RNA–Protein interactions for RNA: YBR215W

HPC2, Transcript of Subunit of the HIR complex, yeastyeast

Gene HPC2, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPC2YBR215W GPI8P49018 411 aa5.73□□□□□ -1.49
HPC2YBR215W YNL058CP53947 316 aa5.73□□□□□ -1.49
HPC2YBR215W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
HPC2YBR215W TIF1P10081 395 aaKnown RBP5.73□□□□□ -1.49
HPC2YBR215W RTG2P32608 588 aaKnown RBP5.73□□□□□ -1.49
HPC2YBR215W YKL091CP33324 310 aaKnown RBP5.73□□□□□ -1.49
HPC2YBR215W ITC1P53125 1264 aa5.73□□□□□ -1.49
HPC2YBR215W PRP3Q03338 469 aaPredicted RBP5.73□□□□□ -1.49
HPC2YBR215W MTC5Q03897 1148 aa5.73□□□□□ -1.49
HPC2YBR215W BRF1P29056 596 aa5.72□□□□□ -1.49
HPC2YBR215W UBP12P39538 1254 aa5.72□□□□□ -1.49
HPC2YBR215W SRP1Q02821 542 aaKnown RBP5.72□□□□□ -1.49
HPC2YBR215W YML083CQ04526 418 aa5.72□□□□□ -1.49
HPC2YBR215W TFC3P34111 1160 aa5.71□□□□□ -1.5
HPC2YBR215W VHR2P40041 505 aa5.71□□□□□ -1.5
HPC2YBR215W PHM6Q05637 104 aa5.71□□□□□ -1.5
HPC2YBR215W STE5P32917 917 aa5.71□□□□□ -1.5
HPC2YBR215W HXT5P38695 592 aa5.71□□□□□ -1.5
HPC2YBR215W BUD6P41697 788 aa5.71□□□□□ -1.5
HPC2YBR215W YJR142WP47173 342 aa5.71□□□□□ -1.5
HPC2YBR215W ATF2P53296 535 aa5.71□□□□□ -1.5
HPC2YBR215W CDC45Q08032 650 aa5.71□□□□□ -1.5
HPC2YBR215W CEX1Q12453 761 aa5.71□□□□□ -1.5
HPC2YBR215W DPS1P04802 557 aaKnown RBP5.7□□□□□ -1.5
HPC2YBR215W VAC8P39968 578 aa5.7□□□□□ -1.5
HPC2YBR215W POL32P47110 350 aa5.7□□□□□ -1.5
HPC2YBR215W ATG1P53104 897 aa5.7□□□□□ -1.5
HPC2YBR215W RPN4Q03465 531 aa5.7□□□□□ -1.5
HPC2YBR215W MSC6Q08818 692 aaKnown RBP5.7□□□□□ -1.5
HPC2YBR215W NOP58Q12499 511 aaKnown RBP5.7□□□□□ -1.5
HPC2YBR215W FOB1O13329 566 aa5.69□□□□□ -1.5
HPC2YBR215W DPB3P27344 201 aa5.69□□□□□ -1.5
HPC2YBR215W FUN12P39730 1002 aaKnown RBP5.69□□□□□ -1.5
HPC2YBR215W PIL1P53252 339 aaKnown RBP5.69□□□□□ -1.5
HPC2YBR215W YNL011CP53980 444 aa5.69□□□□□ -1.5
HPC2YBR215W RSC2Q06488 889 aa5.69□□□□□ -1.5
HPC2YBR215W IRC3Q06683 689 aa5.69□□□□□ -1.5
HPC2YBR215W SGT2Q12118 346 aaKnown RBP5.69□□□□□ -1.5
HPC2YBR215W YGR161W-CQ3E744 92 aa5.69□□□□□ -1.5
HPC2YBR215W SIT4P20604 311 aa5.68□□□□□ -1.5
HPC2YBR215W PUP1P25043 261 aa5.68□□□□□ -1.5
HPC2YBR215W MRF1P30775 413 aaPredicted RBP5.68□□□□□ -1.5
HPC2YBR215W SEC8P32855 1065 aa5.68□□□□□ -1.5
HPC2YBR215W YHR218WP38899 603 aa5.68□□□□□ -1.5
HPC2YBR215W RRP9Q06506 573 aaKnown RBP5.68□□□□□ -1.5
HPC2YBR215W MPH3P0CE00 602 aa5.68□□□□□ -1.5
HPC2YBR215W YDJ1P25491 409 aaKnown RBP5.68□□□□□ -1.5
HPC2YBR215W MNN1P39106 762 aa5.68□□□□□ -1.5
HPC2YBR215W YEN1P40028 759 aa5.68□□□□□ -1.5
HPC2YBR215W YGR021WP53212 290 aa5.68□□□□□ -1.5
HPC2YBR215W BNI5P53890 448 aaKnown RBP5.68□□□□□ -1.5
HPC2YBR215W ALD3P54114 506 aa5.68□□□□□ -1.5
HPC2YBR215W PUF6Q04373 656 aaKnown RBP5.68□□□□□ -1.5
HPC2YBR215W YPR172WQ06608 200 aa5.68□□□□□ -1.5
HPC2YBR215W RIX7Q07844 837 aaKnown RBP5.68□□□□□ -1.5
HPC2YBR215W STB3Q12427 513 aa5.68□□□□□ -1.5
HPC2YBR215W VID27P40157 782 aa5.67□□□□□ -1.5
HPC2YBR215W RPL34BP40525 121 aaKnown RBP5.67□□□□□ -1.5
HPC2YBR215W MSH4P40965 878 aaPredicted RBP5.67□□□□□ -1.5
HPC2YBR215W LEM3P42838 414 aa5.67□□□□□ -1.5
HPC2YBR215W NST1P53935 1240 aa5.67□□□□□ -1.5
HPC2YBR215W GRC3Q07845 632 aa5.67□□□□□ -1.5
HPC2YBR215W YOR378WQ08902 515 aa5.67□□□□□ -1.5
HPC2YBR215W YPR204WQ08995 1032 aa5.67□□□□□ -1.5
HPC2YBR215W NPL4P33755 580 aa5.66□□□□□ -1.5
HPC2YBR215W PIM1P36775 1133 aa5.66□□□□□ -1.5
HPC2YBR215W RKM3P38222 552 aa5.66□□□□□ -1.5
HPC2YBR215W RSM7P47150 247 aa5.66□□□□□ -1.5
HPC2YBR215W TIM11P81449 96 aaPredicted RBP5.66□□□□□ -1.5
HPC2YBR215W SXM1Q04175 944 aaKnown RBP5.66□□□□□ -1.5
HPC2YBR215W YBL113CQ7M4S9 792 aa5.66□□□□□ -1.5
HPC2YBR215W MPH2P0CD99 609 aa5.66□□□□□ -1.5
HPC2YBR215W FOL1P53848 824 aa5.66□□□□□ -1.5
HPC2YBR215W ATG16Q03818 150 aa5.66□□□□□ -1.5
HPC2YBR215W VTI1Q04338 217 aa5.66□□□□□ -1.5
HPC2YBR215W DBP10Q12389 995 aaKnown RBP5.66□□□□□ -1.5
HPC2YBR215W CHD1P32657 1468 aa5.65□□□□□ -1.5
HPC2YBR215W RAD27P26793 382 aa5.65□□□□□ -1.5
HPC2YBR215W SAS3P34218 831 aa5.65□□□□□ -1.5
HPC2YBR215W NPR3P38742 1146 aa5.65□□□□□ -1.5
HPC2YBR215W HSE1P38753 452 aa5.65□□□□□ -1.5
HPC2YBR215W TIM54P47045 478 aa5.65□□□□□ -1.5
HPC2YBR215W PEX8P53248 589 aa5.65□□□□□ -1.5
HPC2YBR215W ELA1P53861 379 aaPredicted RBP5.65□□□□□ -1.5
HPC2YBR215W VMS1Q04311 632 aaKnown RBP5.65□□□□□ -1.5
HPC2YBR215W PSR1Q07800 427 aa5.65□□□□□ -1.5
HPC2YBR215W CMP2P14747 604 aa5.64□□□□□ -1.51
HPC2YBR215W MSM1P22438 575 aa5.64□□□□□ -1.51
HPC2YBR215W ANP1P32629 500 aa5.64□□□□□ -1.51
HPC2YBR215W ERP5P38819 212 aa5.64□□□□□ -1.51
HPC2YBR215W DAK2P43550 591 aa5.64□□□□□ -1.51
HPC2YBR215W ESF1Q06344 628 aaKnown RBP5.64□□□□□ -1.51
HPC2YBR215W APC5Q08683 685 aa5.64□□□□□ -1.51
HPC2YBR215W ABZ1P37254 787 aaPredicted RBP5.64□□□□□ -1.51
HPC2YBR215W PBP2P38151 413 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
HPC2YBR215W VPS29P38759 282 aa5.64□□□□□ -1.51
HPC2YBR215W IES5P40060 125 aa5.64□□□□□ -1.51
HPC2YBR215W VTC3Q02725 835 aa5.64□□□□□ -1.51
HPC2YBR215W KAR5Q04746 504 aa5.64□□□□□ -1.51
HPC2YBR215W RRI2Q12348 645 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms