RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W MTC1P47018 478 aaKnown RBP6.56□□□□□ -1.36
SNF5YBR289W DRS1P32892 752 aaKnown RBP6.44□□□□□ -1.38
SNF5YBR289W FAP1P53971 965 aa6.06□□□□□ -1.44
SNF5YBR289W PRY3P47033 881 aa5.71□□□□□ -1.5
SNF5YBR289W PRI1P10363 409 aa5.61□□□□□ -1.51
SNF5YBR289W AVT3P36062 692 aa5.6□□□□□ -1.51
SNF5YBR289W AAD16Q02895 342 aa5.59□□□□□ -1.52
SNF5YBR289W BFR2Q06631 534 aaKnown RBP5.55□□□□□ -1.52
SNF5YBR289W DIP2Q12220 943 aaPredicted RBP5.51□□□□□ -1.53
SNF5YBR289W ISW2Q08773 1120 aa5.45□□□□□ -1.54
SNF5YBR289W TFA1P36100 482 aa5.42□□□□□ -1.54
SNF5YBR289W RPG1P38249 964 aaKnown RBP5.41□□□□□ -1.54
SNF5YBR289W YCK3P39962 524 aa5.4□□□□□ -1.54
SNF5YBR289W HAA1Q12753 694 aaKnown RBP5.33□□□□□ -1.56
SNF5YBR289W TSR3Q12094 313 aaKnown RBP5.31□□□□□ -1.56
SNF5YBR289W RSE1Q04693 1361 aaKnown RBP5.15□□□□□ -1.59
SNF5YBR289W MRPL32P25348 183 aa5.08□□□□□ -1.6
SNF5YBR289W RPL17AP05740 184 aaKnown RBP5.01□□□□□ -1.61
SNF5YBR289W RPL17BP46990 184 aaKnown RBP5.01□□□□□ -1.61
SNF5YBR289W REB1P21538 810 aa4.99□□□□□ -1.61
SNF5YBR289W SPT21P35209 758 aa4.97□□□□□ -1.61
SNF5YBR289W YGL015CP33199 130 aa4.9□□□□□ -1.62
SNF5YBR289W RIM101P33400 625 aa4.86□□□□□ -1.63
SNF5YBR289W CDC27P38042 758 aa4.82□□□□□ -1.64
SNF5YBR289W YKR023WP36119 530 aaKnown RBP4.79□□□□□ -1.64
SNF5YBR289W OXP1P28273 1286 aa4.76□□□□□ -1.65
SNF5YBR289W MAP2P38174 421 aaKnown RBP4.68□□□□□ -1.66
SNF5YBR289W HOP09932 586 aa4.67□□□□□ -1.66
SNF5YBR289W UBP10P53874 792 aaPredicted RBP4.67□□□□□ -1.66
SNF5YBR289W DCD1P06773 312 aa4.67□□□□□ -1.66
SNF5YBR289W TFC8Q12308 588 aa4.66□□□□□ -1.66
SNF5YBR289W YLR271WQ06152 274 aa4.6□□□□□ -1.67
SNF5YBR289W PTP3P40048 928 aa4.58□□□□□ -1.68
SNF5YBR289W BUD31P25337 157 aaPredicted RBP4.56□□□□□ -1.68
SNF5YBR289W SCY1P53009 804 aa4.56□□□□□ -1.68
SNF5YBR289W SSP1P38871 571 aa4.55□□□□□ -1.68
SNF5YBR289W BCH2P36122 765 aa4.51□□□□□ -1.69
SNF5YBR289W SLX5P32828 619 aaKnown RBP4.5□□□□□ -1.69
SNF5YBR289W PSD2P53037 1138 aaKnown RBP4.48□□□□□ -1.69
SNF5YBR289W CST9Q06032 482 aa4.48□□□□□ -1.69
SNF5YBR289W TIF4632P39936 914 aaKnown RBP4.48□□□□□ -1.69
SNF5YBR289W YAH1Q12184 172 aaKnown RBP4.48□□□□□ -1.69
SNF5YBR289W TGL3P40308 642 aa4.46□□□□□ -1.7
SNF5YBR289W RSM7P47150 247 aa4.45□□□□□ -1.7
SNF5YBR289W DMA1P38823 416 aa4.44□□□□□ -1.7
SNF5YBR289W AI2P03876 854 aa4.4□□□□□ -1.71
SNF5YBR289W MGA2P40578 1113 aa4.39□□□□□ -1.71
SNF5YBR289W YIL055CP40523 627 aaKnown RBP4.39□□□□□ -1.71
SNF5YBR289W BDF1P35817 686 aa4.38□□□□□ -1.71
SNF5YBR289W EPS1P40557 701 aa4.38□□□□□ -1.71
SNF5YBR289W RCR1P38212 213 aa4.37□□□□□ -1.71
SNF5YBR289W UBP9P39967 754 aa4.36□□□□□ -1.71
SNF5YBR289W SIS1P25294 352 aaKnown RBP4.33□□□□□ -1.72
SNF5YBR289W RAM2P29703 316 aa4.31□□□□□ -1.72
SNF5YBR289W SAS10Q12136 610 aaPredicted RBP4.31□□□□□ -1.72
SNF5YBR289W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
SNF5YBR289W MST1P07236 462 aa4.27□□□□□ -1.73
SNF5YBR289W VPS29P38759 282 aa4.27□□□□□ -1.73
SNF5YBR289W BBC1P47068 1157 aa4.26□□□□□ -1.73
SNF5YBR289W MRM1P25270 412 aa4.25□□□□□ -1.73
SNF5YBR289W YOR238WQ08634 303 aa4.24□□□□□ -1.73
SNF5YBR289W RQC2Q12532 1038 aaKnown RBP4.23□□□□□ -1.73
SNF5YBR289W YBL029C-AQ3E756 94 aa4.23□□□□□ -1.73
SNF5YBR289W NSR1P27476 414 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
SNF5YBR289W STS1P38637 319 aa4.2□□□□□ -1.74
SNF5YBR289W YAP5P40574 245 aa4.19□□□□□ -1.74
SNF5YBR289W VNX1P42839 908 aa4.17□□□□□ -1.74
SNF5YBR289W RTG3P38165 486 aa4.17□□□□□ -1.74
SNF5YBR289W YPR148CQ06523 435 aa4.17□□□□□ -1.74
SNF5YBR289W MAK11P20484 414 aaKnown RBP4.15□□□□□ -1.74
SNF5YBR289W EDS1P38073 919 aa4.15□□□□□ -1.74
SNF5YBR289W WSC3Q12215 556 aa4.15□□□□□ -1.75
SNF5YBR289W SET1P38827 1080 aaKnown RBP4.13□□□□□ -1.75
SNF5YBR289W SPP1Q03012 353 aa4.13□□□□□ -1.75
SNF5YBR289W GTT3P39996 337 aa4.1□□□□□ -1.75
SNF5YBR289W PIB1Q06651 286 aa4.1□□□□□ -1.75
SNF5YBR289W COQ8P27697 501 aa4.1□□□□□ -1.75
SNF5YBR289W DBP1P24784 617 aaKnown RBP4.09□□□□□ -1.75
SNF5YBR289W YMR1P47147 688 aaKnown RBP RIP-Chip data4.09□□□□□ -1.75not detected
SNF5YBR289W NST1P53935 1240 aa4.09□□□□□ -1.75
SNF5YBR289W TIF11P38912 153 aaKnown RBP4.08□□□□□ -1.76
SNF5YBR289W YFR006WP43590 535 aa4.08□□□□□ -1.76
SNF5YBR289W LEU3P08638 886 aa4.08□□□□□ -1.76
SNF5YBR289W SOL3P38858 249 aa4.06□□□□□ -1.76
SNF5YBR289W AIR2Q12476 344 aaKnown RBP4.06□□□□□ -1.76
SNF5YBR289W FKH1P40466 484 aa4.05□□□□□ -1.76
SNF5YBR289W VMA1P17255 1071 aaKnown RBP4.03□□□□□ -1.76
SNF5YBR289W PTC3P34221 468 aaKnown RBP4.03□□□□□ -1.76
SNF5YBR289W LEO1P38439 464 aa4.03□□□□□ -1.76
SNF5YBR289W ULI1P43604 169 aa4.03□□□□□ -1.76
SNF5YBR289W YDR090CQ03193 310 aa4.02□□□□□ -1.77
SNF5YBR289W IOC2Q12072 812 aa4.02□□□□□ -1.77
SNF5YBR289W LDB19Q12502 818 aa4.02□□□□□ -1.77
SNF5YBR289W DSF2P38213 736 aa4.02□□□□□ -1.77
SNF5YBR289W NOP53Q12080 455 aaKnown RBP4.02□□□□□ -1.77
SNF5YBR289W YJL171CP46992 396 aa4.01□□□□□ -1.77
SNF5YBR289W VPS70P47161 811 aa4.01□□□□□ -1.77
SNF5YBR289W SAM3Q08986 587 aa4.01□□□□□ -1.77
SNF5YBR289W ABP1P15891 592 aaKnown RBP4.01□□□□□ -1.77
SNF5YBR289W UBP14P38237 781 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms