RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C ODC1Q03028 310 aa2.17□□□□□ -2.06
PRP6YBR055C COQ11Q05892 277 aa2.17□□□□□ -2.06
PRP6YBR055C YEH2Q07950 538 aa2.17□□□□□ -2.06
PRP6YBR055C APC5Q08683 685 aa2.17□□□□□ -2.06
PRP6YBR055C TY3A-GQ12173 290 aa2.17□□□□□ -2.06
PRP6YBR055C LDB17Q12342 491 aa2.17□□□□□ -2.06
PRP6YBR055C FMP16Q12497 93 aa2.17□□□□□ -2.06
PRP6YBR055C TY3A-IQ99219 290 aa2.17□□□□□ -2.06
PRP6YBR055C MDM10P18409 493 aa2.17□□□□□ -2.06
PRP6YBR055C GLN3P18494 730 aa2.17□□□□□ -2.06
PRP6YBR055C MXR2P25566 168 aa2.17□□□□□ -2.06
PRP6YBR055C DEG1P31115 442 aaKnown RBP2.17□□□□□ -2.06
PRP6YBR055C HXT1P32465 570 aa2.17□□□□□ -2.06
PRP6YBR055C GLC7P32598 312 aaKnown RBP2.17□□□□□ -2.06
PRP6YBR055C YMR262WP38430 313 aa2.17□□□□□ -2.06
PRP6YBR055C FAA2P39518 744 aa2.17□□□□□ -2.06
PRP6YBR055C DSE1P40077 573 aa2.17□□□□□ -2.06
PRP6YBR055C YGR168CP53293 376 aa2.17□□□□□ -2.06
PRP6YBR055C LSC1P53598 329 aaKnown RBP2.17□□□□□ -2.06
PRP6YBR055C RPL15BP54780 204 aaPredicted RBP2.17□□□□□ -2.06
PRP6YBR055C TLG1Q03322 224 aa2.17□□□□□ -2.06
PRP6YBR055C APC4Q04601 652 aa2.17□□□□□ -2.06
PRP6YBR055C NAT4Q04751 285 aa2.17□□□□□ -2.06
PRP6YBR055C YLL007CQ07799 665 aa2.17□□□□□ -2.06
PRP6YBR055C YOL075CQ08234 1294 aa2.17□□□□□ -2.06
PRP6YBR055C DNL4Q08387 944 aaPredicted RBP2.17□□□□□ -2.06
PRP6YBR055C YOP1Q12402 180 aa2.17□□□□□ -2.06
PRP6YBR055C YOR338WQ99326 363 aa2.17□□□□□ -2.06
PRP6YBR055C CHC1P22137 1653 aaKnown RBP2.17□□□□□ -2.06
PRP6YBR055C DNF3Q12674 1656 aa2.16□□□□□ -2.06
PRP6YBR055C YER190C-BP0CX94 160 aa2.16□□□□□ -2.06
PRP6YBR055C YEL077W-AP0CX95 160 aa2.16□□□□□ -2.06
PRP6YBR055C YGR296C-BP0CX96 160 aa2.16□□□□□ -2.06
PRP6YBR055C YPL283W-BP0CX97 160 aa2.16□□□□□ -2.06
PRP6YBR055C YPR204C-AP0CX98 160 aa2.16□□□□□ -2.06
PRP6YBR055C AIM17P23180 465 aaKnown RBP2.16□□□□□ -2.06
PRP6YBR055C YCR022CP25620 114 aa2.16□□□□□ -2.06
PRP6YBR055C MNS1P32906 549 aa2.16□□□□□ -2.06
PRP6YBR055C RPT5P33297 434 aaKnown RBP2.16□□□□□ -2.06
PRP6YBR055C ECT1P33412 323 aa2.16□□□□□ -2.06
PRP6YBR055C SKT5P34226 696 aa2.16□□□□□ -2.06
PRP6YBR055C RPC25P35718 212 aa2.16□□□□□ -2.06
PRP6YBR055C MYO3P36006 1272 aa2.16□□□□□ -2.06
PRP6YBR055C PCL6P40038 420 aa2.16□□□□□ -2.06
PRP6YBR055C LOH1P47055 219 aa2.16□□□□□ -2.06
PRP6YBR055C LIA1P47120 325 aaKnown RBP2.16□□□□□ -2.06
PRP6YBR055C AZR1P50080 613 aa2.16□□□□□ -2.06
PRP6YBR055C YGR117CP53270 476 aa2.16□□□□□ -2.06
PRP6YBR055C YPL199CQ08954 240 aa2.16□□□□□ -2.06
PRP6YBR055C POM152P39685 1337 aa2.16□□□□□ -2.06
PRP6YBR055C TOP2P06786 1428 aaKnown RBP2.16□□□□□ -2.06
PRP6YBR055C MMS22Q06164 1454 aa2.16□□□□□ -2.06
PRP6YBR055C GDH1P07262 454 aaKnown RBP2.16□□□□□ -2.06
PRP6YBR055C MAS2P11914 482 aa2.16□□□□□ -2.06
PRP6YBR055C SLY1P22213 666 aa2.16□□□□□ -2.06
PRP6YBR055C ZUO1P32527 433 aaKnown RBP2.16□□□□□ -2.06
PRP6YBR055C TRS65P32893 560 aa2.16□□□□□ -2.06
PRP6YBR055C PTR2P32901 601 aa2.16□□□□□ -2.06
PRP6YBR055C LOS1P33418 1100 aaPredicted RBP2.16□□□□□ -2.06
PRP6YBR055C MRPS5P33759 307 aa2.16□□□□□ -2.06
PRP6YBR055C HAT2P39984 401 aa2.16□□□□□ -2.06
PRP6YBR055C SHO1P40073 367 aa2.16□□□□□ -2.06
PRP6YBR055C BTT1P40314 149 aaPredicted RBP2.16□□□□□ -2.06
PRP6YBR055C YNL260CP53846 198 aa2.16□□□□□ -2.06
PRP6YBR055C PIR3Q03180 325 aa2.16□□□□□ -2.06
PRP6YBR055C CWC21Q03375 135 aaKnown RBP2.16□□□□□ -2.06
PRP6YBR055C YMR254CQ04838 102 aa2.16□□□□□ -2.06
PRP6YBR055C CDC42P19073 191 aa2.15□□□□□ -2.06
PRP6YBR055C GPI12P23797 304 aa2.15□□□□□ -2.06
PRP6YBR055C CSM1P25651 190 aa2.15□□□□□ -2.06
PRP6YBR055C TOA2P32774 122 aa2.15□□□□□ -2.06
PRP6YBR055C HSM3P38348 480 aa2.15□□□□□ -2.06
PRP6YBR055C SCC4P40090 624 aa2.15□□□□□ -2.06
PRP6YBR055C YMR134WP40207 237 aa2.15□□□□□ -2.06
PRP6YBR055C XBP1P40489 647 aa2.15□□□□□ -2.06
PRP6YBR055C UTP25P40498 721 aaKnown RBP2.15□□□□□ -2.06
PRP6YBR055C YIR014WP40570 242 aa2.15□□□□□ -2.06
PRP6YBR055C SEC27P41811 889 aaKnown RBP2.15□□□□□ -2.06
PRP6YBR055C PSA1P41940 361 aaKnown RBP2.15□□□□□ -2.06
PRP6YBR055C MDV1P47025 714 aa2.15□□□□□ -2.06
PRP6YBR055C IKS1P47042 667 aa2.15□□□□□ -2.06
PRP6YBR055C SSN8P47821 323 aa2.15□□□□□ -2.06
PRP6YBR055C LSB1P53281 241 aa2.15□□□□□ -2.06
PRP6YBR055C RRN9P53437 365 aa2.15□□□□□ -2.06
PRP6YBR055C STP1Q00947 519 aa2.15□□□□□ -2.06
PRP6YBR055C CCE1Q03702 353 aa2.15□□□□□ -2.06
PRP6YBR055C RRN11Q04712 507 aa2.15□□□□□ -2.06
PRP6YBR055C SHS1Q07657 551 aa2.15□□□□□ -2.06
PRP6YBR055C NUP159P40477 1460 aa2.15□□□□□ -2.06
PRP6YBR055C RAD7P06779 565 aa2.15□□□□□ -2.07
PRP6YBR055C SSC1P0CS90 654 aaKnown RBP2.15□□□□□ -2.07
PRP6YBR055C CAP2P13517 287 aa2.15□□□□□ -2.07
PRP6YBR055C RSR1P13856 272 aa2.15□□□□□ -2.07
PRP6YBR055C MRPL8P22353 238 aa2.15□□□□□ -2.07
PRP6YBR055C EXG1P23776 448 aaKnown RBP2.15□□□□□ -2.07
PRP6YBR055C MRP4P32902 394 aa2.15□□□□□ -2.07
PRP6YBR055C COY1P34237 679 aa2.15□□□□□ -2.07
PRP6YBR055C GEP4P38812 185 aa2.15□□□□□ -2.07
PRP6YBR055C ATG7P38862 630 aa2.15□□□□□ -2.07
PRP6YBR055C BFR1P38934 470 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms