Protein–RNA interactions for Protein: Q08580

PEX27, Peroxisomal membrane protein PEX27, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX27Q08580 NSR1YGR159C 1245 nt17.98■□□□□ 0.47
PEX27Q08580 YML009W-BYML009W-B 477 nt17.54■□□□□ 0.4
PEX27Q08580 NOP1YDL014W 984 nt16.79■□□□□ 0.28
PEX27Q08580 MDJ1YFL016C 1536 nt16.52■□□□□ 0.24
PEX27Q08580 YJL027CYJL027C 417 nt15.15■□□□□ 0.02
PEX27Q08580 YKL036CYKL036C 393 nt14.97□□□□□ -0.01
PEX27Q08580 SRX1YKL086W 384 nt14.71□□□□□ -0.05
PEX27Q08580 Q0297Q0297 156 nt14.57□□□□□ -0.08
PEX27Q08580 DBP2YNL112W 1641 nt14.44□□□□□ -0.1
PEX27Q08580 YBR190WYBR190W 312 nt14.24□□□□□ -0.13
PEX27Q08580 SSA3YBL075C 1950 nt14.02□□□□□ -0.17
PEX27Q08580 YCR051WYCR051W 669 nt13.86□□□□□ -0.19
PEX27Q08580 RTC3YHR087W 336 nt13.83□□□□□ -0.2
PEX27Q08580 TRN1tP(UGG)A 72 nt13.68□□□□□ -0.22
PEX27Q08580 SUF9tP(UGG)F 72 nt13.68□□□□□ -0.22
PEX27Q08580 SUF8tP(UGG)H 72 nt13.68□□□□□ -0.22
PEX27Q08580 tP(UGG)LtP(UGG)L 72 nt13.68□□□□□ -0.22
PEX27Q08580 SUF7tP(UGG)M 72 nt13.68□□□□□ -0.22
PEX27Q08580 tP(UGG)N1tP(UGG)N1 72 nt13.68□□□□□ -0.22
PEX27Q08580 tP(UGG)N2tP(UGG)N2 72 nt13.68□□□□□ -0.22
PEX27Q08580 tP(UGG)O1tP(UGG)O1 72 nt13.68□□□□□ -0.22
PEX27Q08580 SUF11tP(UGG)O2 72 nt13.68□□□□□ -0.22
PEX27Q08580 CCC1YLR220W 969 nt13.46□□□□□ -0.25
PEX27Q08580 PUT4YOR348C 1884 nt13.43□□□□□ -0.26
PEX27Q08580 SCS3YGL126W 1143 nt13.34□□□□□ -0.27
PEX27Q08580 RVS167YDR388W 1449 nt13.32□□□□□ -0.28
PEX27Q08580 SCJ1YMR214W 1134 nt13.23□□□□□ -0.29
PEX27Q08580 RPP1BYDL130W 321 nt13.05□□□□□ -0.32
PEX27Q08580 YOL085CYOL085C 342 nt13.01□□□□□ -0.33
PEX27Q08580 ARE1YCR048W 1833 nt13□□□□□ -0.33
PEX27Q08580 POA1YBR022W 534 nt12.91□□□□□ -0.34
PEX27Q08580 PKP1YIL042C 1185 nt12.86□□□□□ -0.35
PEX27Q08580 SAH1YER043C 1350 nt12.8□□□□□ -0.36
PEX27Q08580 YHR049C-AYHR049C-A 297 nt12.79□□□□□ -0.36
PEX27Q08580 SHR5YOL110W 714 nt12.77□□□□□ -0.37
PEX27Q08580 URN1YPR152C 1398 nt12.77□□□□□ -0.37
PEX27Q08580 BSC6YOL137W 1494 nt12.77□□□□□ -0.37
PEX27Q08580 SPT5YML010W 3192 nt12.74□□□□□ -0.37
PEX27Q08580 OPI9YLR338W 858 nt12.73□□□□□ -0.37
PEX27Q08580 tP(UGG)O3tP(UGG)O3 72 nt12.72□□□□□ -0.37
PEX27Q08580 DEP1YAL013W 1218 nt12.58□□□□□ -0.4
PEX27Q08580 PET122YER153C 765 nt12.55□□□□□ -0.4
PEX27Q08580 SSA4YER103W 1929 nt12.49□□□□□ -0.41
PEX27Q08580 BUD23YCR047C 828 nt12.4□□□□□ -0.42
PEX27Q08580 RPN10YHR200W 807 nt12.4□□□□□ -0.42
PEX27Q08580 PUN1YLR414C 792 nt12.33□□□□□ -0.44
PEX27Q08580 YNL208WYNL208W 600 nt12.33□□□□□ -0.44
PEX27Q08580 YDJ1YNL064C 1230 nt12.32□□□□□ -0.44
PEX27Q08580 PTC2YER089C 1395 nt12.29□□□□□ -0.44
PEX27Q08580 NAB2YGL122C 1578 nt12.21□□□□□ -0.46
PEX27Q08580 SCR1SCR1 522 nt12.19□□□□□ -0.46
PEX27Q08580 YJR018WYJR018W 363 nt12.14□□□□□ -0.47
PEX27Q08580 BDF1YLR399C 2061 nt12.12□□□□□ -0.47
PEX27Q08580 RRN5YLR141W 1092 nt12.12□□□□□ -0.47
PEX27Q08580 GAR1YHR089C 618 nt12.1□□□□□ -0.47
PEX27Q08580 MEP2YNL142W 1500 nt12.06□□□□□ -0.48
PEX27Q08580 FIS1YIL065C 468 nt12.03□□□□□ -0.48
PEX27Q08580 DAL1YIR027C 1383 nt11.93□□□□□ -0.5
PEX27Q08580 TAT1YBR069C 1860 nt11.93□□□□□ -0.5
PEX27Q08580 YJR120WYJR120W 351 nt11.92□□□□□ -0.5
PEX27Q08580 YER088W-BYER088W-B 147 nt11.88□□□□□ -0.51
PEX27Q08580 DCW1YKL046C 1350 nt11.86□□□□□ -0.51
PEX27Q08580 PHO4YFR034C 939 nt11.84□□□□□ -0.51
PEX27Q08580 FPR4YLR449W 1179 nt11.84□□□□□ -0.51
PEX27Q08580 YPS1YLR120C 1710 nt11.83□□□□□ -0.52
PEX27Q08580 INM2YDR287W 879 nt11.78□□□□□ -0.52
PEX27Q08580 ATS1YAL020C 1002 nt11.76□□□□□ -0.53
PEX27Q08580 SSA1YAL005C 1929 nt11.76□□□□□ -0.53
PEX27Q08580 TIR1YER011W 765 nt11.75□□□□□ -0.53
PEX27Q08580 YBR220CYBR220C 1683 nt11.69□□□□□ -0.54
PEX27Q08580 RPP2BYDR382W 333 nt11.69□□□□□ -0.54
PEX27Q08580 YHR165W-AYHR165W-A 312 nt11.68□□□□□ -0.54
PEX27Q08580 EMI2YDR516C 1503 nt11.67□□□□□ -0.54
PEX27Q08580 YDR095CYDR095C 411 nt11.67□□□□□ -0.54
PEX27Q08580 RSB1YOR049C 1065 nt11.65□□□□□ -0.54
PEX27Q08580 YMR090WYMR090W 684 nt11.57□□□□□ -0.56
PEX27Q08580 YBL100CYBL100C 315 nt11.57□□□□□ -0.56
PEX27Q08580 YDL221WYDL221W 552 nt11.54□□□□□ -0.56
PEX27Q08580 PAC11YDR488C 1602 nt11.52□□□□□ -0.57
PEX27Q08580 SDH1YKL148C 1923 nt11.52□□□□□ -0.57
PEX27Q08580 PTP1YDL230W 1008 nt11.51□□□□□ -0.57
PEX27Q08580 CAC2YML102W 1407 nt11.51□□□□□ -0.57
PEX27Q08580 SRB2YHR041C 633 nt11.5□□□□□ -0.57
PEX27Q08580 Q0182Q0182 405 nt11.48□□□□□ -0.57
PEX27Q08580 FUN26YAL022C 1554 nt11.43□□□□□ -0.58
PEX27Q08580 RPP2AYOL039W 321 nt11.42□□□□□ -0.58
PEX27Q08580 BDH2YAL061W 1254 nt11.41□□□□□ -0.58
PEX27Q08580 PCH2YBR186W 1695 nt11.38□□□□□ -0.59
PEX27Q08580 GUT2YIL155C 1950 nt11.36□□□□□ -0.59
PEX27Q08580 SCC4YER147C 1875 nt11.35□□□□□ -0.59
PEX27Q08580 IRC15YPL017C 1500 nt11.35□□□□□ -0.59
PEX27Q08580 ALF1YNL148C 765 nt11.33□□□□□ -0.6
PEX27Q08580 SEC11YIR022W 504 nt11.31□□□□□ -0.6
PEX27Q08580 GIS3YLR094C 1509 nt11.26□□□□□ -0.61
PEX27Q08580 TRM9YML014W 840 nt11.26□□□□□ -0.61
PEX27Q08580 SIS1YNL007C 1059 nt11.26□□□□□ -0.61
PEX27Q08580 CCT6YDR188W 1641 nt11.23□□□□□ -0.61
PEX27Q08580 PIB2YGL023C 1908 nt11.23□□□□□ -0.61
PEX27Q08580 NVJ2YPR091C 2313 nt11.18□□□□□ -0.62
PEX27Q08580 GFD2YCL036W 1701 nt11.15□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms