RNA–Protein interactions for RNA: YPL054W

LEE1, Transcript of Zinc-finger protein of unknown function, yeast

Gene LEE1, Length 906 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LEE1	YPL054W	YER084W	P40057	128 aa		1.2	□□□□□ -2.22
LEE1	YPL054W	LYS12	P40495	371 aa	Known RBP	1.2	□□□□□ -2.22
LEE1	YPL054W	FMP48	P53233	369 aa		1.2	□□□□□ -2.22
LEE1	YPL054W	YOL075C	Q08234	1294 aa		1.2	□□□□□ -2.22
LEE1	YPL054W	SRN2	Q99176	213 aa		1.19	□□□□□ -2.22
LEE1	YPL054W	RPN12	P32496	274 aa		1.18	□□□□□ -2.22
LEE1	YPL054W	CSE1	P33307	960 aa		1.18	□□□□□ -2.22
LEE1	YPL054W	ASP1	P38986	381 aa	Predicted RBP	1.18	□□□□□ -2.22
LEE1	YPL054W	SLM1	P40485	686 aa		1.18	□□□□□ -2.22
LEE1	YPL054W	SYF2	P53277	215 aa	Predicted RBP	1.18	□□□□□ -2.22
LEE1	YPL054W	RPC53	P25441	422 aa		1.17	□□□□□ -2.22
LEE1	YPL054W	SRP72	P38688	640 aa	Known RBP	1.17	□□□□□ -2.22
LEE1	YPL054W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	1.17	□□□□□ -2.22	not detected
LEE1	YPL054W	TAF10	Q12030	206 aa		1.17	□□□□□ -2.22
LEE1	YPL054W	ISA2	Q12425	185 aa		1.17	□□□□□ -2.22
LEE1	YPL054W	YER188W	P40103	239 aa		1.16	□□□□□ -2.22
LEE1	YPL054W	LST7	P53237	242 aa		1.16	□□□□□ -2.22
LEE1	YPL054W	RET3	P53600	189 aa		1.16	□□□□□ -2.22
LEE1	YPL054W	FAR1	P21268	830 aa		1.15	□□□□□ -2.23
LEE1	YPL054W	MRPL20	P22354	195 aa	Predicted RBP	1.15	□□□□□ -2.23
LEE1	YPL054W	YEL043W	P32618	956 aa		1.15	□□□□□ -2.23
LEE1	YPL054W	YKL187C	P34231	750 aa		1.15	□□□□□ -2.23
LEE1	YPL054W	LCB2	P40970	561 aa		1.15	□□□□□ -2.23
LEE1	YPL054W	YNL040W	P53960	456 aa	Predicted RBP	1.15	□□□□□ -2.23
LEE1	YPL054W	TFC7	Q12415	435 aa		1.15	□□□□□ -2.23
LEE1	YPL054W	MHP1	P43638	1398 aa		1.14	□□□□□ -2.23
LEE1	YPL054W	MSK1	P32048	576 aa		1.14	□□□□□ -2.23
LEE1	YPL054W	CLB6	P32943	380 aa		1.14	□□□□□ -2.23
LEE1	YPL054W	JNM1	P36224	373 aa		1.14	□□□□□ -2.23
LEE1	YPL054W	YBL028C	P38202	106 aa		1.14	□□□□□ -2.23
LEE1	YPL054W	GPM3	Q12326	303 aa		1.14	□□□□□ -2.23
LEE1	YPL054W	TRM10	Q12400	293 aa		1.14	□□□□□ -2.23
LEE1	YPL054W	DAP2	P18962	818 aa		1.13	□□□□□ -2.23
LEE1	YPL054W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	1.13	□□□□□ -2.23	not detected
LEE1	YPL054W	LSG1	P53145	640 aa	Known RBP	1.13	□□□□□ -2.23
LEE1	YPL054W	CGI121	Q03705	181 aa	Known RBP	1.13	□□□□□ -2.23
LEE1	YPL054W	PHO80	P20052	293 aa		1.12	□□□□□ -2.23
LEE1	YPL054W	CAB3	P36076	571 aa		1.12	□□□□□ -2.23
LEE1	YPL054W	DSE1	P40077	573 aa		1.12	□□□□□ -2.23
LEE1	YPL054W	LCP5	P40079	357 aa	Predicted RBP	1.12	□□□□□ -2.23
LEE1	YPL054W	SDS23	P53172	527 aa		1.12	□□□□□ -2.23
LEE1	YPL054W	AQR1	P53943	586 aa		1.12	□□□□□ -2.23
LEE1	YPL054W	ERP3	Q12403	225 aa		1.12	□□□□□ -2.23
LEE1	YPL054W	YOL163W	P0CF20	169 aa		1.11	□□□□□ -2.23
LEE1	YPL054W	DBR1	P24309	405 aa	Known RBP	1.11	□□□□□ -2.23
LEE1	YPL054W	EPL1	P43572	832 aa		1.11	□□□□□ -2.23
LEE1	YPL054W	ACT1	P60010	375 aa	Known RBP	1.11	□□□□□ -2.23
LEE1	YPL054W	SPC19	Q03954	165 aa		1.11	□□□□□ -2.23
LEE1	YPL054W	SPH1	Q06160	661 aa		1.11	□□□□□ -2.23
LEE1	YPL054W	TY3A-G	Q12173	290 aa		1.11	□□□□□ -2.23
LEE1	YPL054W	RPN6	Q12377	434 aa		1.11	□□□□□ -2.23
LEE1	YPL054W	TY3A-I	Q99219	290 aa		1.11	□□□□□ -2.23
LEE1	YPL054W	ARF2	P19146	181 aa	Known RBP	1.1	□□□□□ -2.23
LEE1	YPL054W	NRG2	P38082	220 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	MLH1	P38920	769 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	POP2	P39008	433 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	EDC2	P40023	145 aa	Predicted RBP	1.1	□□□□□ -2.23
LEE1	YPL054W	SNL1	P40548	159 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	PMT4	P46971	762 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	DSK2	P48510	373 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	TPC1	P53257	314 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	UBX2	Q04228	584 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	YPR078C	Q06813	372 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	PEX27	Q08580	376 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	RPN5	Q12250	445 aa	Known RBP	1.1	□□□□□ -2.23
LEE1	YPL054W	TIM22	Q12328	207 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	FSH3	Q99369	266 aa		1.1	□□□□□ -2.23
LEE1	YPL054W	YAK1	P14680	807 aa		1.09	□□□□□ -2.23
LEE1	YPL054W	ATG7	P38862	630 aa		1.09	□□□□□ -2.23
LEE1	YPL054W	AIM33	Q04516	312 aa		1.09	□□□□□ -2.23
LEE1	YPL054W	CSM3	Q04659	317 aa		1.09	□□□□□ -2.23
LEE1	YPL054W	RPL1A	P0CX43	217 aa	Known RBP	1.08	□□□□□ -2.24
LEE1	YPL054W	RPL1B	P0CX44	217 aa	Known RBP	1.08	□□□□□ -2.24
LEE1	YPL054W	KTI12	P34253	313 aa	Known RBP	1.08	□□□□□ -2.24
LEE1	YPL054W	MYO5	Q04439	1219 aa	Known RBP	1.08	□□□□□ -2.24
LEE1	YPL054W	BUD21	Q08492	214 aa	Predicted RBP	1.08	□□□□□ -2.24
LEE1	YPL054W	SPE3	Q12074	293 aa	Known RBP	1.08	□□□□□ -2.24
LEE1	YPL054W	CBP2	P03874	630 aa	Predicted RBP	1.07	□□□□□ -2.24
LEE1	YPL054W	VPS1	P21576	704 aa	Known RBP	1.07	□□□□□ -2.24
LEE1	YPL054W	PRE7	P23724	241 aa	Known RBP	1.07	□□□□□ -2.24
LEE1	YPL054W	PSO2	P30620	661 aa		1.07	□□□□□ -2.24
LEE1	YPL054W	YFR054C	P43622	192 aa		1.07	□□□□□ -2.24
LEE1	YPL054W	UFD1	P53044	361 aa		1.07	□□□□□ -2.24
LEE1	YPL054W	MPS2	P53159	387 aa		1.07	□□□□□ -2.24
LEE1	YPL054W	RPS16A	P0CX51	143 aa	Known RBP	1.06	□□□□□ -2.24
LEE1	YPL054W	RPS16B	P0CX52	143 aa	Known RBP	1.06	□□□□□ -2.24
LEE1	YPL054W	CDC42	P19073	191 aa		1.06	□□□□□ -2.24
LEE1	YPL054W	RRT12	P25381	491 aa		1.06	□□□□□ -2.24
LEE1	YPL054W	MRPS5	P33759	307 aa		1.06	□□□□□ -2.24
LEE1	YPL054W	SMP3	Q04174	516 aa		1.06	□□□□□ -2.24
LEE1	YPL054W	VPS68	Q12016	184 aa		1.06	□□□□□ -2.24
LEE1	YPL054W	ERG9	P29704	444 aa		1.05	□□□□□ -2.24
LEE1	YPL054W	MPE1	P35728	441 aa	Known RBP	1.05	□□□□□ -2.24
LEE1	YPL054W	DAN1	P47178	298 aa		1.05	□□□□□ -2.24
LEE1	YPL054W	SSU72	P53538	206 aa	Predicted RBP	1.05	□□□□□ -2.24
LEE1	YPL054W	CIK1	Q01649	594 aa		1.05	□□□□□ -2.24
LEE1	YPL054W	RDS3	Q06835	107 aa	Predicted RBP	1.05	□□□□□ -2.24
LEE1	YPL054W	APC5	Q08683	685 aa		1.05	□□□□□ -2.24
LEE1	YPL054W	YOR012W	Q12351	137 aa		1.05	□□□□□ -2.24
LEE1	YPL054W	PFK27	Q12471	397 aa	Predicted RBP	1.05	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms