RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C RPP0P05317 312 aaKnown RBP5.83□□□□□ -1.48
SHO1YER118C BMH1P29311 267 aaKnown RBP5.83□□□□□ -1.48
SHO1YER118C TIR2P33890 251 aa5.83□□□□□ -1.48
SHO1YER118C PHD1P36093 366 aa5.83□□□□□ -1.48
SHO1YER118C RIB5P38145 238 aa5.83□□□□□ -1.48
SHO1YER118C RFT1P38206 574 aaPredicted RBP5.83□□□□□ -1.48
SHO1YER118C ECM8P38246 354 aa5.83□□□□□ -1.48
SHO1YER118C LEU5P38702 357 aa5.83□□□□□ -1.48
SHO1YER118C SMB1P40018 196 aaKnown RBP5.83□□□□□ -1.48
SHO1YER118C PRE6P40303 254 aaKnown RBP5.83□□□□□ -1.48
SHO1YER118C CSM2P40465 213 aa5.83□□□□□ -1.48
SHO1YER118C YKE4P40544 346 aa5.83□□□□□ -1.48
SHO1YER118C YJR030CP47101 745 aa5.83□□□□□ -1.48
SHO1YER118C ADO1P47143 340 aaKnown RBP5.83□□□□□ -1.48
SHO1YER118C YJR141WP47172 347 aaPredicted RBP5.83□□□□□ -1.48
SHO1YER118C YJR149WP47177 404 aa5.83□□□□□ -1.48
SHO1YER118C PEX12Q04370 399 aa5.83□□□□□ -1.48
SHO1YER118C CTR3Q06686 241 aa5.83□□□□□ -1.48
SHO1YER118C JLP1Q12358 412 aa5.83□□□□□ -1.48
SHO1YER118C SNA3P14359 133 aa5.82□□□□□ -1.48
SHO1YER118C MTF1P14908 341 aaKnown RBP5.82□□□□□ -1.48
SHO1YER118C TIP1P27654 210 aaPredicted RBP5.82□□□□□ -1.48
SHO1YER118C CUE1P38428 203 aa5.82□□□□□ -1.48
SHO1YER118C VRG4P40107 337 aa5.82□□□□□ -1.48
SHO1YER118C ALG8P40351 577 aa5.82□□□□□ -1.48
SHO1YER118C YJR012CP47087 207 aa5.82□□□□□ -1.48
SHO1YER118C ECL1P48235 211 aa5.82□□□□□ -1.48
SHO1YER118C SWC4P53201 476 aa5.82□□□□□ -1.48
SHO1YER118C YNL140CP53910 189 aa5.82□□□□□ -1.48
SHO1YER118C SNX41Q04053 625 aa5.82□□□□□ -1.48
SHO1YER118C MHR1Q06630 226 aa5.82□□□□□ -1.48
SHO1YER118C YET3Q07451 203 aa5.82□□□□□ -1.48
SHO1YER118C YLR012CQ07927 99 aa5.82□□□□□ -1.48
SHO1YER118C YAP7Q08182 245 aa5.82□□□□□ -1.48
SHO1YER118C DCN1Q12395 269 aa5.82□□□□□ -1.48
SHO1YER118C ARP6Q12509 438 aa5.82□□□□□ -1.48
SHO1YER118C CAP2P13517 287 aa5.81□□□□□ -1.48
SHO1YER118C SLY1P22213 666 aa5.81□□□□□ -1.48
SHO1YER118C EXG1P23776 448 aaKnown RBP5.81□□□□□ -1.48
SHO1YER118C RPL16BP26785 198 aaKnown RBP5.81□□□□□ -1.48
SHO1YER118C COQ3P27680 312 aa5.81□□□□□ -1.48
SHO1YER118C KAR9P32526 644 aa5.81□□□□□ -1.48
SHO1YER118C DHH1P39517 506 aaKnown RBP5.81□□□□□ -1.48
SHO1YER118C VAB2P40003 282 aa5.81□□□□□ -1.48
SHO1YER118C BMT5P40493 336 aa5.81□□□□□ -1.48
SHO1YER118C PMT4P46971 762 aa5.81□□□□□ -1.48
SHO1YER118C USE1P53146 245 aa5.81□□□□□ -1.48
SHO1YER118C MTM1P53320 366 aa5.81□□□□□ -1.48
SHO1YER118C YNL095CP53932 642 aa5.81□□□□□ -1.48
SHO1YER118C ODC1Q03028 310 aa5.81□□□□□ -1.48
SHO1YER118C YMR114CQ04471 368 aaKnown RBP5.81□□□□□ -1.48
SHO1YER118C THI20Q08224 551 aa5.81□□□□□ -1.48
SHO1YER118C PFA4Q12006 378 aa5.81□□□□□ -1.48
SHO1YER118C TUS1Q06412 1307 aa5.8□□□□□ -1.48
SHO1YER118C HOM6P31116 359 aaKnown RBP5.8□□□□□ -1.48
SHO1YER118C YMC1P32331 307 aa5.8□□□□□ -1.48
SHO1YER118C QRI5P32344 111 aa5.8□□□□□ -1.48
SHO1YER118C DBP7P36120 742 aaKnown RBP5.8□□□□□ -1.48
SHO1YER118C YBR241CP38142 488 aa5.8□□□□□ -1.48
SHO1YER118C YAT2P40017 923 aa5.8□□□□□ -1.48
SHO1YER118C QRI1P43123 477 aaKnown RBP5.8□□□□□ -1.48
SHO1YER118C CDH1P53197 566 aa5.8□□□□□ -1.48
SHO1YER118C MAL13P53338 473 aa5.8□□□□□ -1.48
SHO1YER118C ARC18Q05933 178 aaKnown RBP5.8□□□□□ -1.48
SHO1YER118C TIM18Q08749 192 aa5.8□□□□□ -1.48
SHO1YER118C YDL009CQ12210 107 aa5.8□□□□□ -1.48
SHO1YER118C YCT1Q12235 531 aa5.8□□□□□ -1.48
SHO1YER118C SME1Q12330 94 aaPredicted RBP5.8□□□□□ -1.48
SHO1YER118C RPL28P02406 149 aaKnown RBP5.79□□□□□ -1.48
SHO1YER118C TFS1P14306 219 aa5.79□□□□□ -1.48
SHO1YER118C AMD1P15274 810 aaKnown RBP5.79□□□□□ -1.48
SHO1YER118C CDC10P25342 322 aaKnown RBP5.79□□□□□ -1.48
SHO1YER118C EHD3P28817 500 aa5.79□□□□□ -1.48
SHO1YER118C YOX1P34161 385 aa5.79□□□□□ -1.48
SHO1YER118C TES1P41903 349 aaKnown RBP5.79□□□□□ -1.48
SHO1YER118C WWM1P43582 211 aaKnown RBP5.79□□□□□ -1.48
SHO1YER118C SFH5P47008 294 aa5.79□□□□□ -1.48
SHO1YER118C PRP24P49960 444 aaKnown RBP5.79□□□□□ -1.48
SHO1YER118C UBC13P52490 153 aa5.79□□□□□ -1.48
SHO1YER118C MRM2P53123 320 aa5.79□□□□□ -1.48
SHO1YER118C COS1P53822 381 aa5.79□□□□□ -1.48
SHO1YER118C HCH1P53834 153 aa5.79□□□□□ -1.48
SHO1YER118C IRC15Q02733 499 aa5.79□□□□□ -1.48
SHO1YER118C CCE1Q03702 353 aa5.79□□□□□ -1.48
SHO1YER118C MRPL51Q06090 140 aaPredicted RBP5.79□□□□□ -1.48
SHO1YER118C SFH1Q06168 426 aa5.79□□□□□ -1.48
SHO1YER118C BSP1Q06604 576 aa5.79□□□□□ -1.48
SHO1YER118C UTP23Q12339 254 aaKnown RBP5.79□□□□□ -1.48
SHO1YER118C SAL1D6W196 494 aa5.78□□□□□ -1.48
SHO1YER118C URA6P15700 204 aa5.78□□□□□ -1.48
SHO1YER118C CPR3P25719 182 aa5.78□□□□□ -1.48
SHO1YER118C DEP1P31385 405 aa5.78□□□□□ -1.48
SHO1YER118C VPH2P32341 215 aa5.78□□□□□ -1.48
SHO1YER118C MCH2P36032 473 aa5.78□□□□□ -1.48
SHO1YER118C SPC34P36131 295 aa5.78□□□□□ -1.48
SHO1YER118C YPC1P38298 316 aa5.78□□□□□ -1.48
SHO1YER118C SDS24P38314 527 aa5.78□□□□□ -1.48
SHO1YER118C YIL169CP40442 995 aa5.78□□□□□ -1.48
SHO1YER118C ASI3P53983 676 aa5.78□□□□□ -1.48
SHO1YER118C ECM11Q04110 302 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 93.8 ms