Protein–RNA interactions for Protein: P28319

CWP1, Cell wall protein CWP1, yeastyeast

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CWP1P28319 YML009W-BYML009W-B 477 nt19.73■□□□□ 0.75
CWP1P28319 NOP1YDL014W 984 nt19.38■□□□□ 0.69
CWP1P28319 NSR1YGR159C 1245 nt19.35■□□□□ 0.69
CWP1P28319 YKL036CYKL036C 393 nt18.17■□□□□ 0.5
CWP1P28319 Q0297Q0297 156 nt17.06■□□□□ 0.32
CWP1P28319 YJL027CYJL027C 417 nt17.01■□□□□ 0.31
CWP1P28319 SRX1YKL086W 384 nt16.91■□□□□ 0.3
CWP1P28319 MDJ1YFL016C 1536 nt16.79■□□□□ 0.28
CWP1P28319 SCS3YGL126W 1143 nt16.69■□□□□ 0.26
CWP1P28319 YCR051WYCR051W 669 nt16.03■□□□□ 0.16
CWP1P28319 YOL085CYOL085C 342 nt15.71■□□□□ 0.11
CWP1P28319 PKP1YIL042C 1185 nt15.38■□□□□ 0.05
CWP1P28319 RPP1BYDL130W 321 nt15.3■□□□□ 0.04
CWP1P28319 SCJ1YMR214W 1134 nt15.3■□□□□ 0.04
CWP1P28319 TRN1tP(UGG)A 72 nt15.08■□□□□ 0
CWP1P28319 SUF9tP(UGG)F 72 nt15.08■□□□□ 0
CWP1P28319 SUF8tP(UGG)H 72 nt15.08■□□□□ 0
CWP1P28319 tP(UGG)LtP(UGG)L 72 nt15.08■□□□□ 0
CWP1P28319 SUF7tP(UGG)M 72 nt15.08■□□□□ 0
CWP1P28319 tP(UGG)N1tP(UGG)N1 72 nt15.08■□□□□ 0
CWP1P28319 tP(UGG)N2tP(UGG)N2 72 nt15.08■□□□□ 0
CWP1P28319 tP(UGG)O1tP(UGG)O1 72 nt15.08■□□□□ 0
CWP1P28319 SUF11tP(UGG)O2 72 nt15.08■□□□□ 0
CWP1P28319 ATS1YAL020C 1002 nt15.03■□□□□ -0
CWP1P28319 DBP2YNL112W 1641 nt15.01□□□□□ -0.01
CWP1P28319 CCC1YLR220W 969 nt14.87□□□□□ -0.03
CWP1P28319 PET122YER153C 765 nt14.55□□□□□ -0.08
CWP1P28319 SCR1SCR1 522 nt14.53□□□□□ -0.08
CWP1P28319 tP(UGG)O3tP(UGG)O3 72 nt14.37□□□□□ -0.11
CWP1P28319 YBR190WYBR190W 312 nt14.28□□□□□ -0.12
CWP1P28319 RVS167YDR388W 1449 nt14.25□□□□□ -0.13
CWP1P28319 RRN5YLR141W 1092 nt14.15□□□□□ -0.14
CWP1P28319 RSB1YOR049C 1065 nt13.98□□□□□ -0.17
CWP1P28319 RTC3YHR087W 336 nt13.94□□□□□ -0.18
CWP1P28319 YDJ1YNL064C 1230 nt13.93□□□□□ -0.18
CWP1P28319 YER088W-BYER088W-B 147 nt13.9□□□□□ -0.18
CWP1P28319 PST2YDR032C 597 nt13.86□□□□□ -0.19
CWP1P28319 SHR5YOL110W 714 nt13.83□□□□□ -0.2
CWP1P28319 GAR1YHR089C 618 nt13.51□□□□□ -0.25
CWP1P28319 YKL097CYKL097C 411 nt13.51□□□□□ -0.25
CWP1P28319 DEP1YAL013W 1218 nt13.24□□□□□ -0.29
CWP1P28319 SHU1YHL006C 453 nt13.2□□□□□ -0.3
CWP1P28319 URN1YPR152C 1398 nt13.19□□□□□ -0.3
CWP1P28319 YNL208WYNL208W 600 nt13.14□□□□□ -0.31
CWP1P28319 RPN10YHR200W 807 nt13.13□□□□□ -0.31
CWP1P28319 TIR1YER011W 765 nt13.06□□□□□ -0.32
CWP1P28319 OPI9YLR338W 858 nt12.95□□□□□ -0.34
CWP1P28319 YOR139CYOR139C 393 nt12.87□□□□□ -0.35
CWP1P28319 YAL037C-BYAL037C-B 975 nt12.83□□□□□ -0.36
CWP1P28319 SSA1YAL005C 1929 nt12.82□□□□□ -0.36
CWP1P28319 SAH1YER043C 1350 nt12.74□□□□□ -0.37
CWP1P28319 NPL3YDR432W 1245 nt12.71□□□□□ -0.37
CWP1P28319 SSA3YBL075C 1950 nt12.7□□□□□ -0.38
CWP1P28319 PUT4YOR348C 1884 nt12.68□□□□□ -0.38
CWP1P28319 YGR021WYGR021W 873 nt12.63□□□□□ -0.39
CWP1P28319 SRB2YHR041C 633 nt12.63□□□□□ -0.39
CWP1P28319 YJR018WYJR018W 363 nt12.61□□□□□ -0.39
CWP1P28319 PUN1YLR414C 792 nt12.6□□□□□ -0.39
CWP1P28319 HOM6YJR139C 1080 nt12.57□□□□□ -0.4
CWP1P28319 ARE1YCR048W 1833 nt12.55□□□□□ -0.4
CWP1P28319 YOL037CYOL037C 354 nt12.53□□□□□ -0.4
CWP1P28319 WWM1YFL010C 636 nt12.52□□□□□ -0.41
CWP1P28319 MNP1YGL068W 585 nt12.52□□□□□ -0.41
CWP1P28319 RPP2BYDR382W 333 nt12.48□□□□□ -0.41
CWP1P28319 YJR120WYJR120W 351 nt12.48□□□□□ -0.41
CWP1P28319 RKM5YLR137W 1104 nt12.39□□□□□ -0.43
CWP1P28319 YHR049C-AYHR049C-A 297 nt12.38□□□□□ -0.43
CWP1P28319 YFL021C-AYFL021C-A 855 nt12.37□□□□□ -0.43
CWP1P28319 tM(CAU)CtM(CAU)C 72 nt12.36□□□□□ -0.43
CWP1P28319 IMT4tM(CAU)E 72 nt12.36□□□□□ -0.43
CWP1P28319 IMT3tM(CAU)J3 72 nt12.36□□□□□ -0.43
CWP1P28319 IMT1tM(CAU)O1 72 nt12.36□□□□□ -0.43
CWP1P28319 IMT2tM(CAU)P 72 nt12.36□□□□□ -0.43
CWP1P28319 PTC2YER089C 1395 nt12.34□□□□□ -0.43
CWP1P28319 POA1YBR022W 534 nt12.29□□□□□ -0.44
CWP1P28319 BDH2YAL061W 1254 nt12.28□□□□□ -0.44
CWP1P28319 LSM3YLR438C-A 270 nt12.21□□□□□ -0.45
CWP1P28319 YLR281CYLR281C 468 nt12.18□□□□□ -0.46
CWP1P28319 NAB2YGL122C 1578 nt12.16□□□□□ -0.46
CWP1P28319 INM2YDR287W 879 nt12.15□□□□□ -0.46
CWP1P28319 PUS2YGL063W 1113 nt12.13□□□□□ -0.47
CWP1P28319 BUD23YCR047C 828 nt12.1□□□□□ -0.47
CWP1P28319 DAL1YIR027C 1383 nt12.07□□□□□ -0.48
CWP1P28319 YBL100CYBL100C 315 nt12.07□□□□□ -0.48
CWP1P28319 WHI5YOR083W 888 nt12.07□□□□□ -0.48
CWP1P28319 MOT3YMR070W 1473 nt12.02□□□□□ -0.48
CWP1P28319 FIS1YIL065C 468 nt12.02□□□□□ -0.49
CWP1P28319 FPR4YLR449W 1179 nt12□□□□□ -0.49
CWP1P28319 TRM9YML014W 840 nt11.98□□□□□ -0.49
CWP1P28319 BSC6YOL137W 1494 nt11.96□□□□□ -0.49
CWP1P28319 PHO4YFR034C 939 nt11.94□□□□□ -0.5
CWP1P28319 FUN26YAL022C 1554 nt11.93□□□□□ -0.5
CWP1P28319 DSK2YMR276W 1122 nt11.88□□□□□ -0.51
CWP1P28319 CCT6YDR188W 1641 nt11.86□□□□□ -0.51
CWP1P28319 IMP2'YIL154C 1041 nt11.86□□□□□ -0.51
CWP1P28319 FMP45YDL222C 930 nt11.83□□□□□ -0.52
CWP1P28319 YLR154C-GYLR154C-G 150 nt11.82□□□□□ -0.52
CWP1P28319 YPR011CYPR011C 981 nt11.8□□□□□ -0.52
CWP1P28319 YLR236CYLR236C 324 nt11.79□□□□□ -0.52
CWP1P28319 YCH1YGR203W 447 nt11.76□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms