Protein–RNA interactions for Protein: P38298

YPC1, Alkaline ceramidase YPC1, yeastyeast

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPC1P38298 NSR1YGR159C 1245 nt17.04■□□□□ 0.32
YPC1P38298 YML009W-BYML009W-B 477 nt16.74■□□□□ 0.27
YPC1P38298 NOP1YDL014W 984 nt16.06■□□□□ 0.16
YPC1P38298 MDJ1YFL016C 1536 nt15.65■□□□□ 0.1
YPC1P38298 YJL027CYJL027C 417 nt14.43□□□□□ -0.1
YPC1P38298 YKL036CYKL036C 393 nt14.3□□□□□ -0.12
YPC1P38298 SRX1YKL086W 384 nt13.98□□□□□ -0.17
YPC1P38298 Q0297Q0297 156 nt13.81□□□□□ -0.2
YPC1P38298 DBP2YNL112W 1641 nt13.55□□□□□ -0.24
YPC1P38298 YBR190WYBR190W 312 nt13.47□□□□□ -0.25
YPC1P38298 YCR051WYCR051W 669 nt13.3□□□□□ -0.28
YPC1P38298 RTC3YHR087W 336 nt13.24□□□□□ -0.29
YPC1P38298 SSA3YBL075C 1950 nt13.01□□□□□ -0.33
YPC1P38298 TRN1tP(UGG)A 72 nt12.93□□□□□ -0.34
YPC1P38298 SUF9tP(UGG)F 72 nt12.93□□□□□ -0.34
YPC1P38298 SUF8tP(UGG)H 72 nt12.93□□□□□ -0.34
YPC1P38298 tP(UGG)LtP(UGG)L 72 nt12.93□□□□□ -0.34
YPC1P38298 SUF7tP(UGG)M 72 nt12.93□□□□□ -0.34
YPC1P38298 tP(UGG)N1tP(UGG)N1 72 nt12.93□□□□□ -0.34
YPC1P38298 tP(UGG)N2tP(UGG)N2 72 nt12.93□□□□□ -0.34
YPC1P38298 tP(UGG)O1tP(UGG)O1 72 nt12.93□□□□□ -0.34
YPC1P38298 SUF11tP(UGG)O2 72 nt12.93□□□□□ -0.34
YPC1P38298 CCC1YLR220W 969 nt12.91□□□□□ -0.34
YPC1P38298 RVS167YDR388W 1449 nt12.74□□□□□ -0.37
YPC1P38298 SCS3YGL126W 1143 nt12.7□□□□□ -0.38
YPC1P38298 PUT4YOR348C 1884 nt12.59□□□□□ -0.39
YPC1P38298 SCJ1YMR214W 1134 nt12.48□□□□□ -0.41
YPC1P38298 RPP1BYDL130W 321 nt12.42□□□□□ -0.42
YPC1P38298 YOL085CYOL085C 342 nt12.38□□□□□ -0.43
YPC1P38298 PKP1YIL042C 1185 nt12.31□□□□□ -0.44
YPC1P38298 POA1YBR022W 534 nt12.23□□□□□ -0.45
YPC1P38298 ARE1YCR048W 1833 nt12.2□□□□□ -0.46
YPC1P38298 URN1YPR152C 1398 nt12.14□□□□□ -0.47
YPC1P38298 SHR5YOL110W 714 nt12.13□□□□□ -0.47
YPC1P38298 SAH1YER043C 1350 nt12.12□□□□□ -0.47
YPC1P38298 YHR049C-AYHR049C-A 297 nt12.11□□□□□ -0.47
YPC1P38298 tP(UGG)O3tP(UGG)O3 72 nt12.09□□□□□ -0.47
YPC1P38298 BSC6YOL137W 1494 nt12.04□□□□□ -0.48
YPC1P38298 OPI9YLR338W 858 nt12.03□□□□□ -0.48
YPC1P38298 DEP1YAL013W 1218 nt12.02□□□□□ -0.49
YPC1P38298 PET122YER153C 765 nt11.93□□□□□ -0.5
YPC1P38298 RPN10YHR200W 807 nt11.86□□□□□ -0.51
YPC1P38298 BUD23YCR047C 828 nt11.85□□□□□ -0.51
YPC1P38298 YNL208WYNL208W 600 nt11.74□□□□□ -0.53
YPC1P38298 PUN1YLR414C 792 nt11.71□□□□□ -0.53
YPC1P38298 SCR1SCR1 522 nt11.71□□□□□ -0.53
YPC1P38298 SPT5YML010W 3192 nt11.69□□□□□ -0.54
YPC1P38298 YDJ1YNL064C 1230 nt11.68□□□□□ -0.54
YPC1P38298 PTC2YER089C 1395 nt11.67□□□□□ -0.54
YPC1P38298 SSA4YER103W 1929 nt11.65□□□□□ -0.54
YPC1P38298 GAR1YHR089C 618 nt11.57□□□□□ -0.56
YPC1P38298 NAB2YGL122C 1578 nt11.57□□□□□ -0.56
YPC1P38298 YJR018WYJR018W 363 nt11.55□□□□□ -0.56
YPC1P38298 RRN5YLR141W 1092 nt11.55□□□□□ -0.56
YPC1P38298 FPR4YLR449W 1179 nt11.38□□□□□ -0.59
YPC1P38298 MEP2YNL142W 1500 nt11.34□□□□□ -0.59
YPC1P38298 DAL1YIR027C 1383 nt11.31□□□□□ -0.6
YPC1P38298 FIS1YIL065C 468 nt11.3□□□□□ -0.6
YPC1P38298 YER088W-BYER088W-B 147 nt11.29□□□□□ -0.6
YPC1P38298 RPP2BYDR382W 333 nt11.22□□□□□ -0.61
YPC1P38298 ATS1YAL020C 1002 nt11.22□□□□□ -0.61
YPC1P38298 INM2YDR287W 879 nt11.2□□□□□ -0.62
YPC1P38298 PHO4YFR034C 939 nt11.2□□□□□ -0.62
YPC1P38298 RSB1YOR049C 1065 nt11.2□□□□□ -0.62
YPC1P38298 BDF1YLR399C 2061 nt11.18□□□□□ -0.62
YPC1P38298 TIR1YER011W 765 nt11.18□□□□□ -0.62
YPC1P38298 DCW1YKL046C 1350 nt11.16□□□□□ -0.62
YPC1P38298 YJR120WYJR120W 351 nt11.15□□□□□ -0.62
YPC1P38298 YPS1YLR120C 1710 nt11.15□□□□□ -0.63
YPC1P38298 YHR165W-AYHR165W-A 312 nt11.14□□□□□ -0.63
YPC1P38298 SSA1YAL005C 1929 nt11.11□□□□□ -0.63
YPC1P38298 YMR090WYMR090W 684 nt11.03□□□□□ -0.64
YPC1P38298 TAT1YBR069C 1860 nt11.03□□□□□ -0.64
YPC1P38298 YBL100CYBL100C 315 nt11.02□□□□□ -0.65
YPC1P38298 EMI2YDR516C 1503 nt11.01□□□□□ -0.65
YPC1P38298 YDR095CYDR095C 411 nt10.98□□□□□ -0.65
YPC1P38298 YBR220CYBR220C 1683 nt10.93□□□□□ -0.66
YPC1P38298 PAC11YDR488C 1602 nt10.91□□□□□ -0.66
YPC1P38298 ALF1YNL148C 765 nt10.88□□□□□ -0.67
YPC1P38298 YDL221WYDL221W 552 nt10.86□□□□□ -0.67
YPC1P38298 FUN26YAL022C 1554 nt10.86□□□□□ -0.67
YPC1P38298 BDH2YAL061W 1254 nt10.84□□□□□ -0.67
YPC1P38298 RPP2AYOL039W 321 nt10.82□□□□□ -0.68
YPC1P38298 NVJ2YPR091C 2313 nt10.82□□□□□ -0.68
YPC1P38298 SDH1YKL148C 1923 nt10.82□□□□□ -0.68
YPC1P38298 CAC2YML102W 1407 nt10.81□□□□□ -0.68
YPC1P38298 SRB2YHR041C 633 nt10.78□□□□□ -0.68
YPC1P38298 TRM9YML014W 840 nt10.78□□□□□ -0.68
YPC1P38298 PTP1YDL230W 1008 nt10.76□□□□□ -0.69
YPC1P38298 SCC4YER147C 1875 nt10.7□□□□□ -0.7
YPC1P38298 PCH2YBR186W 1695 nt10.66□□□□□ -0.7
YPC1P38298 SEC11YIR022W 504 nt10.65□□□□□ -0.7
YPC1P38298 SUF2tP(AGG)C 72 nt10.63□□□□□ -0.71
YPC1P38298 SUF10tP(AGG)N 72 nt10.63□□□□□ -0.71
YPC1P38298 IRC15YPL017C 1500 nt10.63□□□□□ -0.71
YPC1P38298 SIS1YNL007C 1059 nt10.62□□□□□ -0.71
YPC1P38298 CCT6YDR188W 1641 nt10.62□□□□□ -0.71
YPC1P38298 FPS1YLL043W 2010 nt10.61□□□□□ -0.71
YPC1P38298 LSM3YLR438C-A 270 nt10.6□□□□□ -0.71
YPC1P38298 GUT2YIL155C 1950 nt10.59□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 7.9 ms