RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	STD1	Q02794	444 aa		0.87	□□□□□ -2.27
UBP3	YER151C	ATG21	Q02887	496 aa		0.87	□□□□□ -2.27
UBP3	YER151C	GIP3	Q03016	1276 aa		0.87	□□□□□ -2.27
UBP3	YER151C	YDR209C	Q03480	137 aa		0.87	□□□□□ -2.27
UBP3	YER151C	HRD1	Q08109	551 aa		0.87	□□□□□ -2.27
UBP3	YER151C	DIS3	Q08162	1001 aa	Known RBP	0.87	□□□□□ -2.27
UBP3	YER151C	RSA1	Q08932	381 aa		0.87	□□□□□ -2.27
UBP3	YER151C	ACC1	Q00955	2233 aa	Known RBP	0.87	□□□□□ -2.27
UBP3	YER151C	RPB2	P08518	1224 aa	Known RBP	0.87	□□□□□ -2.27
UBP3	YER151C	HXT2	P23585	541 aa		0.87	□□□□□ -2.27
UBP3	YER151C	DPB3	P27344	201 aa		0.87	□□□□□ -2.27
UBP3	YER151C	ROT2	P38138	954 aa		0.87	□□□□□ -2.27
UBP3	YER151C	SWC5	P38326	303 aa		0.87	□□□□□ -2.27
UBP3	YER151C	HTD2	P38790	280 aa	Known RBP	0.87	□□□□□ -2.27
UBP3	YER151C	ANS1	P38832	159 aa		0.87	□□□□□ -2.27
UBP3	YER151C	SMF1	P38925	575 aa		0.87	□□□□□ -2.27
UBP3	YER151C	PHO86	P46956	311 aa		0.87	□□□□□ -2.27
UBP3	YER151C	SFH5	P47008	294 aa		0.87	□□□□□ -2.27
UBP3	YER151C	PIL1	P53252	339 aa	Known RBP	0.87	□□□□□ -2.27
UBP3	YER151C	INN1	P53901	409 aa		0.87	□□□□□ -2.27
UBP3	YER151C	YMR254C	Q04838	102 aa		0.87	□□□□□ -2.27
UBP3	YER151C	PRP11	Q07350	266 aa	Predicted RBP	0.87	□□□□□ -2.27
UBP3	YER151C	YLL007C	Q07799	665 aa		0.87	□□□□□ -2.27
UBP3	YER151C	AAD15	Q08361	143 aa		0.87	□□□□□ -2.27
UBP3	YER151C	YPL162C	Q12042	273 aa		0.87	□□□□□ -2.27
UBP3	YER151C	SWT1	Q12104	458 aa		0.87	□□□□□ -2.27
UBP3	YER151C	BAG7	Q12128	409 aa		0.87	□□□□□ -2.27
UBP3	YER151C	PER33	Q12144	273 aa		0.87	□□□□□ -2.27
UBP3	YER151C	MSF1	P08425	469 aa		0.86	□□□□□ -2.27
UBP3	YER151C	RPL1A	P0CX43	217 aa	Known RBP	0.86	□□□□□ -2.27
UBP3	YER151C	RPL1B	P0CX44	217 aa	Known RBP	0.86	□□□□□ -2.27
UBP3	YER151C	CWP1	P28319	239 aa		0.86	□□□□□ -2.27
UBP3	YER151C	DEP1	P31385	405 aa		0.86	□□□□□ -2.27
UBP3	YER151C	FPR2	P32472	135 aa		0.86	□□□□□ -2.27
UBP3	YER151C	SKN1	P33336	771 aa		0.86	□□□□□ -2.27
UBP3	YER151C	SCO2	P38072	301 aa		0.86	□□□□□ -2.27
UBP3	YER151C	YBR013C	P38215	129 aa		0.86	□□□□□ -2.27
UBP3	YER151C	ARN2	P38724	620 aa		0.86	□□□□□ -2.27
UBP3	YER151C	AIM18	P38884	321 aa		0.86	□□□□□ -2.27
UBP3	YER151C	YEL073C	P39974	107 aa		0.86	□□□□□ -2.27
UBP3	YER151C	COG3	P40094	801 aa		0.86	□□□□□ -2.27
UBP3	YER151C	PDS1	P40316	373 aa	Predicted RBP	0.86	□□□□□ -2.27
UBP3	YER151C	YIL001W	P40560	513 aa		0.86	□□□□□ -2.27
UBP3	YER151C	TRS85	P46944	698 aa		0.86	□□□□□ -2.27
UBP3	YER151C	CTK2	P46962	323 aa		0.86	□□□□□ -2.27
UBP3	YER151C	ALB1	P47019	175 aa	Predicted RBP	0.86	□□□□□ -2.27
UBP3	YER151C	MDM34	P53083	459 aa		0.86	□□□□□ -2.27
UBP3	YER151C	DCP2	P53550	970 aa	Known RBP	0.86	□□□□□ -2.27
UBP3	YER151C	HHT1	P61830	136 aa		0.86	□□□□□ -2.27
UBP3	YER151C	SED5	Q01590	340 aa		0.86	□□□□□ -2.27
UBP3	YER151C	RLI1	Q03195	608 aa	Known RBP	0.86	□□□□□ -2.27
UBP3	YER151C	YMR178W	Q03219	274 aa	Known RBP	0.86	□□□□□ -2.27
UBP3	YER151C	TAF12	Q03761	539 aa		0.86	□□□□□ -2.27
UBP3	YER151C	ERB1	Q04660	807 aa	Known RBP	0.86	□□□□□ -2.27
UBP3	YER151C	YLR352W	Q06479	807 aa		0.86	□□□□□ -2.27
UBP3	YER151C	SRL2	Q12020	392 aa		0.86	□□□□□ -2.27
UBP3	YER151C	NMD4	Q12129	218 aa		0.86	□□□□□ -2.27
UBP3	YER151C	LSP1	Q12230	341 aa	Known RBP	0.86	□□□□□ -2.27
UBP3	YER151C	SRN2	Q99176	213 aa		0.86	□□□□□ -2.27
UBP3	YER151C	RAP1	P11938	827 aa		0.86	□□□□□ -2.27
UBP3	YER151C	MSS116	P15424	664 aa	Known RBP	0.86	□□□□□ -2.27
UBP3	YER151C	PET9	P18239	318 aa	Known RBP	0.86	□□□□□ -2.27
UBP3	YER151C	SCO1	P23833	295 aa		0.86	□□□□□ -2.27
UBP3	YER151C	YCR022C	P25620	114 aa		0.86	□□□□□ -2.27
UBP3	YER151C	ADE1	P27616	306 aa		0.86	□□□□□ -2.27
UBP3	YER151C	MSP1	P28737	362 aa		0.86	□□□□□ -2.27
UBP3	YER151C	MFT1	P33441	392 aa	Known RBP	0.86	□□□□□ -2.27
UBP3	YER151C	HEL1	P36113	551 aa		0.86	□□□□□ -2.27
UBP3	YER151C	SPP381	P38282	291 aa	Predicted RBP	0.86	□□□□□ -2.27
UBP3	YER151C	ALP1	P38971	573 aa		0.86	□□□□□ -2.27
UBP3	YER151C	GIM4	P40005	111 aa	Known RBP	0.86	□□□□□ -2.27
UBP3	YER151C	MRX1	P40050	688 aa		0.86	□□□□□ -2.27
UBP3	YER151C	WSC2	P53832	503 aa		0.86	□□□□□ -2.27
UBP3	YER151C	TAF9	Q05027	157 aa		0.86	□□□□□ -2.27
UBP3	YER151C	POS5	Q06892	414 aa		0.86	□□□□□ -2.27
UBP3	YER151C	NCE102	Q12207	173 aa	RIP-Chip data	0.86	□□□□□ -2.27	not detected
UBP3	YER151C	YBR298C-A	Q8TGK4	73 aa		0.86	□□□□□ -2.27
UBP3	YER151C	BI3	Q9ZZW7	517 aa		0.86	□□□□□ -2.27
UBP3	YER151C	SCH9	P11792	824 aa	Known RBP	0.85	□□□□□ -2.27
UBP3	YER151C	KAR3	P17119	729 aa		0.85	□□□□□ -2.27
UBP3	YER151C	MRPL25	P23369	157 aa		0.85	□□□□□ -2.27
UBP3	YER151C	LSB5	P25369	354 aa		0.85	□□□□□ -2.27
UBP3	YER151C	GFD2	P25370	566 aa	Known RBP	0.85	□□□□□ -2.27
UBP3	YER151C	MRP20	P32387	263 aa		0.85	□□□□□ -2.27
UBP3	YER151C	ASF2	P32448	525 aa	Predicted RBP	0.85	□□□□□ -2.27
UBP3	YER151C	MNS1	P32906	549 aa		0.85	□□□□□ -2.27
UBP3	YER151C	RRN3	P36070	627 aa		0.85	□□□□□ -2.27
UBP3	YER151C	THI2	P38141	450 aa		0.85	□□□□□ -2.27
UBP3	YER151C	TSC10	P38342	320 aa		0.85	□□□□□ -2.27
UBP3	YER151C	MPC2	P38857	129 aa		0.85	□□□□□ -2.27
UBP3	YER151C	FLC2	P39719	783 aa		0.85	□□□□□ -2.27
UBP3	YER151C	MRPL49	P40858	161 aa	Predicted RBP	0.85	□□□□□ -2.27
UBP3	YER151C	SNG1	P46950	547 aa		0.85	□□□□□ -2.27
UBP3	YER151C	COS1	P53822	381 aa		0.85	□□□□□ -2.27
UBP3	YER151C	YLR460C	P54007	376 aa		0.85	□□□□□ -2.27
UBP3	YER151C	MRS2	Q01926	470 aa		0.85	□□□□□ -2.27
UBP3	YER151C	NUP116	Q02630	1113 aa		0.85	□□□□□ -2.27
UBP3	YER151C	YET2	Q04210	160 aa		0.85	□□□□□ -2.27
UBP3	YER151C	SNO4	Q04902	237 aa		0.85	□□□□□ -2.27
UBP3	YER151C	LOT6	Q07923	191 aa		0.85	□□□□□ -2.27

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