RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C MAK21Q12176 1025 aaKnown RBP6.42□□□□□ -1.38
RAT1YOR048C RAD24P32641 659 aa6.42□□□□□ -1.38
RAT1YOR048C RTF1P53064 558 aa6.42□□□□□ -1.38
RAT1YOR048C SLA1P32790 1244 aa6.41□□□□□ -1.38
RAT1YOR048C RSC1P53236 928 aa6.41□□□□□ -1.38
RAT1YOR048C BMS1Q08965 1183 aaKnown RBP6.41□□□□□ -1.38
RAT1YOR048C COQ4O13525 335 aa6.4□□□□□ -1.38
RAT1YOR048C ZDS1P50111 915 aaKnown RBP6.4□□□□□ -1.38
RAT1YOR048C PSK1P31374 1356 aa6.4□□□□□ -1.38
RAT1YOR048C BUD27P43573 796 aaKnown RBP RIP-Chip data6.4□□□□□ -1.39not detected
RAT1YOR048C SSL2Q00578 843 aa6.4□□□□□ -1.39
RAT1YOR048C GYP7P48365 746 aa6.39□□□□□ -1.39
RAT1YOR048C YNR029CP53729 429 aaKnown RBP6.39□□□□□ -1.39
RAT1YOR048C CTI6Q08923 506 aa6.39□□□□□ -1.39
RAT1YOR048C DID4P36108 232 aa6.39□□□□□ -1.39
RAT1YOR048C BDP1P46678 594 aa6.39□□□□□ -1.39
RAT1YOR048C MTR4P47047 1073 aaKnown RBP6.39□□□□□ -1.39
RAT1YOR048C KRI1P42846 591 aaKnown RBP6.39□□□□□ -1.39
RAT1YOR048C NUP145P49687 1317 aa6.38□□□□□ -1.39
RAT1YOR048C TFC8Q12308 588 aa6.38□□□□□ -1.39
RAT1YOR048C MCM2P29469 868 aa6.38□□□□□ -1.39
RAT1YOR048C APC1P53886 1748 aa6.37□□□□□ -1.39
RAT1YOR048C SCT1P32784 759 aa6.37□□□□□ -1.39
RAT1YOR048C NTH2P35172 780 aa6.37□□□□□ -1.39
RAT1YOR048C GCR2Q01722 534 aa6.37□□□□□ -1.39
RAT1YOR048C APC11Q12157 165 aa6.37□□□□□ -1.39
RAT1YOR048C VAS1P07806 1104 aaKnown RBP6.36□□□□□ -1.39
RAT1YOR048C GRX4P32642 244 aa6.36□□□□□ -1.39
RAT1YOR048C VMS1Q04311 632 aaKnown RBP6.36□□□□□ -1.39
RAT1YOR048C RAD50P12753 1312 aa6.36□□□□□ -1.39
RAT1YOR048C MFT1P33441 392 aaKnown RBP6.36□□□□□ -1.39
RAT1YOR048C TRL1P09880 827 aaKnown RBP6.35□□□□□ -1.39
RAT1YOR048C HXT10P43581 546 aa6.35□□□□□ -1.39
RAT1YOR048C YRF1-4O13559 1382 aa6.35□□□□□ -1.39
RAT1YOR048C TSR3Q12094 313 aaKnown RBP6.34□□□□□ -1.39
RAT1YOR048C RPO41P13433 1351 aaKnown RBP6.34□□□□□ -1.39
RAT1YOR048C RVS167P39743 482 aaKnown RBP6.34□□□□□ -1.39
RAT1YOR048C CIR1P42940 261 aa6.34□□□□□ -1.39
RAT1YOR048C TCB2P48231 1178 aa6.34□□□□□ -1.39
RAT1YOR048C NOT3P06102 836 aaKnown RBP6.33□□□□□ -1.4
RAT1YOR048C RAD4P14736 754 aa6.33□□□□□ -1.4
RAT1YOR048C RKM3P38222 552 aa6.33□□□□□ -1.4
RAT1YOR048C YNL050CP53952 270 aa6.33□□□□□ -1.4
RAT1YOR048C USO1P25386 1790 aa6.33□□□□□ -1.4
RAT1YOR048C TY1B-NL2Q99337 1749 aaKnown RBP6.33□□□□□ -1.4
RAT1YOR048C MAK10Q02197 733 aa6.33□□□□□ -1.4
RAT1YOR048C MNR2P35724 969 aa6.33□□□□□ -1.4
RAT1YOR048C LCD1Q04377 747 aa6.33□□□□□ -1.4
RAT1YOR048C EDE1P34216 1381 aa6.32□□□□□ -1.4
RAT1YOR048C DNF3Q12674 1656 aa6.32□□□□□ -1.4
RAT1YOR048C PIB2P53191 635 aa6.32□□□□□ -1.4
RAT1YOR048C ALE1Q08548 619 aa6.32□□□□□ -1.4
RAT1YOR048C NOP8Q08287 484 aaPredicted RBP6.32□□□□□ -1.4
RAT1YOR048C PGA3Q12746 312 aaKnown RBP6.32□□□□□ -1.4
RAT1YOR048C TRS33Q99394 268 aa6.32□□□□□ -1.4
RAT1YOR048C SIR4P11978 1358 aa6.32□□□□□ -1.4
RAT1YOR048C MBR1P23493 339 aa6.31□□□□□ -1.4
RAT1YOR048C HRQ1Q05549 1077 aa6.31□□□□□ -1.4
RAT1YOR048C LSP1Q12230 341 aaKnown RBP6.31□□□□□ -1.4
RAT1YOR048C YIL177CP40434 1758 aa6.31□□□□□ -1.4
RAT1YOR048C YJL225CP40889 1758 aa6.31□□□□□ -1.4
RAT1YOR048C NUP133P36161 1157 aa6.31□□□□□ -1.4
RAT1YOR048C VID28P40547 921 aa6.3□□□□□ -1.4
RAT1YOR048C RPS19AP07280 144 aaKnown RBP6.3□□□□□ -1.4
RAT1YOR048C RPS19BP07281 144 aaPredicted RBP6.3□□□□□ -1.4
RAT1YOR048C MSB3P48566 633 aaPredicted RBP6.3□□□□□ -1.4
RAT1YOR048C BIK1P11709 440 aa6.29□□□□□ -1.4
RAT1YOR048C VPS64Q03944 604 aa6.29□□□□□ -1.4
RAT1YOR048C AIM44Q99299 758 aa6.29□□□□□ -1.4
RAT1YOR048C RRP5Q05022 1729 aaKnown RBP6.29□□□□□ -1.4
RAT1YOR048C PRP45P28004 379 aaPredicted RBP6.29□□□□□ -1.4
RAT1YOR048C RPN12P32496 274 aa6.29□□□□□ -1.4
RAT1YOR048C CWH41P53008 833 aa6.29□□□□□ -1.4
RAT1YOR048C TIM50Q02776 476 aa6.29□□□□□ -1.4
RAT1YOR048C ISW2Q08773 1120 aa6.29□□□□□ -1.4
RAT1YOR048C ROM2P51862 1356 aaKnown RBP6.28□□□□□ -1.4
RAT1YOR048C HAP5Q02516 242 aa6.28□□□□□ -1.4
RAT1YOR048C COG8Q04632 607 aa6.28□□□□□ -1.4
RAT1YOR048C SES1P07284 462 aaKnown RBP6.28□□□□□ -1.4
RAT1YOR048C MRP7P12687 371 aa6.28□□□□□ -1.4
RAT1YOR048C AOS1Q06624 347 aa6.28□□□□□ -1.4
RAT1YOR048C FRS2P15625 503 aaKnown RBP6.27□□□□□ -1.41
RAT1YOR048C MIC60P36112 540 aa6.27□□□□□ -1.41
RAT1YOR048C BOI2P39969 1040 aa6.27□□□□□ -1.41
RAT1YOR048C FCP1Q03254 732 aa6.27□□□□□ -1.41
RAT1YOR048C ADE6P38972 1358 aaKnown RBP6.27□□□□□ -1.41
RAT1YOR048C KTR3P38130 404 aaPredicted RBP6.27□□□□□ -1.41
RAT1YOR048C MRPS35P53292 345 aa6.27□□□□□ -1.41
RAT1YOR048C FPR4Q06205 392 aaPredicted RBP6.27□□□□□ -1.41
RAT1YOR048C RIM20Q12033 661 aa6.27□□□□□ -1.41
RAT1YOR048C APL2P36000 726 aaPredicted RBP6.26□□□□□ -1.41
RAT1YOR048C AI2P03876 854 aa6.26□□□□□ -1.41
RAT1YOR048C FYV10P40492 516 aa6.26□□□□□ -1.41
RAT1YOR048C CTF18P49956 741 aa6.26□□□□□ -1.41
RAT1YOR048C RCR1P38212 213 aa6.25□□□□□ -1.41
RAT1YOR048C MAM1P40065 302 aa6.25□□□□□ -1.41
RAT1YOR048C SPB4P25808 606 aaPredicted RBP6.25□□□□□ -1.41
RAT1YOR048C MIF2P35201 549 aa6.25□□□□□ -1.41
RAT1YOR048C AAP1P37898 856 aaKnown RBP6.25□□□□□ -1.41
RAT1YOR048C RAD26P40352 1085 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms