Protein–RNA interactions for Protein: P53896

PGA1, GPI mannosyltransferase 2 subunit PGA1, yeastyeast

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGA1P53896 NSR1YGR159C 1245 nt18.37■□□□□ 0.53
PGA1P53896 YML009W-BYML009W-B 477 nt18.22■□□□□ 0.51
PGA1P53896 NOP1YDL014W 984 nt17.58■□□□□ 0.4
PGA1P53896 MDJ1YFL016C 1536 nt16.6■□□□□ 0.25
PGA1P53896 YKL036CYKL036C 393 nt15.95■□□□□ 0.14
PGA1P53896 SRX1YKL086W 384 nt15.37■□□□□ 0.05
PGA1P53896 Q0297Q0297 156 nt15.31■□□□□ 0.04
PGA1P53896 YJL027CYJL027C 417 nt15.28■□□□□ 0.04
PGA1P53896 DBP2YNL112W 1641 nt14.59□□□□□ -0.07
PGA1P53896 YCR051WYCR051W 669 nt14.55□□□□□ -0.08
PGA1P53896 SCS3YGL126W 1143 nt14.37□□□□□ -0.11
PGA1P53896 YBR190WYBR190W 312 nt14.23□□□□□ -0.13
PGA1P53896 TRN1tP(UGG)A 72 nt14.09□□□□□ -0.15
PGA1P53896 SUF9tP(UGG)F 72 nt14.09□□□□□ -0.15
PGA1P53896 SUF8tP(UGG)H 72 nt14.09□□□□□ -0.15
PGA1P53896 tP(UGG)LtP(UGG)L 72 nt14.09□□□□□ -0.15
PGA1P53896 SUF7tP(UGG)M 72 nt14.09□□□□□ -0.15
PGA1P53896 tP(UGG)N1tP(UGG)N1 72 nt14.09□□□□□ -0.15
PGA1P53896 tP(UGG)N2tP(UGG)N2 72 nt14.09□□□□□ -0.15
PGA1P53896 tP(UGG)O1tP(UGG)O1 72 nt14.09□□□□□ -0.15
PGA1P53896 SUF11tP(UGG)O2 72 nt14.09□□□□□ -0.15
PGA1P53896 CCC1YLR220W 969 nt13.92□□□□□ -0.18
PGA1P53896 RTC3YHR087W 336 nt13.88□□□□□ -0.19
PGA1P53896 YOL085CYOL085C 342 nt13.84□□□□□ -0.19
PGA1P53896 RPP1BYDL130W 321 nt13.74□□□□□ -0.21
PGA1P53896 PKP1YIL042C 1185 nt13.66□□□□□ -0.22
PGA1P53896 RVS167YDR388W 1449 nt13.6□□□□□ -0.23
PGA1P53896 SCJ1YMR214W 1134 nt13.52□□□□□ -0.25
PGA1P53896 tP(UGG)O3tP(UGG)O3 72 nt13.22□□□□□ -0.29
PGA1P53896 PET122YER153C 765 nt13.17□□□□□ -0.3
PGA1P53896 PUT4YOR348C 1884 nt13.16□□□□□ -0.3
PGA1P53896 SHR5YOL110W 714 nt13.08□□□□□ -0.32
PGA1P53896 SSA3YBL075C 1950 nt13□□□□□ -0.33
PGA1P53896 SCR1SCR1 522 nt12.91□□□□□ -0.34
PGA1P53896 URN1YPR152C 1398 nt12.9□□□□□ -0.34
PGA1P53896 ARE1YCR048W 1833 nt12.83□□□□□ -0.35
PGA1P53896 DEP1YAL013W 1218 nt12.8□□□□□ -0.36
PGA1P53896 YDJ1YNL064C 1230 nt12.8□□□□□ -0.36
PGA1P53896 OPI9YLR338W 858 nt12.78□□□□□ -0.36
PGA1P53896 SAH1YER043C 1350 nt12.78□□□□□ -0.36
PGA1P53896 ATS1YAL020C 1002 nt12.77□□□□□ -0.37
PGA1P53896 RRN5YLR141W 1092 nt12.75□□□□□ -0.37
PGA1P53896 POA1YBR022W 534 nt12.71□□□□□ -0.37
PGA1P53896 YHR049C-AYHR049C-A 297 nt12.66□□□□□ -0.38
PGA1P53896 RPN10YHR200W 807 nt12.63□□□□□ -0.39
PGA1P53896 YNL208WYNL208W 600 nt12.57□□□□□ -0.4
PGA1P53896 GAR1YHR089C 618 nt12.55□□□□□ -0.4
PGA1P53896 BSC6YOL137W 1494 nt12.51□□□□□ -0.41
PGA1P53896 YER088W-BYER088W-B 147 nt12.5□□□□□ -0.41
PGA1P53896 PUN1YLR414C 792 nt12.39□□□□□ -0.43
PGA1P53896 RSB1YOR049C 1065 nt12.38□□□□□ -0.43
PGA1P53896 BUD23YCR047C 828 nt12.33□□□□□ -0.44
PGA1P53896 PTC2YER089C 1395 nt12.3□□□□□ -0.44
PGA1P53896 YJR018WYJR018W 363 nt12.28□□□□□ -0.44
PGA1P53896 NAB2YGL122C 1578 nt12.18□□□□□ -0.46
PGA1P53896 SPT5YML010W 3192 nt12.17□□□□□ -0.46
PGA1P53896 TIR1YER011W 765 nt12.15□□□□□ -0.46
PGA1P53896 SSA1YAL005C 1929 nt12.07□□□□□ -0.48
PGA1P53896 YJR120WYJR120W 351 nt12.07□□□□□ -0.48
PGA1P53896 FIS1YIL065C 468 nt12□□□□□ -0.49
PGA1P53896 DAL1YIR027C 1383 nt11.97□□□□□ -0.49
PGA1P53896 RPP2BYDR382W 333 nt11.93□□□□□ -0.5
PGA1P53896 FPR4YLR449W 1179 nt11.91□□□□□ -0.5
PGA1P53896 PST2YDR032C 597 nt11.89□□□□□ -0.51
PGA1P53896 INM2YDR287W 879 nt11.88□□□□□ -0.51
PGA1P53896 PHO4YFR034C 939 nt11.86□□□□□ -0.51
PGA1P53896 SSA4YER103W 1929 nt11.84□□□□□ -0.51
PGA1P53896 SRB2YHR041C 633 nt11.84□□□□□ -0.51
PGA1P53896 MEP2YNL142W 1500 nt11.76□□□□□ -0.53
PGA1P53896 YPS1YLR120C 1710 nt11.73□□□□□ -0.53
PGA1P53896 YBL100CYBL100C 315 nt11.72□□□□□ -0.53
PGA1P53896 BDH2YAL061W 1254 nt11.67□□□□□ -0.54
PGA1P53896 YDR095CYDR095C 411 nt11.62□□□□□ -0.55
PGA1P53896 YHR165W-AYHR165W-A 312 nt11.61□□□□□ -0.55
PGA1P53896 DCW1YKL046C 1350 nt11.59□□□□□ -0.55
PGA1P53896 FUN26YAL022C 1554 nt11.58□□□□□ -0.56
PGA1P53896 WWM1YFL010C 636 nt11.57□□□□□ -0.56
PGA1P53896 TRM9YML014W 840 nt11.49□□□□□ -0.57
PGA1P53896 SHU1YHL006C 453 nt11.47□□□□□ -0.57
PGA1P53896 LSM3YLR438C-A 270 nt11.47□□□□□ -0.57
PGA1P53896 ALF1YNL148C 765 nt11.45□□□□□ -0.58
PGA1P53896 BDF1YLR399C 2061 nt11.42□□□□□ -0.58
PGA1P53896 EMI2YDR516C 1503 nt11.42□□□□□ -0.58
PGA1P53896 PTP1YDL230W 1008 nt11.41□□□□□ -0.58
PGA1P53896 CCT6YDR188W 1641 nt11.4□□□□□ -0.58
PGA1P53896 YGR021WYGR021W 873 nt11.39□□□□□ -0.59
PGA1P53896 RPP2AYOL039W 321 nt11.39□□□□□ -0.59
PGA1P53896 YFL021C-AYFL021C-A 855 nt11.38□□□□□ -0.59
PGA1P53896 YAL037C-BYAL037C-B 975 nt11.38□□□□□ -0.59
PGA1P53896 HOM6YJR139C 1080 nt11.36□□□□□ -0.59
PGA1P53896 CAC2YML102W 1407 nt11.35□□□□□ -0.59
PGA1P53896 YMR090WYMR090W 684 nt11.34□□□□□ -0.59
PGA1P53896 YDL221WYDL221W 552 nt11.32□□□□□ -0.6
PGA1P53896 SIS1YNL007C 1059 nt11.32□□□□□ -0.6
PGA1P53896 YBR220CYBR220C 1683 nt11.32□□□□□ -0.6
PGA1P53896 SUF2tP(AGG)C 72 nt11.31□□□□□ -0.6
PGA1P53896 SUF10tP(AGG)N 72 nt11.31□□□□□ -0.6
PGA1P53896 TAT1YBR069C 1860 nt11.27□□□□□ -0.61
PGA1P53896 MNP1YGL068W 585 nt11.26□□□□□ -0.61
PGA1P53896 YKL097CYKL097C 411 nt11.24□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms