RNA–Protein interactions for RNA: YDL191W

RPL35A, Transcript of Ribosomal 60S subunit protein L35A, yeast

Gene RPL35A, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL35A	YDL191W	FEX2	Q08991	375 aa		0.92	□□□□□ -2.26
RPL35A	YDL191W	IES3	Q12345	250 aa		0.92	□□□□□ -2.26
RPL35A	YDL191W	RFT1	P38206	574 aa	Predicted RBP	0.91	□□□□□ -2.26
RPL35A	YDL191W	SMF2	P38778	549 aa		0.91	□□□□□ -2.26
RPL35A	YDL191W	FMP48	P53233	369 aa		0.91	□□□□□ -2.26
RPL35A	YDL191W	RET3	P53600	189 aa		0.91	□□□□□ -2.26
RPL35A	YDL191W	ISA2	Q12425	185 aa		0.91	□□□□□ -2.26
RPL35A	YDL191W	ADH3	P07246	375 aa	Known RBP	0.9	□□□□□ -2.27
RPL35A	YDL191W	CSE1	P33307	960 aa		0.9	□□□□□ -2.27
RPL35A	YDL191W	JNM1	P36224	373 aa		0.9	□□□□□ -2.27
RPL35A	YDL191W	SRP72	P38688	640 aa	Known RBP	0.9	□□□□□ -2.27
RPL35A	YDL191W	ASP1	P38986	381 aa	Predicted RBP	0.9	□□□□□ -2.27
RPL35A	YDL191W	YER084W	P40057	128 aa		0.9	□□□□□ -2.27
RPL35A	YDL191W	SLM1	P40485	686 aa		0.9	□□□□□ -2.27
RPL35A	YDL191W	LST7	P53237	242 aa		0.9	□□□□□ -2.27
RPL35A	YDL191W	TAF10	Q12030	206 aa		0.9	□□□□□ -2.27
RPL35A	YDL191W	FAR1	P21268	830 aa		0.89	□□□□□ -2.27
RPL35A	YDL191W	MSK1	P32048	576 aa		0.89	□□□□□ -2.27
RPL35A	YDL191W	YKL187C	P34231	750 aa		0.89	□□□□□ -2.27
RPL35A	YDL191W	LCB2	P40970	561 aa		0.89	□□□□□ -2.27
RPL35A	YDL191W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.89	□□□□□ -2.27	not detected
RPL35A	YDL191W	GPM3	Q12326	303 aa		0.89	□□□□□ -2.27
RPL35A	YDL191W	CLB6	P32943	380 aa		0.88	□□□□□ -2.27
RPL35A	YDL191W	YBL028C	P38202	106 aa		0.88	□□□□□ -2.27
RPL35A	YDL191W	LCP5	P40079	357 aa	Predicted RBP	0.88	□□□□□ -2.27
RPL35A	YDL191W	SYF2	P53277	215 aa	Predicted RBP	0.88	□□□□□ -2.27
RPL35A	YDL191W	YNL040W	P53960	456 aa	Predicted RBP	0.88	□□□□□ -2.27
RPL35A	YDL191W	SPC19	Q03954	165 aa		0.88	□□□□□ -2.27
RPL35A	YDL191W	TRM10	Q12400	293 aa		0.88	□□□□□ -2.27
RPL35A	YDL191W	TFC7	Q12415	435 aa		0.88	□□□□□ -2.27
RPL35A	YDL191W	MHP1	P43638	1398 aa		0.87	□□□□□ -2.27
RPL35A	YDL191W	MRPL20	P22354	195 aa	Predicted RBP	0.87	□□□□□ -2.27
RPL35A	YDL191W	YEL043W	P32618	956 aa		0.87	□□□□□ -2.27
RPL35A	YDL191W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	not detected
RPL35A	YDL191W	LSG1	P53145	640 aa	Known RBP	0.87	□□□□□ -2.27
RPL35A	YDL191W	SDS23	P53172	527 aa		0.87	□□□□□ -2.27
RPL35A	YDL191W	CGI121	Q03705	181 aa	Known RBP	0.87	□□□□□ -2.27
RPL35A	YDL191W	SPH1	Q06160	661 aa		0.87	□□□□□ -2.27
RPL35A	YDL191W	RPN5	Q12250	445 aa	Known RBP	0.87	□□□□□ -2.27
RPL35A	YDL191W	YOL163W	P0CF20	169 aa		0.86	□□□□□ -2.27
RPL35A	YDL191W	DAP2	P18962	818 aa		0.86	□□□□□ -2.27
RPL35A	YDL191W	ARF2	P19146	181 aa	Known RBP	0.86	□□□□□ -2.27
RPL35A	YDL191W	DBR1	P24309	405 aa	Known RBP	0.86	□□□□□ -2.27
RPL35A	YDL191W	CAB3	P36076	571 aa		0.86	□□□□□ -2.27
RPL35A	YDL191W	MLH1	P38920	769 aa		0.86	□□□□□ -2.27
RPL35A	YDL191W	DSE1	P40077	573 aa		0.86	□□□□□ -2.27
RPL35A	YDL191W	YER188W	P40103	239 aa		0.86	□□□□□ -2.27
RPL35A	YDL191W	PMT4	P46971	762 aa		0.86	□□□□□ -2.27
RPL35A	YDL191W	ACT1	P60010	375 aa	Known RBP	0.86	□□□□□ -2.27
RPL35A	YDL191W	YPR078C	Q06813	372 aa		0.86	□□□□□ -2.27
RPL35A	YDL191W	BUD21	Q08492	214 aa	Predicted RBP	0.86	□□□□□ -2.27
RPL35A	YDL191W	SPE3	Q12074	293 aa	Known RBP	0.86	□□□□□ -2.27
RPL35A	YDL191W	RPN6	Q12377	434 aa		0.86	□□□□□ -2.27
RPL35A	YDL191W	ERP3	Q12403	225 aa		0.86	□□□□□ -2.27
RPL35A	YDL191W	FSH3	Q99369	266 aa		0.86	□□□□□ -2.27
RPL35A	YDL191W	RPL1A	P0CX43	217 aa	Known RBP	0.85	□□□□□ -2.27
RPL35A	YDL191W	RPL1B	P0CX44	217 aa	Known RBP	0.85	□□□□□ -2.27
RPL35A	YDL191W	PHO80	P20052	293 aa		0.85	□□□□□ -2.27
RPL35A	YDL191W	ATG7	P38862	630 aa		0.85	□□□□□ -2.27
RPL35A	YDL191W	SNL1	P40548	159 aa		0.85	□□□□□ -2.27
RPL35A	YDL191W	TPC1	P53257	314 aa		0.85	□□□□□ -2.27
RPL35A	YDL191W	AQR1	P53943	586 aa		0.85	□□□□□ -2.27
RPL35A	YDL191W	CSM3	Q04659	317 aa		0.85	□□□□□ -2.27
RPL35A	YDL191W	PEX27	Q08580	376 aa		0.85	□□□□□ -2.27
RPL35A	YDL191W	YAK1	P14680	807 aa		0.84	□□□□□ -2.27
RPL35A	YDL191W	PSO2	P30620	661 aa		0.84	□□□□□ -2.27
RPL35A	YDL191W	NRG2	P38082	220 aa		0.84	□□□□□ -2.27
RPL35A	YDL191W	EDC2	P40023	145 aa	Predicted RBP	0.84	□□□□□ -2.27
RPL35A	YDL191W	EPL1	P43572	832 aa		0.84	□□□□□ -2.27
RPL35A	YDL191W	MPS2	P53159	387 aa		0.84	□□□□□ -2.27
RPL35A	YDL191W	UBX2	Q04228	584 aa		0.84	□□□□□ -2.27
RPL35A	YDL191W	AIM33	Q04516	312 aa		0.84	□□□□□ -2.27
RPL35A	YDL191W	TY3A-G	Q12173	290 aa		0.84	□□□□□ -2.27
RPL35A	YDL191W	TIM22	Q12328	207 aa		0.84	□□□□□ -2.27
RPL35A	YDL191W	TY3A-I	Q99219	290 aa		0.84	□□□□□ -2.27
RPL35A	YDL191W	RPS16A	P0CX51	143 aa	Known RBP	0.83	□□□□□ -2.28
RPL35A	YDL191W	RPS16B	P0CX52	143 aa	Known RBP	0.83	□□□□□ -2.28
RPL35A	YDL191W	GRR1	P24814	1151 aa		0.83	□□□□□ -2.28
RPL35A	YDL191W	MRPS5	P33759	307 aa		0.83	□□□□□ -2.28
RPL35A	YDL191W	KTI12	P34253	313 aa	Known RBP	0.83	□□□□□ -2.28
RPL35A	YDL191W	POP2	P39008	433 aa		0.83	□□□□□ -2.28
RPL35A	YDL191W	UFD1	P53044	361 aa		0.83	□□□□□ -2.28
RPL35A	YDL191W	CIK1	Q01649	594 aa		0.83	□□□□□ -2.28
RPL35A	YDL191W	SMP3	Q04174	516 aa		0.83	□□□□□ -2.28
RPL35A	YDL191W	CBP2	P03874	630 aa	Predicted RBP	0.82	□□□□□ -2.28
RPL35A	YDL191W	CKI1	P20485	582 aa		0.82	□□□□□ -2.28
RPL35A	YDL191W	VPS1	P21576	704 aa	Known RBP	0.82	□□□□□ -2.28
RPL35A	YDL191W	PRE7	P23724	241 aa	Known RBP	0.82	□□□□□ -2.28
RPL35A	YDL191W	ERG9	P29704	444 aa		0.82	□□□□□ -2.28
RPL35A	YDL191W	DSK2	P48510	373 aa		0.82	□□□□□ -2.28
RPL35A	YDL191W	NAT4	Q04751	285 aa		0.82	□□□□□ -2.28
RPL35A	YDL191W	DTD1	Q07648	150 aa	Known RBP	0.82	□□□□□ -2.28
RPL35A	YDL191W	APC5	Q08683	685 aa		0.82	□□□□□ -2.28
RPL35A	YDL191W	CDC42	P19073	191 aa		0.81	□□□□□ -2.28
RPL35A	YDL191W	RRT12	P25381	491 aa		0.81	□□□□□ -2.28
RPL35A	YDL191W	MPE1	P35728	441 aa	Known RBP	0.81	□□□□□ -2.28
RPL35A	YDL191W	YHL044W	P38727	235 aa		0.81	□□□□□ -2.28
RPL35A	YDL191W	HCH1	P53834	153 aa		0.81	□□□□□ -2.28
RPL35A	YDL191W	GYL1	Q04322	720 aa		0.81	□□□□□ -2.28
RPL35A	YDL191W	MYO5	Q04439	1219 aa	Known RBP	0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 91.2 ms