RNA–Protein interactions for RNA: YGR161C-D

YGR161C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR161C-D, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR161C-DYGR161C-D SSM4P40318 1319 aa3.08□□□□□ -1.92
YGR161C-DYGR161C-D SNU71P53207 620 aaKnown RBP3.08□□□□□ -1.92
YGR161C-DYGR161C-D LSB1P53281 241 aa3.08□□□□□ -1.92
YGR161C-DYGR161C-D MNR2P35724 969 aa3.08□□□□□ -1.92
YGR161C-DYGR161C-D MPP10P47083 593 aaKnown RBP3.08□□□□□ -1.92
YGR161C-DYGR161C-D CEX1Q12453 761 aa3.08□□□□□ -1.92
YGR161C-DYGR161C-D BUD3P25558 1636 aa3.08□□□□□ -1.92
YGR161C-DYGR161C-D BDP1P46678 594 aa3.08□□□□□ -1.92
YGR161C-DYGR161C-D CSM3Q04659 317 aa3.08□□□□□ -1.92
YGR161C-DYGR161C-D REV3P14284 1504 aa3.08□□□□□ -1.92
YGR161C-DYGR161C-D MDS3P53094 1487 aa3.08□□□□□ -1.92
YGR161C-DYGR161C-D PSE1P32337 1089 aaKnown RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D YBL086CP38177 466 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D NOP2P40991 618 aaKnown RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D EAF7P53911 425 aaKnown RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D MNL2Q12205 849 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D CLF1Q12309 687 aaPredicted RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D ITC1P53125 1264 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D MET7Q08645 548 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D TY3A-GQ12173 290 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D TY3A-IQ99219 290 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D LPD1P09624 499 aaKnown RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D MUM2P38236 366 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D PPX1P38698 397 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D IMP4P53941 290 aaKnown RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D GIR2Q03768 265 aaPredicted RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D UFD4P33202 1483 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D PDR11P40550 1411 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D GEA1P47102 1408 aaPredicted RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D MAK16P10962 306 aaPredicted RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D BUD14P27637 709 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D AFG2P32794 780 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D AAP1P37898 856 aaKnown RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D TOM71P38825 639 aaKnown RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D VPS64Q03944 604 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D BRR1Q99177 341 aaPredicted RBP3.07□□□□□ -1.92
YGR161C-DYGR161C-D SCC2Q04002 1493 aa3.07□□□□□ -1.92
YGR161C-DYGR161C-D EBP2P36049 427 aaKnown RBP3.06□□□□□ -1.92
YGR161C-DYGR161C-D FMO1P38866 432 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D ARP7Q12406 477 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D SPP41P38904 1435 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D YOR1P53049 1477 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D YPK9Q12697 1472 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D BUB1P41695 1021 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
YGR161C-DYGR161C-D RRG1Q12167 365 aaPredicted RBP3.06□□□□□ -1.92
YGR161C-DYGR161C-D YLL058WQ12198 575 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D SRB8P25648 1427 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D SSA4P22202 642 aaKnown RBP3.06□□□□□ -1.92
YGR161C-DYGR161C-D SET1P38827 1080 aaKnown RBP3.06□□□□□ -1.92
YGR161C-DYGR161C-D RSM25P40496 264 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D UTP22P53254 1237 aaPredicted RBP3.06□□□□□ -1.92
YGR161C-DYGR161C-D COP1P53622 1201 aaKnown RBP3.06□□□□□ -1.92
YGR161C-DYGR161C-D YLH47Q06493 454 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D SRS2P12954 1174 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D AFT1P22149 690 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D SPR3P41901 512 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D PUF6Q04373 656 aaKnown RBP3.06□□□□□ -1.92
YGR161C-DYGR161C-D PAH1P32567 862 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D IPL1P38991 367 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D FKH1P40466 484 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D SHQ1P40486 507 aaPredicted RBP3.06□□□□□ -1.92
YGR161C-DYGR161C-D SIZ1Q04195 904 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D OSH2Q12451 1283 aa3.06□□□□□ -1.92
YGR161C-DYGR161C-D ROM2P51862 1356 aaKnown RBP3.05□□□□□ -1.92
YGR161C-DYGR161C-D FUS1P11710 512 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D GUA1P38625 525 aaKnown RBP3.05□□□□□ -1.92
YGR161C-DYGR161C-D CWC21Q03375 135 aaKnown RBP3.05□□□□□ -1.92
YGR161C-DYGR161C-D ETT1Q08421 412 aaKnown RBP3.05□□□□□ -1.92
YGR161C-DYGR161C-D SSK2P53599 1579 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D KCC4P25389 1037 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D UGA3P26370 528 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D NMD2P38798 1089 aaKnown RBP3.05□□□□□ -1.92
YGR161C-DYGR161C-D EPS1P40557 701 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D PEX14P53112 341 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D YNL050CP53952 270 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D SGD1Q06132 899 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D IRE1P32361 1115 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D LDH1P38139 375 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D VHR2P40041 505 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D XKS1P42826 600 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D ACF4P47129 309 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D ARP5P53946 755 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D RKM4Q12504 494 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D PDR10P51533 1564 aa3.05□□□□□ -1.92
YGR161C-DYGR161C-D RTR1P40084 226 aaPredicted RBP3.05□□□□□ -1.92
YGR161C-DYGR161C-D PUS4P48567 403 aaKnown RBP3.05□□□□□ -1.92
YGR161C-DYGR161C-D YCF1P39109 1515 aaKnown RBP3.04□□□□□ -1.92
YGR161C-DYGR161C-D YKU70P32807 602 aa3.04□□□□□ -1.92
YGR161C-DYGR161C-D WHI3P34761 661 aaKnown RBP3.04□□□□□ -1.92
YGR161C-DYGR161C-D PEX5P35056 612 aa3.04□□□□□ -1.92
YGR161C-DYGR161C-D HXT5P38695 592 aa3.04□□□□□ -1.92
YGR161C-DYGR161C-D YNR029CP53729 429 aaKnown RBP3.04□□□□□ -1.92
YGR161C-DYGR161C-D NST1P53935 1240 aa3.04□□□□□ -1.92
YGR161C-DYGR161C-D VPS15P22219 1454 aa3.04□□□□□ -1.92
YGR161C-DYGR161C-D SIN3P22579 1536 aa3.04□□□□□ -1.92
YGR161C-DYGR161C-D BRN1P38170 754 aa3.04□□□□□ -1.92
YGR161C-DYGR161C-D CLB3P24870 427 aa3.04□□□□□ -1.92
YGR161C-DYGR161C-D MDL2P33311 773 aa3.04□□□□□ -1.92
YGR161C-DYGR161C-D MAM1P40065 302 aa3.04□□□□□ -1.92
YGR161C-DYGR161C-D YJR107WP47145 328 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms