RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W MRPS18P42847 217 aa7.41□□□□□ -1.22
ABP1YCR088W NUP57P48837 541 aa7.41□□□□□ -1.22
ABP1YCR088W TOS2P50078 622 aa7.41□□□□□ -1.22
ABP1YCR088W FLC3P53121 802 aa7.41□□□□□ -1.22
ABP1YCR088W DUS1P53759 423 aaKnown RBP7.41□□□□□ -1.22
ABP1YCR088W RRP40Q08285 240 aaKnown RBP7.41□□□□□ -1.22
ABP1YCR088W YDL176WQ12027 708 aa7.41□□□□□ -1.22
ABP1YCR088W ATG41Q12048 136 aa7.41□□□□□ -1.22
ABP1YCR088W SPC3Q12133 184 aa7.41□□□□□ -1.22
ABP1YCR088W YOL114CQ12322 202 aa7.41□□□□□ -1.22
ABP1YCR088W YPR015CQ12531 247 aa7.41□□□□□ -1.22
ABP1YCR088W MOD5P07884 428 aa7.41□□□□□ -1.22
ABP1YCR088W YKL151CP36059 337 aa7.41□□□□□ -1.22
ABP1YCR088W RGA1P39083 1007 aa7.41□□□□□ -1.22
ABP1YCR088W PZF1P39933 429 aa7.41□□□□□ -1.22
ABP1YCR088W YTA6P40328 754 aa7.41□□□□□ -1.22
ABP1YCR088W YIL165CP40446 119 aa7.41□□□□□ -1.22
ABP1YCR088W CIN1P40987 1014 aa7.41□□□□□ -1.22
ABP1YCR088W BNA6P43619 295 aa7.41□□□□□ -1.22
ABP1YCR088W RHO4Q00246 291 aa7.41□□□□□ -1.22
ABP1YCR088W NUP116Q02630 1113 aa7.41□□□□□ -1.22
ABP1YCR088W SUL2Q12325 893 aa7.41□□□□□ -1.22
ABP1YCR088W YLR099W-AQ3E798 87 aa7.41□□□□□ -1.22
ABP1YCR088W MTR10Q99189 972 aa7.41□□□□□ -1.22
ABP1YCR088W RPA135P22138 1203 aaKnown RBP7.4□□□□□ -1.23
ABP1YCR088W PRE7P23724 241 aaKnown RBP7.4□□□□□ -1.23
ABP1YCR088W CDC12P32468 407 aaKnown RBP7.4□□□□□ -1.23
ABP1YCR088W TMA19P35691 167 aaKnown RBP7.4□□□□□ -1.23
ABP1YCR088W CCT6P39079 546 aa7.4□□□□□ -1.23
ABP1YCR088W GID8P40208 455 aa7.4□□□□□ -1.23
ABP1YCR088W YFR018CP43599 363 aa7.4□□□□□ -1.23
ABP1YCR088W YJL049WP47048 450 aa7.4□□□□□ -1.23
ABP1YCR088W NPY1P53164 384 aa7.4□□□□□ -1.23
ABP1YCR088W AIM36Q03798 255 aa7.4□□□□□ -1.23
ABP1YCR088W PLM2Q04383 521 aa7.4□□□□□ -1.23
ABP1YCR088W YMR310CQ04867 317 aaPredicted RBP7.4□□□□□ -1.23
ABP1YCR088W URK1P27515 501 aa7.39□□□□□ -1.23
ABP1YCR088W PRE4P30657 266 aa7.39□□□□□ -1.23
ABP1YCR088W PTH1P38876 190 aaKnown RBP7.39□□□□□ -1.23
ABP1YCR088W PET100P38958 111 aa7.39□□□□□ -1.23
ABP1YCR088W TED1P40533 473 aa7.39□□□□□ -1.23
ABP1YCR088W TIR3P40552 269 aa7.39□□□□□ -1.23
ABP1YCR088W MAD2P40958 196 aa7.39□□□□□ -1.23
ABP1YCR088W GNP1P48813 663 aa7.39□□□□□ -1.23
ABP1YCR088W UBC9P50623 157 aaPredicted RBP7.39□□□□□ -1.23
ABP1YCR088W PPT1P53043 513 aa7.39□□□□□ -1.23
ABP1YCR088W HOS2P53096 452 aaPredicted RBP7.39□□□□□ -1.23
ABP1YCR088W PGA1P53896 198 aa7.39□□□□□ -1.23
ABP1YCR088W TDA1Q03533 586 aa7.39□□□□□ -1.23
ABP1YCR088W YMR252CQ04814 134 aa7.39□□□□□ -1.23
ABP1YCR088W ROY1Q04847 553 aa7.39□□□□□ -1.23
ABP1YCR088W ARV1Q06541 321 aa7.39□□□□□ -1.23
ABP1YCR088W PCL9Q12477 304 aa7.39□□□□□ -1.23
ABP1YCR088W SFG1Q12507 346 aa7.39□□□□□ -1.23
ABP1YCR088W YGL194C-AQ2V2P6 80 aa7.39□□□□□ -1.23
ABP1YCR088W YDL007C-AQ2V2Q0 85 aa7.39□□□□□ -1.23
ABP1YCR088W PNO1Q99216 274 aaKnown RBP7.39□□□□□ -1.23
ABP1YCR088W STE7P06784 515 aa7.38□□□□□ -1.23
ABP1YCR088W YOL163WP0CF20 169 aa7.38□□□□□ -1.23
ABP1YCR088W HCM1P25364 564 aa7.38□□□□□ -1.23
ABP1YCR088W HTD2P38790 280 aaKnown RBP7.38□□□□□ -1.23
ABP1YCR088W MSS4P38994 779 aa7.38□□□□□ -1.23
ABP1YCR088W SER3P40054 469 aa7.38□□□□□ -1.23
ABP1YCR088W YNL195CP40168 261 aa7.38□□□□□ -1.23
ABP1YCR088W YJL068CP40363 299 aa7.38□□□□□ -1.23
ABP1YCR088W APS3P47064 194 aa7.38□□□□□ -1.23
ABP1YCR088W BAT2P47176 376 aaKnown RBP7.38□□□□□ -1.23
ABP1YCR088W MAL11P53048 616 aa7.38□□□□□ -1.23
ABP1YCR088W HLR1Q04429 423 aa7.38□□□□□ -1.23
ABP1YCR088W RRP9Q06506 573 aaKnown RBP7.38□□□□□ -1.23
ABP1YCR088W TFB4Q12004 338 aa7.38□□□□□ -1.23
ABP1YCR088W ATP14Q12349 124 aa7.38□□□□□ -1.23
ABP1YCR088W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
ABP1YCR088W PEP4P07267 405 aaKnown RBP7.38□□□□□ -1.23
ABP1YCR088W YOL162WP0CF19 215 aa7.38□□□□□ -1.23
ABP1YCR088W PRP2P20095 876 aaPredicted RBP7.38□□□□□ -1.23
ABP1YCR088W AGP1P25376 633 aa7.38□□□□□ -1.23
ABP1YCR088W TAF14P35189 244 aa7.38□□□□□ -1.23
ABP1YCR088W RPS20P38701 121 aaKnown RBP7.38□□□□□ -1.23
ABP1YCR088W CHL4P38907 458 aa7.38□□□□□ -1.23
ABP1YCR088W PTC2P39966 464 aaKnown RBP7.38□□□□□ -1.23
ABP1YCR088W FMP52P40008 231 aa7.38□□□□□ -1.23
ABP1YCR088W SPT20P50875 604 aa7.38□□□□□ -1.23
ABP1YCR088W TUB4P53378 473 aa7.38□□□□□ -1.23
ABP1YCR088W MNT4P53745 580 aa7.38□□□□□ -1.23
ABP1YCR088W YPL068CQ02749 293 aa7.38□□□□□ -1.23
ABP1YCR088W YLR283WQ05867 314 aa7.38□□□□□ -1.23
ABP1YCR088W YLR224WQ05947 369 aa7.38□□□□□ -1.23
ABP1YCR088W CRT10Q08226 957 aa7.38□□□□□ -1.23
ABP1YCR088W PFA4Q12006 378 aa7.38□□□□□ -1.23
ABP1YCR088W RKM5Q12367 367 aa7.38□□□□□ -1.23
ABP1YCR088W YLR111WQ12528 110 aa7.38□□□□□ -1.23
ABP1YCR088W RRP12Q12754 1228 aaKnown RBP7.38□□□□□ -1.23
ABP1YCR088W MSB2P32334 1306 aa7.38□□□□□ -1.23
ABP1YCR088W CDC9P04819 755 aa7.37□□□□□ -1.23
ABP1YCR088W KIN28P06242 306 aa7.37□□□□□ -1.23
ABP1YCR088W HIS3P06633 220 aa7.37□□□□□ -1.23
ABP1YCR088W YKR104WP0CE69 306 aa7.37□□□□□ -1.23
ABP1YCR088W BAR1P12630 587 aa7.37□□□□□ -1.23
ABP1YCR088W FUN26P31381 517 aa7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms