Protein–RNA interactions for Protein: Q04438

SPG4, Stationary phase protein 4, yeastyeast

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPG4Q04438 YML009W-BYML009W-B 477 nt16.35■□□□□ 0.21
SPG4Q04438 NSR1YGR159C 1245 nt16.21■□□□□ 0.19
SPG4Q04438 NOP1YDL014W 984 nt15.99■□□□□ 0.15
SPG4Q04438 YKL036CYKL036C 393 nt14.78□□□□□ -0.04
SPG4Q04438 MDJ1YFL016C 1536 nt14.24□□□□□ -0.13
SPG4Q04438 Q0297Q0297 156 nt13.97□□□□□ -0.17
SPG4Q04438 SRX1YKL086W 384 nt13.93□□□□□ -0.18
SPG4Q04438 YJL027CYJL027C 417 nt13.81□□□□□ -0.2
SPG4Q04438 SCS3YGL126W 1143 nt13.45□□□□□ -0.26
SPG4Q04438 YCR051WYCR051W 669 nt13.22□□□□□ -0.29
SPG4Q04438 YOL085CYOL085C 342 nt12.77□□□□□ -0.37
SPG4Q04438 DBP2YNL112W 1641 nt12.61□□□□□ -0.39
SPG4Q04438 RPP1BYDL130W 321 nt12.54□□□□□ -0.4
SPG4Q04438 PKP1YIL042C 1185 nt12.54□□□□□ -0.4
SPG4Q04438 TRN1tP(UGG)A 72 nt12.52□□□□□ -0.41
SPG4Q04438 SUF9tP(UGG)F 72 nt12.52□□□□□ -0.41
SPG4Q04438 SUF8tP(UGG)H 72 nt12.52□□□□□ -0.41
SPG4Q04438 tP(UGG)LtP(UGG)L 72 nt12.52□□□□□ -0.41
SPG4Q04438 SUF7tP(UGG)M 72 nt12.52□□□□□ -0.41
SPG4Q04438 tP(UGG)N1tP(UGG)N1 72 nt12.52□□□□□ -0.41
SPG4Q04438 tP(UGG)N2tP(UGG)N2 72 nt12.52□□□□□ -0.41
SPG4Q04438 tP(UGG)O1tP(UGG)O1 72 nt12.52□□□□□ -0.41
SPG4Q04438 SUF11tP(UGG)O2 72 nt12.52□□□□□ -0.41
SPG4Q04438 CCC1YLR220W 969 nt12.4□□□□□ -0.42
SPG4Q04438 YBR190WYBR190W 312 nt12.18□□□□□ -0.46
SPG4Q04438 SCJ1YMR214W 1134 nt12.08□□□□□ -0.48
SPG4Q04438 ATS1YAL020C 1002 nt12.06□□□□□ -0.48
SPG4Q04438 RVS167YDR388W 1449 nt12.01□□□□□ -0.49
SPG4Q04438 PET122YER153C 765 nt11.93□□□□□ -0.5
SPG4Q04438 RTC3YHR087W 336 nt11.93□□□□□ -0.5
SPG4Q04438 SCR1SCR1 522 nt11.92□□□□□ -0.5
SPG4Q04438 tP(UGG)O3tP(UGG)O3 72 nt11.88□□□□□ -0.51
SPG4Q04438 RRN5YLR141W 1092 nt11.61□□□□□ -0.55
SPG4Q04438 SHR5YOL110W 714 nt11.56□□□□□ -0.56
SPG4Q04438 YDJ1YNL064C 1230 nt11.51□□□□□ -0.57
SPG4Q04438 RSB1YOR049C 1065 nt11.42□□□□□ -0.58
SPG4Q04438 YER088W-BYER088W-B 147 nt11.38□□□□□ -0.59
SPG4Q04438 GAR1YHR089C 618 nt11.22□□□□□ -0.61
SPG4Q04438 URN1YPR152C 1398 nt11.17□□□□□ -0.62
SPG4Q04438 DEP1YAL013W 1218 nt11.16□□□□□ -0.62
SPG4Q04438 PST2YDR032C 597 nt11.14□□□□□ -0.63
SPG4Q04438 RPN10YHR200W 807 nt11.11□□□□□ -0.63
SPG4Q04438 YNL208WYNL208W 600 nt11.05□□□□□ -0.64
SPG4Q04438 OPI9YLR338W 858 nt11□□□□□ -0.65
SPG4Q04438 PUT4YOR348C 1884 nt10.94□□□□□ -0.66
SPG4Q04438 SAH1YER043C 1350 nt10.88□□□□□ -0.67
SPG4Q04438 TIR1YER011W 765 nt10.85□□□□□ -0.67
SPG4Q04438 YKL097CYKL097C 411 nt10.78□□□□□ -0.68
SPG4Q04438 ARE1YCR048W 1833 nt10.77□□□□□ -0.69
SPG4Q04438 SSA3YBL075C 1950 nt10.75□□□□□ -0.69
SPG4Q04438 PUN1YLR414C 792 nt10.72□□□□□ -0.69
SPG4Q04438 YJR018WYJR018W 363 nt10.67□□□□□ -0.7
SPG4Q04438 SHU1YHL006C 453 nt10.66□□□□□ -0.7
SPG4Q04438 SSA1YAL005C 1929 nt10.66□□□□□ -0.7
SPG4Q04438 YHR049C-AYHR049C-A 297 nt10.65□□□□□ -0.7
SPG4Q04438 POA1YBR022W 534 nt10.62□□□□□ -0.71
SPG4Q04438 RPP2BYDR382W 333 nt10.54□□□□□ -0.72
SPG4Q04438 PTC2YER089C 1395 nt10.52□□□□□ -0.72
SPG4Q04438 YAL037C-BYAL037C-B 975 nt10.45□□□□□ -0.74
SPG4Q04438 BUD23YCR047C 828 nt10.44□□□□□ -0.74
SPG4Q04438 YJR120WYJR120W 351 nt10.43□□□□□ -0.74
SPG4Q04438 NAB2YGL122C 1578 nt10.41□□□□□ -0.74
SPG4Q04438 SRB2YHR041C 633 nt10.41□□□□□ -0.74
SPG4Q04438 YGR021WYGR021W 873 nt10.39□□□□□ -0.75
SPG4Q04438 BSC6YOL137W 1494 nt10.36□□□□□ -0.75
SPG4Q04438 WWM1YFL010C 636 nt10.35□□□□□ -0.75
SPG4Q04438 INM2YDR287W 879 nt10.32□□□□□ -0.76
SPG4Q04438 BDH2YAL061W 1254 nt10.3□□□□□ -0.76
SPG4Q04438 HOM6YJR139C 1080 nt10.29□□□□□ -0.76
SPG4Q04438 DAL1YIR027C 1383 nt10.28□□□□□ -0.76
SPG4Q04438 YOR139CYOR139C 393 nt10.26□□□□□ -0.77
SPG4Q04438 NPL3YDR432W 1245 nt10.25□□□□□ -0.77
SPG4Q04438 FPR4YLR449W 1179 nt10.25□□□□□ -0.77
SPG4Q04438 YFL021C-AYFL021C-A 855 nt10.24□□□□□ -0.77
SPG4Q04438 MNP1YGL068W 585 nt10.22□□□□□ -0.77
SPG4Q04438 FIS1YIL065C 468 nt10.21□□□□□ -0.77
SPG4Q04438 LSM3YLR438C-A 270 nt10.2□□□□□ -0.78
SPG4Q04438 YBL100CYBL100C 315 nt10.2□□□□□ -0.78
SPG4Q04438 YOL037CYOL037C 354 nt10.17□□□□□ -0.78
SPG4Q04438 PHO4YFR034C 939 nt10.16□□□□□ -0.78
SPG4Q04438 RKM5YLR137W 1104 nt10.16□□□□□ -0.78
SPG4Q04438 Q0182Q0182 405 nt10.11□□□□□ -0.79
SPG4Q04438 TRM9YML014W 840 nt10.11□□□□□ -0.79
SPG4Q04438 FUN26YAL022C 1554 nt10.07□□□□□ -0.8
SPG4Q04438 CCT6YDR188W 1641 nt9.97□□□□□ -0.81
SPG4Q04438 ALF1YNL148C 765 nt9.96□□□□□ -0.82
SPG4Q04438 SUF2tP(AGG)C 72 nt9.95□□□□□ -0.82
SPG4Q04438 SUF10tP(AGG)N 72 nt9.95□□□□□ -0.82
SPG4Q04438 YPS1YLR120C 1710 nt9.93□□□□□ -0.82
SPG4Q04438 YLR281CYLR281C 468 nt9.89□□□□□ -0.83
SPG4Q04438 YDR095CYDR095C 411 nt9.88□□□□□ -0.83
SPG4Q04438 tM(CAU)CtM(CAU)C 72 nt9.88□□□□□ -0.83
SPG4Q04438 IMT4tM(CAU)E 72 nt9.88□□□□□ -0.83
SPG4Q04438 IMT3tM(CAU)J3 72 nt9.88□□□□□ -0.83
SPG4Q04438 IMT1tM(CAU)O1 72 nt9.88□□□□□ -0.83
SPG4Q04438 IMT2tM(CAU)P 72 nt9.88□□□□□ -0.83
SPG4Q04438 WHI5YOR083W 888 nt9.85□□□□□ -0.83
SPG4Q04438 YHR165W-AYHR165W-A 312 nt9.84□□□□□ -0.83
SPG4Q04438 PUS2YGL063W 1113 nt9.83□□□□□ -0.84
SPG4Q04438 YLR154C-GYLR154C-G 150 nt9.78□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms