RNA–Protein interactions for RNA: YAL031C

GIP4, Transcript of Cytoplasmic protein that regulates protein phosphatase 1 Glc7p, yeast

Gene GIP4, Length 2,283 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIP4	YAL031C	YHL050C	P38721	697 aa		5.07	□□□□□ -1.6
GIP4	YAL031C	YHR219W	P38900	624 aa		5.07	□□□□□ -1.6
GIP4	YAL031C	HOS2	P53096	452 aa	Predicted RBP	5.07	□□□□□ -1.6
GIP4	YAL031C	FOL1	P53848	824 aa		5.07	□□□□□ -1.6
GIP4	YAL031C	YDR341C	Q05506	607 aa	Known RBP	5.07	□□□□□ -1.6
GIP4	YAL031C	YEL077C	Q3E7X8	1277 aa		5.07	□□□□□ -1.6
GIP4	YAL031C	SPT2	P06843	333 aa	Predicted RBP	5.07	□□□□□ -1.6
GIP4	YAL031C	MEP1	P40260	492 aa		5.07	□□□□□ -1.6
GIP4	YAL031C	MDJ2	P42834	146 aa		5.07	□□□□□ -1.6
GIP4	YAL031C	PEX8	P53248	589 aa		5.07	□□□□□ -1.6
GIP4	YAL031C	ALD6	P54115	500 aa	Known RBP	5.07	□□□□□ -1.6
GIP4	YAL031C	MTC5	Q03897	1148 aa		5.07	□□□□□ -1.6
GIP4	YAL031C	MPH2	P0CD99	609 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	MPH3	P0CE00	602 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	SWI3	P32591	825 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	IES5	P40060	125 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	MNL2	Q12205	849 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	YGR161W-C	Q3E744	92 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	COX6	P00427	148 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	DPS1	P04802	557 aa	Known RBP	5.06	□□□□□ -1.6
GIP4	YAL031C	MET1	P36150	593 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	VID27	P40157	782 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	DJP1	P40564	432 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	YJR107W	P47145	328 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	YGL081W	P53156	320 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	YLR257W	Q06146	321 aa	Known RBP	5.06	□□□□□ -1.6
GIP4	YAL031C	CDC45	Q08032	650 aa		5.06	□□□□□ -1.6
GIP4	YAL031C	MCM1	P11746	286 aa		5.05	□□□□□ -1.6
GIP4	YAL031C	RAD27	P26793	382 aa		5.05	□□□□□ -1.6
GIP4	YAL031C	YGR021W	P53212	290 aa		5.05	□□□□□ -1.6
GIP4	YAL031C	YNL058C	P53947	316 aa		5.05	□□□□□ -1.6
GIP4	YAL031C	IRC3	Q06683	689 aa		5.05	□□□□□ -1.6
GIP4	YAL031C	FOB1	O13329	566 aa		5.04	□□□□□ -1.6
GIP4	YAL031C	UBP14	P38237	781 aa	Known RBP	5.04	□□□□□ -1.6
GIP4	YAL031C	HXT5	P38695	592 aa		5.04	□□□□□ -1.6
GIP4	YAL031C	YNL108C	P53929	270 aa		5.04	□□□□□ -1.6
GIP4	YAL031C	HEL2	Q05580	639 aa	Known RBP	5.04	□□□□□ -1.6
GIP4	YAL031C	ESF1	Q06344	628 aa	Known RBP	5.04	□□□□□ -1.6
GIP4	YAL031C	PSR1	Q07800	427 aa		5.04	□□□□□ -1.6
GIP4	YAL031C	PIF1	P07271	859 aa		5.04	□□□□□ -1.6
GIP4	YAL031C	MAK11	P20484	414 aa	Known RBP	5.04	□□□□□ -1.6
GIP4	YAL031C	NPL4	P33755	580 aa		5.04	□□□□□ -1.6
GIP4	YAL031C	CLF1	Q12309	687 aa	Predicted RBP	5.04	□□□□□ -1.6
GIP4	YAL031C	SIT4	P20604	311 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	RAD51	P25454	400 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	YGL015C	P33199	130 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	BOI1	P38041	980 aa	Known RBP	5.03	□□□□□ -1.6
GIP4	YAL031C	RKM3	P38222	552 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	BFA1	P47113	574 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	GPI8	P49018	411 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	PLP2	Q12017	286 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	CYB2	P00175	591 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	RNA1	P11745	407 aa	Known RBP	5.03	□□□□□ -1.6
GIP4	YAL031C	TAT2	P38967	592 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	RTF1	P53064	558 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	MTO1	P53070	669 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	PRP43	P53131	767 aa	Known RBP	5.03	□□□□□ -1.6
GIP4	YAL031C	BDF2	Q07442	638 aa		5.03	□□□□□ -1.6
GIP4	YAL031C	HSP82	P02829	709 aa	Known RBP	5.02	□□□□□ -1.61
GIP4	YAL031C	AI2	P03876	854 aa		5.02	□□□□□ -1.61
GIP4	YAL031C	SUP45	P12385	437 aa	Known RBP	5.02	□□□□□ -1.61
GIP4	YAL031C	PPH3	P32345	308 aa		5.02	□□□□□ -1.61
GIP4	YAL031C	TGL4	P36165	910 aa		5.02	□□□□□ -1.61
GIP4	YAL031C	SEC9	P40357	651 aa		5.02	□□□□□ -1.61
GIP4	YAL031C	DAK2	P43550	591 aa		5.02	□□□□□ -1.61
GIP4	YAL031C	MTR4	P47047	1073 aa	Known RBP	5.02	□□□□□ -1.61
GIP4	YAL031C	TEA1	P47988	759 aa		5.02	□□□□□ -1.61
GIP4	YAL031C	ATG16	Q03818	150 aa		5.02	□□□□□ -1.61
GIP4	YAL031C	PHM6	Q05637	104 aa		5.02	□□□□□ -1.61
GIP4	YAL031C	CFT2	Q12102	859 aa	Predicted RBP	5.02	□□□□□ -1.61
GIP4	YAL031C	HSP42	Q12329	375 aa		5.02	□□□□□ -1.61
GIP4	YAL031C	ENO1	P00924	437 aa	Known RBP	5.02	□□□□□ -1.61
GIP4	YAL031C	PAF1	P38351	445 aa		5.02	□□□□□ -1.61
GIP4	YAL031C	SEC27	P41811	889 aa	Known RBP	5.02	□□□□□ -1.61
GIP4	YAL031C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
GIP4	YAL031C	FYV10	P40492	516 aa		5.01	□□□□□ -1.61
GIP4	YAL031C	SRP1	Q02821	542 aa	Known RBP	5.01	□□□□□ -1.61
GIP4	YAL031C	VPS16	Q03308	798 aa		5.01	□□□□□ -1.61
GIP4	YAL031C	RCF1	Q03713	159 aa		5.01	□□□□□ -1.61
GIP4	YAL031C	MRX10	Q05648	414 aa		5.01	□□□□□ -1.61
GIP4	YAL031C	PPM2	Q08282	695 aa		5.01	□□□□□ -1.61
GIP4	YAL031C	MET6	P05694	767 aa	Known RBP	5	□□□□□ -1.61
GIP4	YAL031C	HSC82	P15108	705 aa	Known RBP	5	□□□□□ -1.61
GIP4	YAL031C	BRF1	P29056	596 aa		5	□□□□□ -1.61
GIP4	YAL031C	YBL036C	P38197	257 aa		5	□□□□□ -1.61
GIP4	YAL031C	CDC53	Q12018	815 aa	Known RBP	5	□□□□□ -1.61
GIP4	YAL031C	RRI2	Q12348	645 aa		5	□□□□□ -1.61
GIP4	YAL031C	RAD4	P14736	754 aa		5	□□□□□ -1.61
GIP4	YAL031C	YKR023W	P36119	530 aa	Known RBP	5	□□□□□ -1.61
GIP4	YAL031C	EMP47	P43555	445 aa		5	□□□□□ -1.61
GIP4	YAL031C	PRP3	Q03338	469 aa	Predicted RBP	5	□□□□□ -1.61
GIP4	YAL031C	RRP9	Q06506	573 aa	Known RBP	5	□□□□□ -1.61
GIP4	YAL031C	GRC3	Q07845	632 aa		5	□□□□□ -1.61
GIP4	YAL031C	TYW1	Q08960	810 aa	Known RBP	5	□□□□□ -1.61
GIP4	YAL031C	PUS1	Q12211	544 aa	Known RBP	5	□□□□□ -1.61
GIP4	YAL031C	ABZ1	P37254	787 aa	Predicted RBP	4.99	□□□□□ -1.61
GIP4	YAL031C	YAP1801	P38856	637 aa		4.99	□□□□□ -1.61
GIP4	YAL031C	SNF7	P39929	240 aa	Known RBP	4.99	□□□□□ -1.61
GIP4	YAL031C	YCK3	P39962	524 aa		4.99	□□□□□ -1.61
GIP4	YAL031C	MSH4	P40965	878 aa	Predicted RBP	4.99	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms