RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W GPX1P36014 167 aa1.56□□□□□ -2.16
SNF5YBR289W FET3P38993 636 aa1.56□□□□□ -2.16
SNF5YBR289W MNN9P39107 395 aaKnown RBP1.56□□□□□ -2.16
SNF5YBR289W SNL1P40548 159 aa1.56□□□□□ -2.16
SNF5YBR289W YFR057WP43625 151 aa1.56□□□□□ -2.16
SNF5YBR289W TAF6P53040 516 aa1.56□□□□□ -2.16
SNF5YBR289W CLD1P53264 445 aa1.56□□□□□ -2.16
SNF5YBR289W PXR1P53335 271 aaPredicted RBP1.56□□□□□ -2.16
SNF5YBR289W APC5Q08683 685 aa1.56□□□□□ -2.16
SNF5YBR289W COX10P21592 462 aa1.55□□□□□ -2.16
SNF5YBR289W TIP20P33891 701 aa1.55□□□□□ -2.16
SNF5YBR289W YJR030CP47101 745 aa1.55□□□□□ -2.16
SNF5YBR289W YPT32P51996 222 aaKnown RBP1.55□□□□□ -2.16
SNF5YBR289W PNC1P53184 216 aaKnown RBP1.55□□□□□ -2.16
SNF5YBR289W YMR244WQ04018 355 aa1.55□□□□□ -2.16
SNF5YBR289W PRM6Q04705 352 aa1.55□□□□□ -2.16
SNF5YBR289W HMS1Q12398 434 aa1.55□□□□□ -2.16
SNF5YBR289W RPP0P05317 312 aaKnown RBP1.55□□□□□ -2.16
SNF5YBR289W CDC37P06101 506 aaKnown RBP1.55□□□□□ -2.16
SNF5YBR289W MCH2P36032 473 aa1.55□□□□□ -2.16
SNF5YBR289W ECM8P38246 354 aa1.55□□□□□ -2.16
SNF5YBR289W SHE3P38272 425 aaKnown RBP1.55□□□□□ -2.16
SNF5YBR289W AIP1P46680 615 aaKnown RBP1.55□□□□□ -2.16
SNF5YBR289W PMT4P46971 762 aa1.55□□□□□ -2.16
SNF5YBR289W HST1P53685 503 aa1.55□□□□□ -2.16
SNF5YBR289W TRM112P53738 135 aaPredicted RBP1.55□□□□□ -2.16
SNF5YBR289W PFK27Q12471 397 aaPredicted RBP1.55□□□□□ -2.16
SNF5YBR289W RNR2P09938 399 aaKnown RBP1.54□□□□□ -2.16
SNF5YBR289W FRS2P15625 503 aaKnown RBP1.54□□□□□ -2.16
SNF5YBR289W MEK1P24719 497 aaPredicted RBP1.54□□□□□ -2.16
SNF5YBR289W RAD23P32628 398 aaKnown RBP1.54□□□□□ -2.16
SNF5YBR289W CBF5P33322 483 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
SNF5YBR289W PRY2P36110 329 aa1.54□□□□□ -2.16
SNF5YBR289W YPC1P38298 316 aa1.54□□□□□ -2.16
SNF5YBR289W PEX22P39718 180 aa1.54□□□□□ -2.16
SNF5YBR289W SCC4P40090 624 aa1.54□□□□□ -2.16
SNF5YBR289W MEP1P40260 492 aa1.54□□□□□ -2.16
SNF5YBR289W GDS1P41913 522 aa1.54□□□□□ -2.16
SNF5YBR289W SPO19Q03029 223 aa1.54□□□□□ -2.16
SNF5YBR289W YAL063C-AQ3E791 96 aa1.54□□□□□ -2.16
SNF5YBR289W YAL067W-AQ8TGK6 75 aa1.54□□□□□ -2.16
SNF5YBR289W UBA3Q99344 299 aa1.54□□□□□ -2.16
SNF5YBR289W REV3P14284 1504 aa1.54□□□□□ -2.16
SNF5YBR289W PET18P25362 215 aa1.54□□□□□ -2.16
SNF5YBR289W DEP1P31385 405 aa1.54□□□□□ -2.16
SNF5YBR289W RBG1P39729 369 aa1.54□□□□□ -2.16
SNF5YBR289W SHQ1P40486 507 aaPredicted RBP1.54□□□□□ -2.16
SNF5YBR289W YGL114WP53134 725 aa1.54□□□□□ -2.16
SNF5YBR289W CWC22P53333 577 aaKnown RBP1.54□□□□□ -2.16
SNF5YBR289W LDB17Q12342 491 aa1.54□□□□□ -2.16
SNF5YBR289W PRM4Q12498 284 aa1.54□□□□□ -2.16
SNF5YBR289W SPS100P13130 326 aa1.53□□□□□ -2.16
SNF5YBR289W CDC42P19073 191 aa1.53□□□□□ -2.16
SNF5YBR289W PRR1P28708 518 aa1.53□□□□□ -2.16
SNF5YBR289W EHD3P28817 500 aa1.53□□□□□ -2.16
SNF5YBR289W SOP4P39543 234 aaPredicted RBP1.53□□□□□ -2.16
SNF5YBR289W DSE1P40077 573 aa1.53□□□□□ -2.16
SNF5YBR289W IGD1P43598 195 aa1.53□□□□□ -2.16
SNF5YBR289W YFR018CP43599 363 aa1.53□□□□□ -2.16
SNF5YBR289W RPL21AQ02753 160 aaKnown RBP1.53□□□□□ -2.16
SNF5YBR289W TAZ1Q06510 381 aa1.53□□□□□ -2.16
SNF5YBR289W RDL2Q08742 149 aaKnown RBP1.53□□□□□ -2.16
SNF5YBR289W DDC1Q08949 612 aa1.53□□□□□ -2.16
SNF5YBR289W MDY2Q12285 212 aa1.53□□□□□ -2.16
SNF5YBR289W RPL21BQ12672 160 aaKnown RBP1.53□□□□□ -2.16
SNF5YBR289W YLL053CP0CD98 152 aa1.53□□□□□ -2.16
SNF5YBR289W YNL208WP40159 199 aaKnown RBP1.53□□□□□ -2.16
SNF5YBR289W MOB2P43563 287 aa1.53□□□□□ -2.16
SNF5YBR289W SDS23P53172 527 aa1.53□□□□□ -2.16
SNF5YBR289W ERV41Q04651 352 aa1.53□□□□□ -2.16
SNF5YBR289W RRG8Q06109 277 aa1.53□□□□□ -2.16
SNF5YBR289W TCB3Q03640 1545 aaKnown RBP1.53□□□□□ -2.17
SNF5YBR289W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.53□□□□□ -2.17not detected
SNF5YBR289W VAB2P40003 282 aa1.53□□□□□ -2.17
SNF5YBR289W RPN14P53196 417 aa1.53□□□□□ -2.17
SNF5YBR289W LSB1P53281 241 aa1.53□□□□□ -2.17
SNF5YBR289W SED5Q01590 340 aa1.53□□□□□ -2.17
SNF5YBR289W YPL080CQ02826 108 aa1.53□□□□□ -2.17
SNF5YBR289W VHS1Q03785 461 aa1.53□□□□□ -2.17
SNF5YBR289W YBL111CQ3E7Y5 667 aa1.53□□□□□ -2.17
SNF5YBR289W ATP6P00854 259 aa1.52□□□□□ -2.17
SNF5YBR289W RPL31AP0C2H8 113 aaKnown RBP1.52□□□□□ -2.17
SNF5YBR289W AGA2P32781 87 aa1.52□□□□□ -2.17
SNF5YBR289W MRPL40P36534 297 aa1.52□□□□□ -2.17
SNF5YBR289W MBA1P38300 278 aa1.52□□□□□ -2.17
SNF5YBR289W LIP2Q06005 328 aa1.52□□□□□ -2.17
SNF5YBR289W RPN8Q08723 338 aaKnown RBP1.52□□□□□ -2.17
SNF5YBR289W HPR1P17629 752 aaKnown RBP1.52□□□□□ -2.17
SNF5YBR289W YKL070WP36087 169 aa1.52□□□□□ -2.17
SNF5YBR289W TAE1P38340 232 aa1.52□□□□□ -2.17
SNF5YBR289W PCL7P40186 285 aa1.52□□□□□ -2.17
SNF5YBR289W UTP25P40498 721 aaKnown RBP1.52□□□□□ -2.17
SNF5YBR289W GPI8P49018 411 aa1.52□□□□□ -2.17
SNF5YBR289W UBC13P52490 153 aa1.52□□□□□ -2.17
SNF5YBR289W YGR067CP53243 804 aa1.52□□□□□ -2.17
SNF5YBR289W YNR066CP53752 436 aa1.52□□□□□ -2.17
SNF5YBR289W MRX11Q03079 207 aa1.52□□□□□ -2.17
SNF5YBR289W RVB1Q03940 463 aaKnown RBP1.52□□□□□ -2.17
SNF5YBR289W GTO3Q04806 366 aa1.52□□□□□ -2.17
SNF5YBR289W DIB1Q06819 143 aaPredicted RBP1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms