RNA–Protein interactions for RNA: YLL035W

GRC3, Transcript of Polynucleotide kinase present on rDNA, yeast

Gene GRC3, Length 1,899 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GRC3	YLL035W	PUP3	P25451	205 aa	Known RBP	4.16	□□□□□ -1.74
GRC3	YLL035W	PEX34	P25584	144 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	BUB2	P26448	306 aa	Predicted RBP	4.16	□□□□□ -1.74
GRC3	YLL035W	SPS19	P32573	292 aa	Known RBP	4.16	□□□□□ -1.74
GRC3	YLL035W	CAT2	P32796	670 aa	Known RBP	4.16	□□□□□ -1.74
GRC3	YLL035W	LIP5	P32875	414 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	SKG6	P32900	734 aa	Predicted RBP	4.16	□□□□□ -1.74
GRC3	YLL035W	DTR1	P38125	572 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	ROT2	P38138	954 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	FIG1	P38224	298 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	SHE3	P38272	425 aa	Known RBP	4.16	□□□□□ -1.74
GRC3	YLL035W	TOS1	P38288	455 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	PEX28	P38848	579 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	YAR028W	P39548	234 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	GDI1	P39958	451 aa	Known RBP	4.16	□□□□□ -1.74
GRC3	YLL035W	POG1	P40473	351 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	YGL159W	P53110	370 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	ARG5,6	Q01217	863 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	CDC123	Q05791	360 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	YLR422W	Q06409	1932 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	AIM6	Q07716	390 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	FDH1	Q08911	376 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	VAM3	Q12241	283 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	YPR071W	Q12346	211 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	ISA2	Q12425	185 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	RMD5	Q12508	421 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	MHT1	Q12525	324 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	MOT1	P32333	1867 aa		4.16	□□□□□ -1.74
GRC3	YLL035W	RPS21A	P0C0V8	87 aa	Known RBP	4.15	□□□□□ -1.74
GRC3	YLL035W	NAM2	P11325	894 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	SEC12	P11655	471 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	RHB1	P25378	209 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	YCR102C	P25608	368 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	PHO91	P27514	894 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	LDH1	P38139	375 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	HSL7	P38274	827 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	ATG12	P38316	186 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	YPT31	P38555	223 aa	Known RBP	4.15	□□□□□ -1.74
GRC3	YLL035W	RCK1	P38622	512 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	LCB2	P40970	561 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	BAP3	P41815	604 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	YJR012C	P47087	207 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	DAN1	P47178	298 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	HXT16	P47185	567 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	NUP57	P48837	541 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	YGL185C	P53100	379 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	ERV29	P53337	310 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	MKC7	P53379	596 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	MPA43	P53583	542 aa	Predicted RBP	4.15	□□□□□ -1.74
GRC3	YLL035W	TOF2	Q02208	771 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	YDR248C	Q03786	193 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	DOT1	Q04089	582 aa	Known RBP	4.15	□□□□□ -1.74
GRC3	YLL035W	HLR1	Q04429	423 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	SHH3	Q04487	196 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	MSC3	Q05812	728 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	ATG33	Q06485	197 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	SDO1	Q07953	250 aa	Known RBP	4.15	□□□□□ -1.74
GRC3	YLL035W	IZH3	Q07959	543 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	YPL257W	Q08974	193 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	PSF1	Q12488	208 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	COA6	Q3E846	104 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	YIL177C	P40434	1758 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	YJL225C	P40889	1758 aa		4.15	□□□□□ -1.74
GRC3	YLL035W	AI1	P03875	834 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	HXK2	P04807	486 aa	Known RBP	4.15	□□□□□ -1.75
GRC3	YLL035W	NHP6A	P11632	93 aa	Known RBP	4.15	□□□□□ -1.75
GRC3	YLL035W	RPB3	P16370	318 aa	Known RBP	4.15	□□□□□ -1.75
GRC3	YLL035W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
GRC3	YLL035W	NAR1	P23503	491 aa	Known RBP	4.15	□□□□□ -1.75
GRC3	YLL035W	STE50	P25344	346 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	CYS3	P31373	394 aa	Known RBP	4.15	□□□□□ -1.75
GRC3	YLL035W	SKT5	P34226	696 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	TVP38	P36164	337 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	MRPL28	P36527	147 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	FLR1	P38124	548 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	EHT1	P38295	451 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	EFM1	P38732	585 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	FMO1	P38866	432 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	AIM46	P38885	310 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	FIR1	P40020	876 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	BUR6	P40096	142 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	NAS2	P40555	220 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	CAK1	P43568	368 aa	Predicted RBP	4.15	□□□□□ -1.75
GRC3	YLL035W	PTR3	P43606	678 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	TAD2	P47058	250 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	TAH11	P47112	604 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	YJR149W	P47177	404 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	GCV1	P48015	400 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	ROG1	P53118	685 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	COG7	P53195	279 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	YNL181W	P53878	407 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	ROD1	Q02805	837 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	CTK1	Q03957	528 aa	Known RBP	4.15	□□□□□ -1.75
GRC3	YLL035W	ATC1	Q04005	294 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	YMR130W	Q04223	302 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	YPR027C	Q12079	277 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	YDL199C	Q12407	687 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	FSH3	Q99369	266 aa		4.15	□□□□□ -1.75
GRC3	YLL035W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
GRC3	YLL035W	PRP45	P28004	379 aa	Predicted RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 42 ms