RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	MED8	P38304	223 aa		5.25	□□□□□ -1.57
GDE1	YPL110C	VTH1	P40438	1549 aa		5.25	□□□□□ -1.57
GDE1	YPL110C	VTH2	P40890	1549 aa		5.25	□□□□□ -1.57
GDE1	YPL110C	ROX1	P25042	368 aa		5.25	□□□□□ -1.57
GDE1	YPL110C	MEH1	Q02205	184 aa		5.25	□□□□□ -1.57
GDE1	YPL110C	OSW7	P43611	510 aa		5.24	□□□□□ -1.57
GDE1	YPL110C	PAN1	P32521	1480 aa		5.24	□□□□□ -1.57
GDE1	YPL110C	DEP1	P31385	405 aa		5.24	□□□□□ -1.57
GDE1	YPL110C	PIM1	P36775	1133 aa		5.24	□□□□□ -1.57
GDE1	YPL110C	TY4A-J	P47023	414 aa		5.24	□□□□□ -1.57
GDE1	YPL110C	SSF1	P38789	453 aa	Predicted RBP	5.23	□□□□□ -1.57
GDE1	YPL110C	YPR172W	Q06608	200 aa		5.23	□□□□□ -1.57
GDE1	YPL110C	CLF1	Q12309	687 aa	Predicted RBP	5.23	□□□□□ -1.57
GDE1	YPL110C	MSM1	P22438	575 aa		5.23	□□□□□ -1.57
GDE1	YPL110C	DSF2	P38213	736 aa		5.23	□□□□□ -1.57
GDE1	YPL110C	DJP1	P40564	432 aa		5.23	□□□□□ -1.57
GDE1	YPL110C	NOP7	P53261	605 aa	Known RBP	5.23	□□□□□ -1.57
GDE1	YPL110C	HEL2	Q05580	639 aa	Known RBP	5.23	□□□□□ -1.57
GDE1	YPL110C	NDL1	Q06568	189 aa		5.23	□□□□□ -1.57
GDE1	YPL110C	RPL5	P26321	297 aa	Known RBP	5.22	□□□□□ -1.57
GDE1	YPL110C	CCM1	P48237	864 aa	Predicted RBP	5.22	□□□□□ -1.57
GDE1	YPL110C	LSP1	Q12230	341 aa	Known RBP	5.22	□□□□□ -1.57
GDE1	YPL110C	CFT1	Q06632	1357 aa	Known RBP	5.22	□□□□□ -1.57
GDE1	YPL110C	NOT3	P06102	836 aa	Known RBP	5.22	□□□□□ -1.57
GDE1	YPL110C	ECM1	P39715	212 aa		5.22	□□□□□ -1.57
GDE1	YPL110C	DSN1	P40568	576 aa		5.22	□□□□□ -1.57
GDE1	YPL110C	TFG1	P41895	735 aa	Predicted RBP	5.22	□□□□□ -1.57
GDE1	YPL110C	IMH1	Q06704	911 aa	Known RBP	5.22	□□□□□ -1.57
GDE1	YPL110C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	not detected
GDE1	YPL110C	TPS3	P38426	1054 aa	Known RBP	5.21	□□□□□ -1.57
GDE1	YPL110C	ZDS1	P50111	915 aa	Known RBP	5.21	□□□□□ -1.57
GDE1	YPL110C	PSR1	Q07800	427 aa		5.21	□□□□□ -1.58
GDE1	YPL110C	KAR3	P17119	729 aa		5.21	□□□□□ -1.58
GDE1	YPL110C	RAD16	P31244	790 aa		5.21	□□□□□ -1.58
GDE1	YPL110C	PXR1	P53335	271 aa	Predicted RBP	5.21	□□□□□ -1.58
GDE1	YPL110C	SLN1	P39928	1220 aa	Predicted RBP	5.2	□□□□□ -1.58
GDE1	YPL110C	PRP43	P53131	767 aa	Known RBP	5.2	□□□□□ -1.58
GDE1	YPL110C	SEN54	Q02825	467 aa	Predicted RBP	5.2	□□□□□ -1.58
GDE1	YPL110C	VPS30	Q02948	557 aa		5.2	□□□□□ -1.58
GDE1	YPL110C	PSK2	Q08217	1101 aa		5.2	□□□□□ -1.58
GDE1	YPL110C	VPS5	Q92331	675 aa		5.2	□□□□□ -1.58
GDE1	YPL110C	SYH1	Q02875	849 aa	Known RBP	5.2	□□□□□ -1.58
GDE1	YPL110C	GUA1	P38625	525 aa	Known RBP	5.19	□□□□□ -1.58
GDE1	YPL110C	HUL5	P53119	910 aa		5.19	□□□□□ -1.58
GDE1	YPL110C	YNR021W	P53723	404 aa	Known RBP	5.19	□□□□□ -1.58
GDE1	YPL110C	RPL17A	P05740	184 aa	Known RBP	5.19	□□□□□ -1.58
GDE1	YPL110C	ARO1	P08566	1588 aa	Known RBP	5.19	□□□□□ -1.58
GDE1	YPL110C	SEC27	P41811	889 aa	Known RBP	5.19	□□□□□ -1.58
GDE1	YPL110C	RPL17B	P46990	184 aa	Known RBP	5.19	□□□□□ -1.58
GDE1	YPL110C	PDR1	P12383	1068 aa		5.19	□□□□□ -1.58
GDE1	YPL110C	SPB4	P25808	606 aa	Predicted RBP	5.19	□□□□□ -1.58
GDE1	YPL110C	YRF1-2	P40105	1681 aa		5.19	□□□□□ -1.58
GDE1	YPL110C	SAC3	P46674	1301 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	TRM3	Q07527	1436 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	SWI6	P09959	803 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	YNL050C	P53952	270 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	DNF2	Q12675	1612 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	SSM4	P40318	1319 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	MGA2	P40578	1113 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	IAH1	P41734	238 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	IKI3	Q06706	1349 aa	Known RBP	5.18	□□□□□ -1.58
GDE1	YPL110C	TAF2	P23255	1407 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	RAD3	P06839	778 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	KEX2	P13134	814 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	PSO2	P30620	661 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	VTC3	Q02725	835 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	PKH1	Q03407	766 aa		5.18	□□□□□ -1.58
GDE1	YPL110C	YEF3	P16521	1044 aa	Known RBP	5.17	□□□□□ -1.58
GDE1	YPL110C	RPC31	P17890	251 aa		5.17	□□□□□ -1.58
GDE1	YPL110C	RRN6	P32786	894 aa		5.17	□□□□□ -1.58
GDE1	YPL110C	POL5	P39985	1022 aa	Known RBP	5.17	□□□□□ -1.58
GDE1	YPL110C	TAF1	P46677	1066 aa		5.17	□□□□□ -1.58
GDE1	YPL110C	ARR1	Q06596	294 aa		5.17	□□□□□ -1.58
GDE1	YPL110C	AIM7	Q12156	149 aa		5.17	□□□□□ -1.58
GDE1	YPL110C	YOL087C	Q99247	1116 aa		5.17	□□□□□ -1.58
GDE1	YPL110C	THR4	P16120	514 aa	Known RBP	5.17	□□□□□ -1.58
GDE1	YPL110C	PUS1	Q12211	544 aa	Known RBP	5.17	□□□□□ -1.58
GDE1	YPL110C	GAL11	P19659	1081 aa		5.16	□□□□□ -1.58
GDE1	YPL110C	CIN4	P39110	191 aa		5.16	□□□□□ -1.58
GDE1	YPL110C	YNL247W	P53852	767 aa	Known RBP	5.16	□□□□□ -1.58
GDE1	YPL110C	RRB1	Q04225	511 aa	Known RBP	5.16	□□□□□ -1.58
GDE1	YPL110C	KEL2	P50090	882 aa		5.16	□□□□□ -1.58
GDE1	YPL110C	SGT2	Q12118	346 aa	Known RBP	5.16	□□□□□ -1.58
GDE1	YPL110C	NOP14	Q99207	810 aa	Known RBP	5.16	□□□□□ -1.58
GDE1	YPL110C	TSC11	P40061	1430 aa		5.16	□□□□□ -1.58
GDE1	YPL110C	GYP7	P48365	746 aa		5.16	□□□□□ -1.58
GDE1	YPL110C	RIA1	P53893	1110 aa		5.16	□□□□□ -1.58
GDE1	YPL110C	CST9	Q06032	482 aa		5.16	□□□□□ -1.58
GDE1	YPL110C	BRE1	Q07457	700 aa	Known RBP	5.16	□□□□□ -1.58
GDE1	YPL110C	PCL8	Q08966	492 aa		5.16	□□□□□ -1.58
GDE1	YPL110C	GEA2	P39993	1459 aa	Known RBP	5.15	□□□□□ -1.58
GDE1	YPL110C	PHO87	P25360	923 aa		5.15	□□□□□ -1.58
GDE1	YPL110C	KDX1	P36005	433 aa		5.15	□□□□□ -1.58
GDE1	YPL110C	YKR023W	P36119	530 aa	Known RBP	5.15	□□□□□ -1.58
GDE1	YPL110C	GDE1	Q02979	1223 aa		5.15	□□□□□ -1.58
GDE1	YPL110C	GLE1	Q12315	538 aa		5.15	□□□□□ -1.58
GDE1	YPL110C	JJJ1	P53863	590 aa		5.15	□□□□□ -1.59
GDE1	YPL110C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
GDE1	YPL110C	MET10	P39692	1035 aa		5.15	□□□□□ -1.59
GDE1	YPL110C	HST2	P53686	357 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms