Protein–RNA interactions for Protein: P34231

YKL187C, Uncharacterized protein YKL187C, yeastyeast

Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKL187CP34231 YML009W-BYML009W-B 477 nt17.5■□□□□ 0.39
YKL187CP34231 NSR1YGR159C 1245 nt17.21■□□□□ 0.35
YKL187CP34231 NOP1YDL014W 984 nt17.12■□□□□ 0.33
YKL187CP34231 YKL036CYKL036C 393 nt16.02■□□□□ 0.16
YKL187CP34231 Q0297Q0297 156 nt15.08■□□□□ 0
YKL187CP34231 MDJ1YFL016C 1536 nt15.02■□□□□ -0
YKL187CP34231 YJL027CYJL027C 417 nt14.99□□□□□ -0.01
YKL187CP34231 SRX1YKL086W 384 nt14.97□□□□□ -0.01
YKL187CP34231 SCS3YGL126W 1143 nt14.7□□□□□ -0.06
YKL187CP34231 YCR051WYCR051W 669 nt14.2□□□□□ -0.14
YKL187CP34231 YOL085CYOL085C 342 nt13.88□□□□□ -0.19
YKL187CP34231 PKP1YIL042C 1185 nt13.62□□□□□ -0.23
YKL187CP34231 RPP1BYDL130W 321 nt13.53□□□□□ -0.24
YKL187CP34231 DBP2YNL112W 1641 nt13.42□□□□□ -0.26
YKL187CP34231 TRN1tP(UGG)A 72 nt13.39□□□□□ -0.27
YKL187CP34231 SUF9tP(UGG)F 72 nt13.39□□□□□ -0.27
YKL187CP34231 SUF8tP(UGG)H 72 nt13.39□□□□□ -0.27
YKL187CP34231 tP(UGG)LtP(UGG)L 72 nt13.39□□□□□ -0.27
YKL187CP34231 SUF7tP(UGG)M 72 nt13.39□□□□□ -0.27
YKL187CP34231 tP(UGG)N1tP(UGG)N1 72 nt13.39□□□□□ -0.27
YKL187CP34231 tP(UGG)N2tP(UGG)N2 72 nt13.39□□□□□ -0.27
YKL187CP34231 tP(UGG)O1tP(UGG)O1 72 nt13.39□□□□□ -0.27
YKL187CP34231 SUF11tP(UGG)O2 72 nt13.39□□□□□ -0.27
YKL187CP34231 SCJ1YMR214W 1134 nt13.34□□□□□ -0.27
YKL187CP34231 ATS1YAL020C 1002 nt13.24□□□□□ -0.29
YKL187CP34231 CCC1YLR220W 969 nt13.24□□□□□ -0.29
YKL187CP34231 PET122YER153C 765 nt12.89□□□□□ -0.35
YKL187CP34231 SCR1SCR1 522 nt12.81□□□□□ -0.36
YKL187CP34231 YBR190WYBR190W 312 nt12.77□□□□□ -0.37
YKL187CP34231 tP(UGG)O3tP(UGG)O3 72 nt12.75□□□□□ -0.37
YKL187CP34231 SSA3YBL075C 1950 nt12.7□□□□□ -0.38
YKL187CP34231 RVS167YDR388W 1449 nt12.65□□□□□ -0.38
YKL187CP34231 RRN5YLR141W 1092 nt12.55□□□□□ -0.4
YKL187CP34231 RTC3YHR087W 336 nt12.48□□□□□ -0.41
YKL187CP34231 YDJ1YNL064C 1230 nt12.34□□□□□ -0.43
YKL187CP34231 RSB1YOR049C 1065 nt12.34□□□□□ -0.43
YKL187CP34231 YER088W-BYER088W-B 147 nt12.31□□□□□ -0.44
YKL187CP34231 SHR5YOL110W 714 nt12.27□□□□□ -0.45
YKL187CP34231 PST2YDR032C 597 nt12.23□□□□□ -0.45
YKL187CP34231 GAR1YHR089C 618 nt12.01□□□□□ -0.49
YKL187CP34231 DEP1YAL013W 1218 nt11.84□□□□□ -0.51
YKL187CP34231 YKL097CYKL097C 411 nt11.84□□□□□ -0.51
YKL187CP34231 URN1YPR152C 1398 nt11.78□□□□□ -0.52
YKL187CP34231 YNL208WYNL208W 600 nt11.69□□□□□ -0.54
YKL187CP34231 SHU1YHL006C 453 nt11.66□□□□□ -0.54
YKL187CP34231 RPN10YHR200W 807 nt11.66□□□□□ -0.54
YKL187CP34231 TIR1YER011W 765 nt11.6□□□□□ -0.55
YKL187CP34231 OPI9YLR338W 858 nt11.57□□□□□ -0.56
YKL187CP34231 PUT4YOR348C 1884 nt11.52□□□□□ -0.57
YKL187CP34231 SAH1YER043C 1350 nt11.42□□□□□ -0.58
YKL187CP34231 SSA1YAL005C 1929 nt11.42□□□□□ -0.58
YKL187CP34231 YAL037C-BYAL037C-B 975 nt11.39□□□□□ -0.59
YKL187CP34231 YOR139CYOR139C 393 nt11.34□□□□□ -0.59
YKL187CP34231 ARE1YCR048W 1833 nt11.28□□□□□ -0.6
YKL187CP34231 SRB2YHR041C 633 nt11.28□□□□□ -0.6
YKL187CP34231 YJR018WYJR018W 363 nt11.25□□□□□ -0.61
YKL187CP34231 PUN1YLR414C 792 nt11.23□□□□□ -0.61
YKL187CP34231 NPL3YDR432W 1245 nt11.17□□□□□ -0.62
YKL187CP34231 YGR021WYGR021W 873 nt11.14□□□□□ -0.63
YKL187CP34231 YJR120WYJR120W 351 nt11.14□□□□□ -0.63
YKL187CP34231 WWM1YFL010C 636 nt11.13□□□□□ -0.63
YKL187CP34231 HOM6YJR139C 1080 nt11.12□□□□□ -0.63
YKL187CP34231 POA1YBR022W 534 nt11.12□□□□□ -0.63
YKL187CP34231 YHR049C-AYHR049C-A 297 nt11.11□□□□□ -0.63
YKL187CP34231 RPP2BYDR382W 333 nt11.09□□□□□ -0.63
YKL187CP34231 MNP1YGL068W 585 nt11.08□□□□□ -0.64
YKL187CP34231 SSA4YER103W 1929 nt11.07□□□□□ -0.64
YKL187CP34231 PTC2YER089C 1395 nt11.05□□□□□ -0.64
YKL187CP34231 BSC6YOL137W 1494 nt11.02□□□□□ -0.65
YKL187CP34231 SPT5YML010W 3192 nt11.02□□□□□ -0.65
YKL187CP34231 YOL037CYOL037C 354 nt11□□□□□ -0.65
YKL187CP34231 YFL021C-AYFL021C-A 855 nt10.95□□□□□ -0.66
YKL187CP34231 RKM5YLR137W 1104 nt10.95□□□□□ -0.66
YKL187CP34231 BDH2YAL061W 1254 nt10.92□□□□□ -0.66
YKL187CP34231 tM(CAU)CtM(CAU)C 72 nt10.9□□□□□ -0.66
YKL187CP34231 IMT4tM(CAU)E 72 nt10.9□□□□□ -0.66
YKL187CP34231 IMT3tM(CAU)J3 72 nt10.9□□□□□ -0.66
YKL187CP34231 IMT1tM(CAU)O1 72 nt10.9□□□□□ -0.66
YKL187CP34231 IMT2tM(CAU)P 72 nt10.9□□□□□ -0.66
YKL187CP34231 NAB2YGL122C 1578 nt10.87□□□□□ -0.67
YKL187CP34231 BUD23YCR047C 828 nt10.87□□□□□ -0.67
YKL187CP34231 INM2YDR287W 879 nt10.83□□□□□ -0.68
YKL187CP34231 LSM3YLR438C-A 270 nt10.83□□□□□ -0.68
YKL187CP34231 DAL1YIR027C 1383 nt10.78□□□□□ -0.68
YKL187CP34231 YBL100CYBL100C 315 nt10.75□□□□□ -0.69
YKL187CP34231 FIS1YIL065C 468 nt10.74□□□□□ -0.69
YKL187CP34231 YLR281CYLR281C 468 nt10.74□□□□□ -0.69
YKL187CP34231 FPR4YLR449W 1179 nt10.73□□□□□ -0.69
YKL187CP34231 PUS2YGL063W 1113 nt10.71□□□□□ -0.69
YKL187CP34231 BDF1YLR399C 2061 nt10.69□□□□□ -0.7
YKL187CP34231 TRM9YML014W 840 nt10.68□□□□□ -0.7
YKL187CP34231 PHO4YFR034C 939 nt10.67□□□□□ -0.7
YKL187CP34231 WHI5YOR083W 888 nt10.67□□□□□ -0.7
YKL187CP34231 PAC11YDR488C 1602 nt10.66□□□□□ -0.7
YKL187CP34231 FUN26YAL022C 1554 nt10.65□□□□□ -0.71
YKL187CP34231 CCT6YDR188W 1641 nt10.55□□□□□ -0.72
YKL187CP34231 TAT1YBR069C 1860 nt10.55□□□□□ -0.72
YKL187CP34231 MOT3YMR070W 1473 nt10.55□□□□□ -0.72
YKL187CP34231 Q0182Q0182 405 nt10.5□□□□□ -0.73
YKL187CP34231 YLR154C-GYLR154C-G 150 nt10.48□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms