RNA–Protein interactions for RNA: YOR066W

MSA1, Transcript of Activator of G1-specific transcription factors MBF and SBF, yeast

Gene MSA1, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA1	YOR066W	USE1	P53146	245 aa		3.11	□□□□□ -1.91
MSA1	YOR066W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
MSA1	YOR066W	ASI3	P53983	676 aa		3.11	□□□□□ -1.91
MSA1	YOR066W	MRX8	Q05473	314 aa		3.11	□□□□□ -1.91
MSA1	YOR066W	TCP1	P12612	559 aa	Known RBP	3.11	□□□□□ -1.91
MSA1	YOR066W	FUS3	P16892	353 aa	Known RBP	3.11	□□□□□ -1.91
MSA1	YOR066W	RPB4	P20433	221 aa	Predicted RBP	3.11	□□□□□ -1.91
MSA1	YOR066W	MID2	P36027	376 aa		3.11	□□□□□ -1.91
MSA1	YOR066W	PHO89	P38361	574 aa		3.11	□□□□□ -1.91
MSA1	YOR066W	YCT1	Q12235	531 aa		3.11	□□□□□ -1.91
MSA1	YOR066W	TY1B-NL2	Q99337	1749 aa	Known RBP	3.1	□□□□□ -1.91
MSA1	YOR066W	CPT1	P17898	393 aa		3.1	□□□□□ -1.91
MSA1	YOR066W	DOA4	P32571	926 aa		3.1	□□□□□ -1.91
MSA1	YOR066W	YHL049C	P38722	271 aa		3.1	□□□□□ -1.91
MSA1	YOR066W	THO1	P40040	218 aa	Known RBP	3.1	□□□□□ -1.91
MSA1	YOR066W	JHD2	P47156	728 aa	Predicted RBP	3.1	□□□□□ -1.91
MSA1	YOR066W	UFD1	P53044	361 aa		3.1	□□□□□ -1.91
MSA1	YOR066W	POX1	P13711	748 aa		3.09	□□□□□ -1.91
MSA1	YOR066W	YKT6	P36015	200 aa	Known RBP	3.09	□□□□□ -1.91
MSA1	YOR066W	SYS1	P41544	203 aa		3.09	□□□□□ -1.91
MSA1	YOR066W	YJR079W	P47126	109 aa		3.09	□□□□□ -1.91
MSA1	YOR066W	FLC3	P53121	802 aa		3.09	□□□□□ -1.91
MSA1	YOR066W	SMD1	Q02260	146 aa	Predicted RBP	3.09	□□□□□ -1.91
MSA1	YOR066W	PEX10	Q05568	337 aa		3.09	□□□□□ -1.91
MSA1	YOR066W	YPR098C	Q06089	161 aa		3.09	□□□□□ -1.91
MSA1	YOR066W	SPO77	Q06134	477 aa		3.09	□□□□□ -1.91
MSA1	YOR066W	PLB3	Q08108	686 aa		3.09	□□□□□ -1.91
MSA1	YOR066W	YBT1	P32386	1661 aa		3.09	□□□□□ -1.91
MSA1	YOR066W	IML1	P47170	1584 aa		3.09	□□□□□ -1.92
MSA1	YOR066W	ARG80	P07249	177 aa		3.09	□□□□□ -1.92
MSA1	YOR066W	RPO26	P20435	155 aa		3.09	□□□□□ -1.92
MSA1	YOR066W	PPA2	P28239	310 aa		3.09	□□□□□ -1.92
MSA1	YOR066W	ERG2	P32352	222 aa		3.09	□□□□□ -1.92
MSA1	YOR066W	HMT1	P38074	348 aa		3.09	□□□□□ -1.92
MSA1	YOR066W	SWT21	P53873	357 aa	Predicted RBP	3.09	□□□□□ -1.92
MSA1	YOR066W	CTF19	Q02732	369 aa		3.09	□□□□□ -1.92
MSA1	YOR066W	ECM11	Q04110	302 aa		3.09	□□□□□ -1.92
MSA1	YOR066W	NNT1	Q05874	261 aa		3.09	□□□□□ -1.92
MSA1	YOR066W	RRS1	Q08746	203 aa	Known RBP	3.09	□□□□□ -1.92
MSA1	YOR066W	RFM1	Q12192	310 aa		3.09	□□□□□ -1.92
MSA1	YOR066W	SNU23	Q12368	194 aa	Predicted RBP	3.09	□□□□□ -1.92
MSA1	YOR066W	GEA1	P47102	1408 aa	Predicted RBP	3.08	□□□□□ -1.92
MSA1	YOR066W	RPL24B	P24000	155 aa	Known RBP	3.08	□□□□□ -1.92
MSA1	YOR066W	EHD3	P28817	500 aa		3.08	□□□□□ -1.92
MSA1	YOR066W	FZO1	P38297	855 aa		3.08	□□□□□ -1.92
MSA1	YOR066W	YHI9	P38765	294 aa		3.08	□□□□□ -1.92
MSA1	YOR066W	SLX9	P53251	210 aa	Predicted RBP	3.08	□□□□□ -1.92
MSA1	YOR066W	PGA2	P53903	129 aa		3.08	□□□□□ -1.92
MSA1	YOR066W	ATG17	Q06410	417 aa		3.08	□□□□□ -1.92
MSA1	YOR066W	COQ10	Q08058	207 aa		3.08	□□□□□ -1.92
MSA1	YOR066W	USO1	P25386	1790 aa		3.08	□□□□□ -1.92
MSA1	YOR066W	NUP188	P52593	1655 aa	Known RBP	3.07	□□□□□ -1.92
MSA1	YOR066W	RHO1	P06780	209 aa	Known RBP	3.07	□□□□□ -1.92
MSA1	YOR066W	MRPL25	P23369	157 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	CSG2	P35206	410 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	YBR096W	P38256	230 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	YHL044W	P38727	235 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	TRR2	P38816	342 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	RPE1	P46969	238 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	DXO1	Q06349	442 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	ATG5	Q12380	294 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	VMR1	P38735	1592 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	RPC17	P47076	161 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	AAH1	P53909	347 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	OSH6	Q02201	448 aa		3.07	□□□□□ -1.92
MSA1	YOR066W	SEC7	P11075	2009 aa	Known RBP	3.06	□□□□□ -1.92
MSA1	YOR066W	CUP2	P15315	225 aa		3.06	□□□□□ -1.92
MSA1	YOR066W	VMA6	P32366	345 aa	Known RBP	3.06	□□□□□ -1.92
MSA1	YOR066W	VPS21	P36017	210 aa	Known RBP	3.06	□□□□□ -1.92
MSA1	YOR066W	YBL081W	P38180	368 aa	Known RBP	3.06	□□□□□ -1.92
MSA1	YOR066W	HST4	P53688	370 aa		3.06	□□□□□ -1.92
MSA1	YOR066W	YPL264C	Q08980	353 aa		3.06	□□□□□ -1.92
MSA1	YOR066W	GIS3	Q12418	502 aa		3.06	□□□□□ -1.92
MSA1	YOR066W	THP2	O13539	261 aa	Known RBP	3.05	□□□□□ -1.92
MSA1	YOR066W	NHP6B	P11633	99 aa	Known RBP	3.05	□□□□□ -1.92
MSA1	YOR066W	PRE7	P23724	241 aa	Known RBP	3.05	□□□□□ -1.92
MSA1	YOR066W	PBN1	P25580	416 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	ARN2	P38724	620 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	GOS1	P38736	223 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	SNZ3	P43545	298 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	GTO3	Q04806	366 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	DCR2	Q05924	578 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	YKR104W	P0CE69	306 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	COS2	P0CX12	379 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	COS3	P0CX13	379 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	YCR102C	P25608	368 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	COS4	P43542	379 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	YMR166C	Q03829	368 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	TVP15	Q03860	143 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	YPL150W	Q12152	901 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	ADF1	Q2V2Q1	113 aa		3.05	□□□□□ -1.92
MSA1	YOR066W	SGE1	P33335	543 aa		3.04	□□□□□ -1.92
MSA1	YOR066W	CUE1	P38428	203 aa		3.04	□□□□□ -1.92
MSA1	YOR066W	ZRG17	P53735	605 aa		3.04	□□□□□ -1.92
MSA1	YOR066W	SNZ2	P53824	298 aa		3.04	□□□□□ -1.92
MSA1	YOR066W	SPG4	Q04438	115 aa		3.04	□□□□□ -1.92
MSA1	YOR066W	YPR147C	Q06522	304 aa	Known RBP	3.04	□□□□□ -1.92
MSA1	YOR066W	SRB8	P25648	1427 aa		3.04	□□□□□ -1.92
MSA1	YOR066W	YAK1	P14680	807 aa		3.03	□□□□□ -1.92
MSA1	YOR066W	COQ1	P18900	473 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 951.3 ms