W	P39564	161 aa		0.9	□□□□□ -2.27
LYS14	YDR034C	PEP8	P40335	379 aa		0.9	□□□□□ -2.27
LYS14	YDR034C	FMC1	P40491	155 aa		0.9	□□□□□ -2.27
LYS14	YDR034C	YIL001W	P40560	513 aa		0.9	□□□□□ -2.27
LYS14	YDR034C	HAM1	P47119	197 aa	Known RBP	0.9	□□□□□ -2.27
LYS14	YDR034C	RRN5	Q02983	363 aa		0.9	□□□□□ -2.27
LYS14	YDR034C	NIP7	Q08962	181 aa	Known RBP	0.9	□□□□□ -2.27
LYS14	YDR034C	MSW1	P04803	379 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	SNA3	P14359	133 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	FCY2	P17064	533 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	PHO88	P38264	188 aa	Predicted RBP	0.89	□□□□□ -2.27
LYS14	YDR034C	CUE1	P38428	203 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	RPF1	P38805	295 aa	Known RBP	0.89	□□□□□ -2.27
LYS14	YDR034C	CAT5	P41735	233 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	ERG25	P53045	309 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	SRL4	Q03085	281 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	SSQ1	Q05931	657 aa	Predicted RBP	0.89	□□□□□ -2.27
LYS14	YDR034C	INO80	P53115	1489 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	FKS1	P38631	1876 aa	Known RBP	0.89	□□□□□ -2.27
LYS14	YDR034C	SIR4	P11978	1358 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	MRPL25	P23369	157 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	OAC1	P32332	324 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	SRB4	P32569	687 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	LDB7	P38210	180 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	ERV15	P38312	142 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	RPA43	P46669	326 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	YJR056C	P47115	236 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	CYT2	Q00873	224 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	YML096W	Q04489	525 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	NEJ1	Q06148	342 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	HEM25	Q07534	307 aa		0.89	□□□□□ -2.27
LYS14	YDR034C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.89	□□□□□ -2.27	not detected
LYS14	YDR034C	YCR016W	P25617	290 aa	Known RBP	0.88	□□□□□ -2.27
LYS14	YDR034C	RIB1	P38066	345 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	YBR063C	P38083	404 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	YHR022C	P38763	256 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	YKE4	P40544	346 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	NUP84	P52891	726 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	PET117	Q02771	107 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	ARR2	Q06597	130 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	CDC7	P06243	507 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	GRX2	P17695	143 aa	Known RBP	0.88	□□□□□ -2.27
LYS14	YDR034C	ECM33	P38248	429 aa	Known RBP	0.88	□□□□□ -2.27
LYS14	YDR034C	VTC1	P40046	129 aa	RIP-Chip data	0.88	□□□□□ -2.27	not detected
LYS14	YDR034C	BMT5	P40493	336 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	PRM10	P42946	383 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	ABF2	Q02486	183 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	YPL229W	Q99395	206 aa		0.88	□□□□□ -2.27
LYS14	YDR034C	MDH2	P22133	377 aa		0.87	□□□□□ -2.27
LYS14	YDR034C	DSE2	P38844	325 aa		0.87	□□□□□ -2.27
LYS14	YDR034C	YHR180W	P38868	163 aa		0.87	□□□□□ -2.27
LYS14	YDR034C	MCM22	P47167	239 aa		0.87	□□□□□ -2.27
LYS14	YDR034C	TRM9	P49957	279 aa		0.87	□□□□□ -2.27
LYS14	YDR034C	TPO4	Q12256	659 aa		0.87	□□□□□ -2.27

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