RNA–Protein interactions for RNA: YBR215W

HPC2, Transcript of Subunit of the HIR complex, yeastyeast

Gene HPC2, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPC2YBR215W RQC2Q12532 1038 aaKnown RBP8.7□□□□□ -1.02
HPC2YBR215W DRS1P32892 752 aaKnown RBP8.62□□□□□ -1.03
HPC2YBR215W TFA1P36100 482 aa8.43□□□□□ -1.06
HPC2YBR215W TAF7Q05021 590 aa8.4□□□□□ -1.07
HPC2YBR215W BFR2Q06631 534 aaKnown RBP7.99□□□□□ -1.13
HPC2YBR215W FAP1P53971 965 aa7.98□□□□□ -1.13
HPC2YBR215W MTC1P47018 478 aaKnown RBP7.58□□□□□ -1.2
HPC2YBR215W PRY3P47033 881 aa7.55□□□□□ -1.2
HPC2YBR215W LEO1P38439 464 aa7.47□□□□□ -1.21
HPC2YBR215W URN1Q06525 465 aaKnown RBP7.46□□□□□ -1.22
HPC2YBR215W DMA1P38823 416 aa7.44□□□□□ -1.22
HPC2YBR215W AVT3P36062 692 aa7.22□□□□□ -1.25
HPC2YBR215W NAP1P25293 417 aaKnown RBP7.19□□□□□ -1.26
HPC2YBR215W IOC4Q04213 475 aa7.16□□□□□ -1.26
HPC2YBR215W HAA1Q12753 694 aaKnown RBP7.08□□□□□ -1.28
HPC2YBR215W AIM44Q99299 758 aa7.04□□□□□ -1.28
HPC2YBR215W IFH1P39520 1085 aa7.03□□□□□ -1.28
HPC2YBR215W YRB30P53107 440 aaPredicted RBP6.98□□□□□ -1.29
HPC2YBR215W AAD16Q02895 342 aa6.94□□□□□ -1.3
HPC2YBR215W YCK3P39962 524 aa6.93□□□□□ -1.3
HPC2YBR215W DIP2Q12220 943 aaPredicted RBP6.92□□□□□ -1.3
HPC2YBR215W ORC1P54784 914 aaPredicted RBP6.9□□□□□ -1.31
HPC2YBR215W LEU3P08638 886 aa6.89□□□□□ -1.31
HPC2YBR215W ABP1P15891 592 aaKnown RBP6.85□□□□□ -1.31
HPC2YBR215W DMA2P53924 522 aa6.85□□□□□ -1.31
HPC2YBR215W SIS2P36024 562 aa6.81□□□□□ -1.32
HPC2YBR215W YFR016CP43597 1233 aaKnown RBP6.78□□□□□ -1.32
HPC2YBR215W TOP1P04786 769 aa6.77□□□□□ -1.33
HPC2YBR215W SNU71P53207 620 aaKnown RBP6.77□□□□□ -1.33
HPC2YBR215W PRI1P10363 409 aa6.76□□□□□ -1.33
HPC2YBR215W RLF2Q12495 606 aa6.73□□□□□ -1.33
HPC2YBR215W KRI1P42846 591 aaKnown RBP6.71□□□□□ -1.34
HPC2YBR215W SAS10Q12136 610 aaPredicted RBP6.66□□□□□ -1.34
HPC2YBR215W RPS0BP46654 252 aaKnown RBP6.58□□□□□ -1.36
HPC2YBR215W MNN4P36044 1178 aa6.56□□□□□ -1.36
HPC2YBR215W RPN1P38764 993 aaKnown RBP6.56□□□□□ -1.36
HPC2YBR215W EBP2P36049 427 aaKnown RBP6.56□□□□□ -1.36
HPC2YBR215W BRL1P38770 471 aa6.54□□□□□ -1.36
HPC2YBR215W PTP3P40048 928 aa6.54□□□□□ -1.36
HPC2YBR215W MDG1P53885 366 aa6.53□□□□□ -1.36
HPC2YBR215W SWE1P32944 819 aa6.51□□□□□ -1.37
HPC2YBR215W YML020WQ03722 664 aa6.51□□□□□ -1.37
HPC2YBR215W ATG36P46983 293 aa6.49□□□□□ -1.37
HPC2YBR215W NOP8Q08287 484 aaPredicted RBP6.48□□□□□ -1.37
HPC2YBR215W GIN4Q12263 1142 aa6.48□□□□□ -1.37
HPC2YBR215W NUG1P40010 520 aaKnown RBP6.47□□□□□ -1.37
HPC2YBR215W CWC22P53333 577 aaKnown RBP6.46□□□□□ -1.38
HPC2YBR215W CAB3P36076 571 aa6.44□□□□□ -1.38
HPC2YBR215W CKB1P43639 278 aa6.41□□□□□ -1.38
HPC2YBR215W TPO2P53283 614 aa6.4□□□□□ -1.39
HPC2YBR215W SUB1P54000 292 aaKnown RBP6.4□□□□□ -1.39
HPC2YBR215W VPS72Q03388 795 aa6.4□□□□□ -1.39
HPC2YBR215W LAM6Q08001 693 aa6.4□□□□□ -1.39
HPC2YBR215W ASF1P32447 279 aa6.36□□□□□ -1.39
HPC2YBR215W BUD31P25337 157 aaPredicted RBP6.36□□□□□ -1.39
HPC2YBR215W NOP7P53261 605 aaKnown RBP6.36□□□□□ -1.39
HPC2YBR215W RTS3P53289 263 aa6.35□□□□□ -1.39
HPC2YBR215W RLP24Q07915 199 aaKnown RBP6.35□□□□□ -1.39
HPC2YBR215W SLX8P40072 274 aa6.34□□□□□ -1.39
HPC2YBR215W FAR11P53917 953 aa6.34□□□□□ -1.39
HPC2YBR215W TOA1P32773 286 aa6.34□□□□□ -1.39
HPC2YBR215W BRN1P38170 754 aa6.32□□□□□ -1.4
HPC2YBR215W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
HPC2YBR215W OSW7P43611 510 aa6.31□□□□□ -1.4
HPC2YBR215W HIF1Q12373 385 aa6.31□□□□□ -1.4
HPC2YBR215W YGL015CP33199 130 aa6.3□□□□□ -1.4
HPC2YBR215W SPC42P36094 363 aa6.3□□□□□ -1.4
HPC2YBR215W YJR008WP47085 338 aa6.28□□□□□ -1.4
HPC2YBR215W BUD21Q08492 214 aaPredicted RBP6.28□□□□□ -1.4
HPC2YBR215W TSR3Q12094 313 aaKnown RBP6.28□□□□□ -1.4
HPC2YBR215W PSH1Q12161 406 aa6.28□□□□□ -1.4
HPC2YBR215W DOS2P54858 310 aa6.27□□□□□ -1.41
HPC2YBR215W SSF1P38789 453 aaPredicted RBP6.26□□□□□ -1.41
HPC2YBR215W ISW2Q08773 1120 aa6.26□□□□□ -1.41
HPC2YBR215W SSP1P38871 571 aa6.25□□□□□ -1.41
HPC2YBR215W MRX12P47084 519 aa6.25□□□□□ -1.41
HPC2YBR215W YTA7P40340 1379 aa6.24□□□□□ -1.41
HPC2YBR215W PAM1P37304 830 aaKnown RBP6.24□□□□□ -1.41
HPC2YBR215W ISW1P38144 1129 aa6.24□□□□□ -1.41
HPC2YBR215W PDR1P12383 1068 aa6.23□□□□□ -1.41
HPC2YBR215W GEF1P37020 779 aa6.23□□□□□ -1.41
HPC2YBR215W MET10P39692 1035 aa6.22□□□□□ -1.41
HPC2YBR215W RSE1Q04693 1361 aaKnown RBP6.22□□□□□ -1.41
HPC2YBR215W ZDS1P50111 915 aaKnown RBP6.21□□□□□ -1.42
HPC2YBR215W NAB3P38996 802 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
HPC2YBR215W SSA1P10591 642 aaKnown RBP6.19□□□□□ -1.42
HPC2YBR215W DEF1P35732 738 aaKnown RBP6.19□□□□□ -1.42
HPC2YBR215W KIP3P53086 805 aaKnown RBP6.19□□□□□ -1.42
HPC2YBR215W MAM3Q12296 706 aa6.18□□□□□ -1.42
HPC2YBR215W NHA1Q99271 985 aa6.17□□□□□ -1.42
HPC2YBR215W SSA2P10592 639 aaKnown RBP6.15□□□□□ -1.42
HPC2YBR215W OCA5P38738 679 aa6.15□□□□□ -1.42
HPC2YBR215W SPB4P25808 606 aaPredicted RBP6.15□□□□□ -1.43
HPC2YBR215W RPS0AP32905 252 aaKnown RBP6.15□□□□□ -1.43
HPC2YBR215W RPG1P38249 964 aaKnown RBP6.15□□□□□ -1.43
HPC2YBR215W MRPL32P25348 183 aa6.14□□□□□ -1.43
HPC2YBR215W BRE1Q07457 700 aaKnown RBP6.14□□□□□ -1.43
HPC2YBR215W SUB2Q07478 446 aaKnown RBP6.14□□□□□ -1.43
HPC2YBR215W AIM21P40563 679 aa6.13□□□□□ -1.43
HPC2YBR215W UBX5Q06682 500 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms