RNA–Protein interactions for RNA: YAL031C

GIP4, Transcript of Cytoplasmic protein that regulates protein phosphatase 1 Glc7p, yeast

Gene GIP4, Length 2,283 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIP4	YAL031C	DRS1	P32892	752 aa	Known RBP	7.92	□□□□□ -1.14
GIP4	YAL031C	RQC2	Q12532	1038 aa	Known RBP	7.68	□□□□□ -1.18
GIP4	YAL031C	TFA1	P36100	482 aa		7.68	□□□□□ -1.18
GIP4	YAL031C	TAF7	Q05021	590 aa		7.5	□□□□□ -1.21
GIP4	YAL031C	BFR2	Q06631	534 aa	Known RBP	7.3	□□□□□ -1.24
GIP4	YAL031C	MTC1	P47018	478 aa	Known RBP	6.81	□□□□□ -1.32
GIP4	YAL031C	DMA1	P38823	416 aa		6.77	□□□□□ -1.33
GIP4	YAL031C	LEO1	P38439	464 aa		6.72	□□□□□ -1.33
GIP4	YAL031C	AVT3	P36062	692 aa		6.67	□□□□□ -1.34
GIP4	YAL031C	URN1	Q06525	465 aa	Known RBP	6.54	□□□□□ -1.36
GIP4	YAL031C	IOC4	Q04213	475 aa		6.42	□□□□□ -1.38
GIP4	YAL031C	NAP1	P25293	417 aa	Known RBP	6.39	□□□□□ -1.39
GIP4	YAL031C	DIP2	Q12220	943 aa	Predicted RBP	6.39	□□□□□ -1.39
GIP4	YAL031C	IFH1	P39520	1085 aa		6.34	□□□□□ -1.39
GIP4	YAL031C	ABP1	P15891	592 aa	Known RBP	6.29	□□□□□ -1.4
GIP4	YAL031C	FAP1	P53971	965 aa		6.24	□□□□□ -1.41
GIP4	YAL031C	LEU3	P08638	886 aa		6.23	□□□□□ -1.41
GIP4	YAL031C	ORC1	P54784	914 aa	Predicted RBP	6.22	□□□□□ -1.41
GIP4	YAL031C	DMA2	P53924	522 aa		6.22	□□□□□ -1.41
GIP4	YAL031C	AIM44	Q99299	758 aa		6.17	□□□□□ -1.42
GIP4	YAL031C	SAS10	Q12136	610 aa	Predicted RBP	6.08	□□□□□ -1.44
GIP4	YAL031C	YRB30	P53107	440 aa	Predicted RBP	6.06	□□□□□ -1.44
GIP4	YAL031C	RLF2	Q12495	606 aa		6.05	□□□□□ -1.44
GIP4	YAL031C	PTP3	P40048	928 aa		6	□□□□□ -1.45
GIP4	YAL031C	SNU71	P53207	620 aa	Known RBP	5.99	□□□□□ -1.45
GIP4	YAL031C	TOP1	P04786	769 aa		5.96	□□□□□ -1.45
GIP4	YAL031C	RPN1	P38764	993 aa	Known RBP	5.91	□□□□□ -1.46
GIP4	YAL031C	YFR016C	P43597	1233 aa	Known RBP	5.91	□□□□□ -1.46
GIP4	YAL031C	KRI1	P42846	591 aa	Known RBP	5.87	□□□□□ -1.47
GIP4	YAL031C	YML020W	Q03722	664 aa		5.87	□□□□□ -1.47
GIP4	YAL031C	SIS2	P36024	562 aa		5.86	□□□□□ -1.47
GIP4	YAL031C	NOP8	Q08287	484 aa	Predicted RBP	5.86	□□□□□ -1.47
GIP4	YAL031C	ATG36	P46983	293 aa		5.85	□□□□□ -1.47
GIP4	YAL031C	SWE1	P32944	819 aa		5.81	□□□□□ -1.48
GIP4	YAL031C	PRY3	P47033	881 aa		5.81	□□□□□ -1.48
GIP4	YAL031C	BRL1	P38770	471 aa		5.79	□□□□□ -1.48
GIP4	YAL031C	CKB1	P43639	278 aa		5.79	□□□□□ -1.48
GIP4	YAL031C	MDG1	P53885	366 aa		5.77	□□□□□ -1.49
GIP4	YAL031C	LAM6	Q08001	693 aa		5.76	□□□□□ -1.49
GIP4	YAL031C	NUG1	P40010	520 aa	Known RBP	5.74	□□□□□ -1.49
GIP4	YAL031C	SSP1	P38871	571 aa		5.72	□□□□□ -1.49
GIP4	YAL031C	SLX8	P40072	274 aa		5.71	□□□□□ -1.5
GIP4	YAL031C	TPO2	P53283	614 aa		5.71	□□□□□ -1.5
GIP4	YAL031C	GIN4	Q12263	1142 aa		5.71	□□□□□ -1.5
GIP4	YAL031C	FAR11	P53917	953 aa		5.68	□□□□□ -1.5
GIP4	YAL031C	CWC22	P53333	577 aa	Known RBP	5.68	□□□□□ -1.5
GIP4	YAL031C	RPS0B	P46654	252 aa	Known RBP	5.67	□□□□□ -1.5
GIP4	YAL031C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
GIP4	YAL031C	RSE1	Q04693	1361 aa	Known RBP	5.66	□□□□□ -1.5
GIP4	YAL031C	MRX12	P47084	519 aa		5.65	□□□□□ -1.5
GIP4	YAL031C	SPC42	P36094	363 aa		5.64	□□□□□ -1.51
GIP4	YAL031C	NOP7	P53261	605 aa	Known RBP	5.64	□□□□□ -1.51
GIP4	YAL031C	MNN4	P36044	1178 aa		5.64	□□□□□ -1.51
GIP4	YAL031C	EBP2	P36049	427 aa	Known RBP	5.63	□□□□□ -1.51
GIP4	YAL031C	PAM1	P37304	830 aa	Known RBP	5.63	□□□□□ -1.51
GIP4	YAL031C	MAM3	Q12296	706 aa		5.62	□□□□□ -1.51
GIP4	YAL031C	BRN1	P38170	754 aa		5.62	□□□□□ -1.51
GIP4	YAL031C	RTS3	P53289	263 aa		5.62	□□□□□ -1.51
GIP4	YAL031C	YJR008W	P47085	338 aa		5.61	□□□□□ -1.51
GIP4	YAL031C	VPS72	Q03388	795 aa		5.61	□□□□□ -1.51
GIP4	YAL031C	SUB1	P54000	292 aa	Known RBP	5.6	□□□□□ -1.51
GIP4	YAL031C	ASF1	P32447	279 aa		5.6	□□□□□ -1.51
GIP4	YAL031C	GEF1	P37020	779 aa		5.6	□□□□□ -1.51
GIP4	YAL031C	SSF1	P38789	453 aa	Predicted RBP	5.59	□□□□□ -1.51
GIP4	YAL031C	DOS2	P54858	310 aa		5.59	□□□□□ -1.51
GIP4	YAL031C	BUD21	Q08492	214 aa	Predicted RBP	5.59	□□□□□ -1.51
GIP4	YAL031C	YTA7	P40340	1379 aa		5.59	□□□□□ -1.52
GIP4	YAL031C	SSA1	P10591	642 aa	Known RBP	5.58	□□□□□ -1.52
GIP4	YAL031C	OSW7	P43611	510 aa		5.58	□□□□□ -1.52
GIP4	YAL031C	AAD16	Q02895	342 aa		5.58	□□□□□ -1.52
GIP4	YAL031C	SPB4	P25808	606 aa	Predicted RBP	5.57	□□□□□ -1.52
GIP4	YAL031C	SUB2	Q07478	446 aa	Known RBP	5.57	□□□□□ -1.52
GIP4	YAL031C	KIN1	P13185	1064 aa		5.56	□□□□□ -1.52
GIP4	YAL031C	RLP24	Q07915	199 aa	Known RBP	5.56	□□□□□ -1.52
GIP4	YAL031C	MET10	P39692	1035 aa		5.55	□□□□□ -1.52
GIP4	YAL031C	TOA1	P32773	286 aa		5.55	□□□□□ -1.52
GIP4	YAL031C	ISW1	P38144	1129 aa		5.55	□□□□□ -1.52
GIP4	YAL031C	PDR1	P12383	1068 aa		5.54	□□□□□ -1.52
GIP4	YAL031C	OCA5	P38738	679 aa		5.54	□□□□□ -1.52
GIP4	YAL031C	RIM101	P33400	625 aa		5.53	□□□□□ -1.52
GIP4	YAL031C	HAA1	Q12753	694 aa	Known RBP	5.53	□□□□□ -1.52
GIP4	YAL031C	RRN6	P32786	894 aa		5.51	□□□□□ -1.53
GIP4	YAL031C	HIF1	Q12373	385 aa		5.51	□□□□□ -1.53
GIP4	YAL031C	ZDS1	P50111	915 aa	Known RBP	5.51	□□□□□ -1.53
GIP4	YAL031C	GUA1	P38625	525 aa	Known RBP	5.49	□□□□□ -1.53
GIP4	YAL031C	UBX5	Q06682	500 aa		5.48	□□□□□ -1.53
GIP4	YAL031C	YLR271W	Q06152	274 aa		5.47	□□□□□ -1.53
GIP4	YAL031C	ALD4	P46367	519 aa	Known RBP	5.46	□□□□□ -1.53
GIP4	YAL031C	KIP3	P53086	805 aa	Known RBP	5.46	□□□□□ -1.53
GIP4	YAL031C	SEN54	Q02825	467 aa	Predicted RBP	5.46	□□□□□ -1.54
GIP4	YAL031C	PSH1	Q12161	406 aa		5.46	□□□□□ -1.54
GIP4	YAL031C	OXP1	P28273	1286 aa		5.45	□□□□□ -1.54
GIP4	YAL031C	YAF9	P53930	226 aa		5.45	□□□□□ -1.54
GIP4	YAL031C	YPR148C	Q06523	435 aa		5.45	□□□□□ -1.54
GIP4	YAL031C	DSF2	P38213	736 aa		5.44	□□□□□ -1.54
GIP4	YAL031C	BRE1	Q07457	700 aa	Known RBP	5.44	□□□□□ -1.54
GIP4	YAL031C	AIM21	P40563	679 aa		5.44	□□□□□ -1.54
GIP4	YAL031C	YNR021W	P53723	404 aa	Known RBP	5.44	□□□□□ -1.54
GIP4	YAL031C	PMC1	P38929	1173 aa	Predicted RBP	5.43	□□□□□ -1.54
GIP4	YAL031C	VPS70	P47161	811 aa		5.43	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms