RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C ODC1Q03028 310 aa2.21□□□□□ -2.06
VPS13YLL040C YDR541CQ03049 344 aa2.21□□□□□ -2.06
VPS13YLL040C VBA4Q04602 768 aaKnown RBP2.21□□□□□ -2.06
VPS13YLL040C HOM3P10869 527 aa2.21□□□□□ -2.06
VPS13YLL040C AFG1P32317 509 aa2.21□□□□□ -2.06
VPS13YLL040C MDL1P33310 695 aa2.21□□□□□ -2.06
VPS13YLL040C AHP1P38013 176 aaKnown RBP2.21□□□□□ -2.06
VPS13YLL040C ASP1P38986 381 aaPredicted RBP2.21□□□□□ -2.06
VPS13YLL040C HXT14P42833 540 aa2.21□□□□□ -2.06
VPS13YLL040C QRI7P43122 407 aa2.21□□□□□ -2.06
VPS13YLL040C YFR020WP43600 232 aa2.21□□□□□ -2.06
VPS13YLL040C AIM24P47127 394 aa2.21□□□□□ -2.06
VPS13YLL040C CAF40P53829 373 aa2.21□□□□□ -2.06
VPS13YLL040C YLR352WQ06479 807 aa2.21□□□□□ -2.06
VPS13YLL040C GSH2Q08220 491 aa2.21□□□□□ -2.06
VPS13YLL040C UBX3Q12229 455 aa2.21□□□□□ -2.06
VPS13YLL040C CBS1P14066 229 aa2.2□□□□□ -2.06
VPS13YLL040C VPS33P20795 691 aa2.2□□□□□ -2.06
VPS13YLL040C GMH1P36125 273 aa2.2□□□□□ -2.06
VPS13YLL040C DSF2P38213 736 aa2.2□□□□□ -2.06
VPS13YLL040C IMD2P38697 523 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C PTH1P38876 190 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C CHL4P38907 458 aa2.2□□□□□ -2.06
VPS13YLL040C NNF1P47149 201 aa2.2□□□□□ -2.06
VPS13YLL040C AAT1Q01802 451 aa2.2□□□□□ -2.06
VPS13YLL040C YMR210WQ03649 449 aa2.2□□□□□ -2.06
VPS13YLL040C VAM3Q12241 283 aa2.2□□□□□ -2.06
VPS13YLL040C FYV7Q12247 151 aa2.2□□□□□ -2.06
VPS13YLL040C VMA9Q3E7B6 73 aa2.2□□□□□ -2.06
VPS13YLL040C MER1P16523 270 aa2.2□□□□□ -2.06
VPS13YLL040C NDC1P32500 655 aa2.2□□□□□ -2.06
VPS13YLL040C HBS1P32769 611 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C OAR1P35731 278 aa2.2□□□□□ -2.06
VPS13YLL040C MCM7P38132 845 aa2.2□□□□□ -2.06
VPS13YLL040C PAU15P40585 124 aa2.2□□□□□ -2.06
VPS13YLL040C CWC25P53854 179 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C VBA1Q04301 562 aa2.2□□□□□ -2.06
VPS13YLL040C ARV1Q06541 321 aa2.2□□□□□ -2.06
VPS13YLL040C ZEO1Q08245 113 aa2.2□□□□□ -2.06
VPS13YLL040C ASH1P34233 588 aa2.2□□□□□ -2.06
VPS13YLL040C LSM12P38828 187 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C TIS11P47977 285 aa2.2□□□□□ -2.06
VPS13YLL040C GNP1P48813 663 aa2.2□□□□□ -2.06
VPS13YLL040C BRX1Q08235 291 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C YOR365CQ08844 703 aa2.2□□□□□ -2.06
VPS13YLL040C PDH1Q12428 516 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C SCEIP03882 235 aa2.2□□□□□ -2.06
VPS13YLL040C APA2P22108 325 aa2.2□□□□□ -2.06
VPS13YLL040C STE50P25344 346 aa2.2□□□□□ -2.06
VPS13YLL040C SDS24P38314 527 aa2.2□□□□□ -2.06
VPS13YLL040C PZF1P39933 429 aa2.2□□□□□ -2.06
VPS13YLL040C YIR016WP40572 265 aa2.2□□□□□ -2.06
VPS13YLL040C LCL3P53153 274 aa2.2□□□□□ -2.06
VPS13YLL040C NDD1Q08887 554 aa2.2□□□□□ -2.06
VPS13YLL040C CPA1P07258 411 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C AAC3P18238 307 aa2.2□□□□□ -2.06
VPS13YLL040C RSC6P25632 483 aa2.2□□□□□ -2.06
VPS13YLL040C ARP1P38696 384 aa2.2□□□□□ -2.06
VPS13YLL040C YHR078WP38799 552 aa2.2□□□□□ -2.06
VPS13YLL040C NSG1P38837 291 aa2.2□□□□□ -2.06
VPS13YLL040C ACF4P47129 309 aa2.2□□□□□ -2.06
VPS13YLL040C SDT1P53078 280 aa2.2□□□□□ -2.06
VPS13YLL040C TIM21P53220 239 aa2.2□□□□□ -2.06
VPS13YLL040C MAL12P53341 584 aa2.2□□□□□ -2.06
VPS13YLL040C YMR206WQ03695 313 aa2.2□□□□□ -2.06
VPS13YLL040C RTK1Q12100 620 aaPredicted RBP2.2□□□□□ -2.06
VPS13YLL040C BAR1P12630 587 aa2.2□□□□□ -2.06
VPS13YLL040C BEM1P29366 551 aa2.2□□□□□ -2.06
VPS13YLL040C PMT2P31382 759 aa2.2□□□□□ -2.06
VPS13YLL040C ORC2P32833 620 aa2.2□□□□□ -2.06
VPS13YLL040C SWD1P39706 426 aa2.2□□□□□ -2.06
VPS13YLL040C GDI1P39958 451 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C NCS6P53088 359 aa2.2□□□□□ -2.06
VPS13YLL040C MRPL22P53881 309 aa2.2□□□□□ -2.06
VPS13YLL040C FDC1Q03034 503 aa2.2□□□□□ -2.06
VPS13YLL040C SNZ1Q03148 297 aa2.2□□□□□ -2.06
VPS13YLL040C SPG3Q04398 127 aaPredicted RBP2.2□□□□□ -2.06
VPS13YLL040C HPF1Q05164 967 aa2.2□□□□□ -2.06
VPS13YLL040C RSC58Q07979 502 aa2.2□□□□□ -2.06
VPS13YLL040C RPN5Q12250 445 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C TY1A-NL1Q12391 440 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C RPB5P20434 215 aa2.2□□□□□ -2.06
VPS13YLL040C CHL1P22516 861 aaPredicted RBP2.2□□□□□ -2.06
VPS13YLL040C VPS34P22543 875 aa2.2□□□□□ -2.06
VPS13YLL040C POT1P27796 417 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
VPS13YLL040C SEC17P32602 292 aa2.2□□□□□ -2.06
VPS13YLL040C GPP1P41277 250 aaKnown RBP2.2□□□□□ -2.06
VPS13YLL040C SCS3P53012 380 aa2.2□□□□□ -2.06
VPS13YLL040C YNL140CP53910 189 aa2.2□□□□□ -2.06
VPS13YLL040C RHO4Q00246 291 aa2.2□□□□□ -2.06
VPS13YLL040C MRPS17Q03246 237 aaPredicted RBP2.2□□□□□ -2.06
VPS13YLL040C YTM1Q12024 460 aaPredicted RBP2.2□□□□□ -2.06
VPS13YLL040C PDA1P16387 420 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C YMC1P32331 307 aa2.19□□□□□ -2.06
VPS13YLL040C EFM1P38732 585 aa2.19□□□□□ -2.06
VPS13YLL040C CTF8P38877 133 aa2.19□□□□□ -2.06
VPS13YLL040C AIM10P39965 576 aaKnown RBP2.19□□□□□ -2.06
VPS13YLL040C PGD1P40356 397 aa2.19□□□□□ -2.06
VPS13YLL040C RIF2Q06208 395 aa2.19□□□□□ -2.06
VPS13YLL040C UPC2Q12151 913 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms