Protein–RNA interactions for Protein: P48837

NUP57, Nucleoporin NUP57, yeastyeast

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP57P48837 NSR1YGR159C 1245 nt18.81■□□□□ 0.6
NUP57P48837 YML009W-BYML009W-B 477 nt18.74■□□□□ 0.59
NUP57P48837 NOP1YDL014W 984 nt18.15■□□□□ 0.5
NUP57P48837 MDJ1YFL016C 1536 nt16.89■□□□□ 0.29
NUP57P48837 YKL036CYKL036C 393 nt16.53■□□□□ 0.24
NUP57P48837 SRX1YKL086W 384 nt15.84■□□□□ 0.13
NUP57P48837 Q0297Q0297 156 nt15.79■□□□□ 0.12
NUP57P48837 YJL027CYJL027C 417 nt15.59■□□□□ 0.09
NUP57P48837 YCR051WYCR051W 669 nt15.02■□□□□ -0
NUP57P48837 SCS3YGL126W 1143 nt14.91□□□□□ -0.02
NUP57P48837 DBP2YNL112W 1641 nt14.84□□□□□ -0.03
NUP57P48837 YBR190WYBR190W 312 nt14.47□□□□□ -0.09
NUP57P48837 TRN1tP(UGG)A 72 nt14.44□□□□□ -0.1
NUP57P48837 SUF9tP(UGG)F 72 nt14.44□□□□□ -0.1
NUP57P48837 SUF8tP(UGG)H 72 nt14.44□□□□□ -0.1
NUP57P48837 tP(UGG)LtP(UGG)L 72 nt14.44□□□□□ -0.1
NUP57P48837 SUF7tP(UGG)M 72 nt14.44□□□□□ -0.1
NUP57P48837 tP(UGG)N1tP(UGG)N1 72 nt14.44□□□□□ -0.1
NUP57P48837 tP(UGG)N2tP(UGG)N2 72 nt14.44□□□□□ -0.1
NUP57P48837 tP(UGG)O1tP(UGG)O1 72 nt14.44□□□□□ -0.1
NUP57P48837 SUF11tP(UGG)O2 72 nt14.44□□□□□ -0.1
NUP57P48837 YOL085CYOL085C 342 nt14.31□□□□□ -0.12
NUP57P48837 CCC1YLR220W 969 nt14.3□□□□□ -0.12
NUP57P48837 RPP1BYDL130W 321 nt14.18□□□□□ -0.14
NUP57P48837 RTC3YHR087W 336 nt14.15□□□□□ -0.14
NUP57P48837 PKP1YIL042C 1185 nt14.12□□□□□ -0.15
NUP57P48837 RVS167YDR388W 1449 nt13.96□□□□□ -0.18
NUP57P48837 SCJ1YMR214W 1134 nt13.79□□□□□ -0.2
NUP57P48837 tP(UGG)O3tP(UGG)O3 72 nt13.59□□□□□ -0.23
NUP57P48837 PET122YER153C 765 nt13.55□□□□□ -0.24
NUP57P48837 SHR5YOL110W 714 nt13.4□□□□□ -0.26
NUP57P48837 SCR1SCR1 522 nt13.39□□□□□ -0.27
NUP57P48837 ATS1YAL020C 1002 nt13.29□□□□□ -0.28
NUP57P48837 PUT4YOR348C 1884 nt13.29□□□□□ -0.28
NUP57P48837 SSA3YBL075C 1950 nt13.23□□□□□ -0.29
NUP57P48837 URN1YPR152C 1398 nt13.16□□□□□ -0.3
NUP57P48837 RRN5YLR141W 1092 nt13.15□□□□□ -0.3
NUP57P48837 YDJ1YNL064C 1230 nt13.15□□□□□ -0.3
NUP57P48837 DEP1YAL013W 1218 nt13.08□□□□□ -0.32
NUP57P48837 OPI9YLR338W 858 nt13.01□□□□□ -0.33
NUP57P48837 ARE1YCR048W 1833 nt12.98□□□□□ -0.33
NUP57P48837 SAH1YER043C 1350 nt12.97□□□□□ -0.33
NUP57P48837 RPN10YHR200W 807 nt12.94□□□□□ -0.34
NUP57P48837 YER088W-BYER088W-B 147 nt12.89□□□□□ -0.35
NUP57P48837 GAR1YHR089C 618 nt12.89□□□□□ -0.35
NUP57P48837 YNL208WYNL208W 600 nt12.87□□□□□ -0.35
NUP57P48837 POA1YBR022W 534 nt12.86□□□□□ -0.35
NUP57P48837 YHR049C-AYHR049C-A 297 nt12.83□□□□□ -0.36
NUP57P48837 RSB1YOR049C 1065 nt12.82□□□□□ -0.36
NUP57P48837 PUN1YLR414C 792 nt12.64□□□□□ -0.39
NUP57P48837 BSC6YOL137W 1494 nt12.61□□□□□ -0.39
NUP57P48837 YJR018WYJR018W 363 nt12.54□□□□□ -0.4
NUP57P48837 BUD23YCR047C 828 nt12.53□□□□□ -0.4
NUP57P48837 PTC2YER089C 1395 nt12.51□□□□□ -0.41
NUP57P48837 TIR1YER011W 765 nt12.47□□□□□ -0.41
NUP57P48837 NAB2YGL122C 1578 nt12.39□□□□□ -0.43
NUP57P48837 SSA1YAL005C 1929 nt12.35□□□□□ -0.43
NUP57P48837 PST2YDR032C 597 nt12.33□□□□□ -0.44
NUP57P48837 YJR120WYJR120W 351 nt12.26□□□□□ -0.45
NUP57P48837 RPP2BYDR382W 333 nt12.25□□□□□ -0.45
NUP57P48837 DAL1YIR027C 1383 nt12.18□□□□□ -0.46
NUP57P48837 FIS1YIL065C 468 nt12.16□□□□□ -0.46
NUP57P48837 SPT5YML010W 3192 nt12.16□□□□□ -0.46
NUP57P48837 FPR4YLR449W 1179 nt12.15□□□□□ -0.46
NUP57P48837 INM2YDR287W 879 nt12.13□□□□□ -0.47
NUP57P48837 SRB2YHR041C 633 nt12.07□□□□□ -0.48
NUP57P48837 PHO4YFR034C 939 nt12.06□□□□□ -0.48
NUP57P48837 YBL100CYBL100C 315 nt11.98□□□□□ -0.49
NUP57P48837 BDH2YAL061W 1254 nt11.95□□□□□ -0.5
NUP57P48837 YPS1YLR120C 1710 nt11.9□□□□□ -0.5
NUP57P48837 WWM1YFL010C 636 nt11.88□□□□□ -0.51
NUP57P48837 SHU1YHL006C 453 nt11.88□□□□□ -0.51
NUP57P48837 MEP2YNL142W 1500 nt11.86□□□□□ -0.51
NUP57P48837 SSA4YER103W 1929 nt11.83□□□□□ -0.52
NUP57P48837 FUN26YAL022C 1554 nt11.82□□□□□ -0.52
NUP57P48837 YHR165W-AYHR165W-A 312 nt11.79□□□□□ -0.52
NUP57P48837 YDR095CYDR095C 411 nt11.78□□□□□ -0.52
NUP57P48837 YGR021WYGR021W 873 nt11.77□□□□□ -0.53
NUP57P48837 TRM9YML014W 840 nt11.77□□□□□ -0.53
NUP57P48837 YAL037C-BYAL037C-B 975 nt11.76□□□□□ -0.53
NUP57P48837 LSM3YLR438C-A 270 nt11.76□□□□□ -0.53
NUP57P48837 YKL097CYKL097C 411 nt11.75□□□□□ -0.53
NUP57P48837 YFL021C-AYFL021C-A 855 nt11.71□□□□□ -0.53
NUP57P48837 ALF1YNL148C 765 nt11.71□□□□□ -0.53
NUP57P48837 HOM6YJR139C 1080 nt11.69□□□□□ -0.54
NUP57P48837 DCW1YKL046C 1350 nt11.67□□□□□ -0.54
NUP57P48837 CCT6YDR188W 1641 nt11.65□□□□□ -0.54
NUP57P48837 MNP1YGL068W 585 nt11.6□□□□□ -0.55
NUP57P48837 SUF2tP(AGG)C 72 nt11.59□□□□□ -0.55
NUP57P48837 SUF10tP(AGG)N 72 nt11.59□□□□□ -0.55
NUP57P48837 RPP2AYOL039W 321 nt11.58□□□□□ -0.56
NUP57P48837 EMI2YDR516C 1503 nt11.53□□□□□ -0.56
NUP57P48837 PTP1YDL230W 1008 nt11.52□□□□□ -0.57
NUP57P48837 RKM5YLR137W 1104 nt11.52□□□□□ -0.57
NUP57P48837 SIS1YNL007C 1059 nt11.52□□□□□ -0.57
NUP57P48837 YMR090WYMR090W 684 nt11.5□□□□□ -0.57
NUP57P48837 CAC2YML102W 1407 nt11.46□□□□□ -0.57
NUP57P48837 YDL221WYDL221W 552 nt11.43□□□□□ -0.58
NUP57P48837 BDF1YLR399C 2061 nt11.37□□□□□ -0.59
NUP57P48837 YBR220CYBR220C 1683 nt11.36□□□□□ -0.59
Retrieved 100 of 7,029 protein–RNA pairs in 267.9 ms