RNA–Protein interactions for RNA: YLL035W

GRC3, Transcript of Polynucleotide kinase present on rDNA, yeastyeast

Gene GRC3, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GRC3YLL035W FAP1P53971 965 aa8.37□□□□□ -1.07
GRC3YLL035W MTC1P47018 478 aaKnown RBP8.34□□□□□ -1.07
GRC3YLL035W DRS1P32892 752 aaKnown RBP8.17□□□□□ -1.1
GRC3YLL035W PRY3P47033 881 aa7.89□□□□□ -1.15
GRC3YLL035W AAD16Q02895 342 aa7.43□□□□□ -1.22
GRC3YLL035W PRI1P10363 409 aa7.36□□□□□ -1.23
GRC3YLL035W YCK3P39962 524 aa7.34□□□□□ -1.23
GRC3YLL035W HAA1Q12753 694 aaKnown RBP7.32□□□□□ -1.24
GRC3YLL035W TFA1P36100 482 aa7.27□□□□□ -1.25
GRC3YLL035W RQC2Q12532 1038 aaKnown RBP7.06□□□□□ -1.28
GRC3YLL035W BFR2Q06631 534 aaKnown RBP7.04□□□□□ -1.28
GRC3YLL035W ISW2Q08773 1120 aa6.98□□□□□ -1.29
GRC3YLL035W TAF7Q05021 590 aa6.96□□□□□ -1.29
GRC3YLL035W DIP2Q12220 943 aaPredicted RBP6.96□□□□□ -1.29
GRC3YLL035W TSR3Q12094 313 aaKnown RBP6.94□□□□□ -1.3
GRC3YLL035W RPG1P38249 964 aaKnown RBP6.93□□□□□ -1.3
GRC3YLL035W AVT3P36062 692 aa6.85□□□□□ -1.31
GRC3YLL035W MRPL32P25348 183 aa6.67□□□□□ -1.34
GRC3YLL035W YGL015CP33199 130 aa6.62□□□□□ -1.35
GRC3YLL035W RSE1Q04693 1361 aaKnown RBP6.59□□□□□ -1.35
GRC3YLL035W NOP2P40991 618 aaKnown RBP6.48□□□□□ -1.37
GRC3YLL035W BUD31P25337 157 aaPredicted RBP6.43□□□□□ -1.38
GRC3YLL035W RPL17AP05740 184 aaKnown RBP6.39□□□□□ -1.39
GRC3YLL035W RPL17BP46990 184 aaKnown RBP6.39□□□□□ -1.39
GRC3YLL035W DMA1P38823 416 aa6.37□□□□□ -1.39
GRC3YLL035W REB1P21538 810 aa6.32□□□□□ -1.4
GRC3YLL035W EBP2P36049 427 aaKnown RBP6.31□□□□□ -1.4
GRC3YLL035W LEO1P38439 464 aa6.31□□□□□ -1.4
GRC3YLL035W CAB3P36076 571 aa6.3□□□□□ -1.4
GRC3YLL035W URN1Q06525 465 aaKnown RBP6.24□□□□□ -1.41
GRC3YLL035W NSR1P27476 414 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
GRC3YLL035W SPT21P35209 758 aa6.16□□□□□ -1.42
GRC3YLL035W CDC27P38042 758 aa6.16□□□□□ -1.42
GRC3YLL035W SIS2P36024 562 aa6.15□□□□□ -1.42
GRC3YLL035W SKI3P17883 1432 aaKnown RBP6.11□□□□□ -1.43
GRC3YLL035W YKR023WP36119 530 aaKnown RBP6.09□□□□□ -1.44
GRC3YLL035W UBP10P53874 792 aaPredicted RBP6.09□□□□□ -1.44
GRC3YLL035W SPA2P23201 1466 aaKnown RBP6.08□□□□□ -1.44
GRC3YLL035W SIS1P25294 352 aaKnown RBP6.08□□□□□ -1.44
GRC3YLL035W MAP2P38174 421 aaKnown RBP6.07□□□□□ -1.44
GRC3YLL035W YPR148CQ06523 435 aa6.01□□□□□ -1.45
GRC3YLL035W RIM101P33400 625 aa5.98□□□□□ -1.45
GRC3YLL035W HOP09932 586 aa5.94□□□□□ -1.46
GRC3YLL035W UBP9P39967 754 aa5.94□□□□□ -1.46
GRC3YLL035W DCD1P06773 312 aa5.94□□□□□ -1.46
GRC3YLL035W TFC8Q12308 588 aa5.94□□□□□ -1.46
GRC3YLL035W SSN2P38931 1420 aa5.91□□□□□ -1.46
GRC3YLL035W YFR016CP43597 1233 aaKnown RBP5.89□□□□□ -1.47
GRC3YLL035W TIF4632P39936 914 aaKnown RBP5.88□□□□□ -1.47
GRC3YLL035W LEU3P08638 886 aa5.87□□□□□ -1.47
GRC3YLL035W OXP1P28273 1286 aa5.84□□□□□ -1.47
GRC3YLL035W SGS1P35187 1447 aa5.84□□□□□ -1.47
GRC3YLL035W ENP1P38333 483 aaKnown RBP5.83□□□□□ -1.48
GRC3YLL035W PTP3P40048 928 aa5.83□□□□□ -1.48
GRC3YLL035W TGL3P40308 642 aa5.83□□□□□ -1.48
GRC3YLL035W RPS0BP46654 252 aaKnown RBP5.83□□□□□ -1.48
GRC3YLL035W TCB2P48231 1178 aa5.83□□□□□ -1.48
GRC3YLL035W TCB3Q03640 1545 aaKnown RBP5.82□□□□□ -1.48
GRC3YLL035W NAP1P25293 417 aaKnown RBP5.82□□□□□ -1.48
GRC3YLL035W SCY1P53009 804 aa5.81□□□□□ -1.48
GRC3YLL035W DMA2P53924 522 aa5.81□□□□□ -1.48
GRC3YLL035W IFH1P39520 1085 aa5.8□□□□□ -1.48
GRC3YLL035W IOC4Q04213 475 aa5.79□□□□□ -1.48
GRC3YLL035W SLX5P32828 619 aaKnown RBP5.78□□□□□ -1.48
GRC3YLL035W YAH1Q12184 172 aaKnown RBP5.78□□□□□ -1.48
GRC3YLL035W ABP1P15891 592 aaKnown RBP5.77□□□□□ -1.49
GRC3YLL035W AIM44Q99299 758 aa5.77□□□□□ -1.49
GRC3YLL035W BCH2P36122 765 aa5.76□□□□□ -1.49
GRC3YLL035W MNN4P36044 1178 aa5.75□□□□□ -1.49
GRC3YLL035W YIL055CP40523 627 aaKnown RBP5.73□□□□□ -1.49
GRC3YLL035W SAS10Q12136 610 aaPredicted RBP5.72□□□□□ -1.49
GRC3YLL035W CLC1P17891 233 aa5.71□□□□□ -1.5
GRC3YLL035W CWC22P53333 577 aaKnown RBP5.71□□□□□ -1.5
GRC3YLL035W STH1P32597 1359 aa5.7□□□□□ -1.5
GRC3YLL035W SSP1P38871 571 aa5.69□□□□□ -1.5
GRC3YLL035W RLF2Q12495 606 aa5.69□□□□□ -1.5
GRC3YLL035W YRB30P53107 440 aaPredicted RBP5.68□□□□□ -1.5
GRC3YLL035W QCR6P00127 147 aa5.67□□□□□ -1.5
GRC3YLL035W YLR271WQ06152 274 aa5.67□□□□□ -1.5
GRC3YLL035W KRI1P42846 591 aaKnown RBP5.66□□□□□ -1.5
GRC3YLL035W CHD1P32657 1468 aa5.65□□□□□ -1.5
GRC3YLL035W IME2P32581 645 aa5.65□□□□□ -1.5
GRC3YLL035W ORC1P54784 914 aaPredicted RBP5.65□□□□□ -1.5
GRC3YLL035W SEC3P33332 1336 aaKnown RBP5.65□□□□□ -1.51
GRC3YLL035W NOP53Q12080 455 aaKnown RBP5.64□□□□□ -1.51
GRC3YLL035W MMS22Q06164 1454 aa5.63□□□□□ -1.51
GRC3YLL035W RPN1P38764 993 aaKnown RBP5.62□□□□□ -1.51
GRC3YLL035W RSM7P47150 247 aa5.62□□□□□ -1.51
GRC3YLL035W UFD4P33202 1483 aa5.62□□□□□ -1.51
GRC3YLL035W PRS1P32895 427 aaKnown RBP5.62□□□□□ -1.51
GRC3YLL035W NUG1P40010 520 aaKnown RBP5.62□□□□□ -1.51
GRC3YLL035W DEF1P35732 738 aaKnown RBP5.61□□□□□ -1.51
GRC3YLL035W ENV11P53246 860 aa5.61□□□□□ -1.51
GRC3YLL035W YGR130CP53278 816 aa5.61□□□□□ -1.51
GRC3YLL035W FPR3P38911 411 aaKnown RBP5.6□□□□□ -1.51
GRC3YLL035W EPS1P40557 701 aa5.6□□□□□ -1.51
GRC3YLL035W BDF1P35817 686 aa5.59□□□□□ -1.51
GRC3YLL035W POL5P39985 1022 aaKnown RBP5.59□□□□□ -1.51
GRC3YLL035W SPT7P35177 1332 aa5.59□□□□□ -1.51
GRC3YLL035W SPP41P38904 1435 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms