RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C DRS1P32892 752 aaKnown RBP6.25□□□□□ -1.41
PRP6YBR055C MTC1P47018 478 aaKnown RBP5.8□□□□□ -1.48
PRP6YBR055C BFR2Q06631 534 aaKnown RBP5.58□□□□□ -1.52
PRP6YBR055C TFA1P36100 482 aa5.47□□□□□ -1.53
PRP6YBR055C AVT3P36062 692 aa5.18□□□□□ -1.58
PRP6YBR055C DIP2Q12220 943 aaPredicted RBP5.17□□□□□ -1.58
PRP6YBR055C RQC2Q12532 1038 aaKnown RBP5.06□□□□□ -1.6
PRP6YBR055C RSE1Q04693 1361 aaKnown RBP4.77□□□□□ -1.65
PRP6YBR055C DMA1P38823 416 aa4.7□□□□□ -1.66
PRP6YBR055C ISW2Q08773 1120 aa4.63□□□□□ -1.67
PRP6YBR055C TAF7Q05021 590 aa4.62□□□□□ -1.67
PRP6YBR055C RPL17AP05740 184 aaKnown RBP4.59□□□□□ -1.67
PRP6YBR055C RPL17BP46990 184 aaKnown RBP4.59□□□□□ -1.67
PRP6YBR055C PTP3P40048 928 aa4.58□□□□□ -1.68
PRP6YBR055C RPG1P38249 964 aaKnown RBP4.57□□□□□ -1.68
PRP6YBR055C REB1P21538 810 aa4.5□□□□□ -1.69
PRP6YBR055C RIM101P33400 625 aa4.43□□□□□ -1.7
PRP6YBR055C LEO1P38439 464 aa4.43□□□□□ -1.7
PRP6YBR055C SSP1P38871 571 aa4.43□□□□□ -1.7
PRP6YBR055C PRI1P10363 409 aa4.42□□□□□ -1.7
PRP6YBR055C SPT21P35209 758 aa4.41□□□□□ -1.7
PRP6YBR055C FAP1P53971 965 aa4.36□□□□□ -1.71
PRP6YBR055C YAH1Q12184 172 aaKnown RBP4.36□□□□□ -1.71
PRP6YBR055C OXP1P28273 1286 aa4.32□□□□□ -1.72
PRP6YBR055C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
PRP6YBR055C AAD16Q02895 342 aa4.3□□□□□ -1.72
PRP6YBR055C LEU3P08638 886 aa4.28□□□□□ -1.72
PRP6YBR055C YIL055CP40523 627 aaKnown RBP4.28□□□□□ -1.72
PRP6YBR055C YLR271WQ06152 274 aa4.27□□□□□ -1.73
PRP6YBR055C TSR3Q12094 313 aaKnown RBP4.26□□□□□ -1.73
PRP6YBR055C SAS10Q12136 610 aaPredicted RBP4.26□□□□□ -1.73
PRP6YBR055C MGA2P40578 1113 aa4.22□□□□□ -1.73
PRP6YBR055C RSM7P47150 247 aa4.19□□□□□ -1.74
PRP6YBR055C YKR023WP36119 530 aaKnown RBP4.19□□□□□ -1.74
PRP6YBR055C CST9Q06032 482 aa4.17□□□□□ -1.74
PRP6YBR055C DMA2P53924 522 aa4.15□□□□□ -1.75
PRP6YBR055C RPN1P38764 993 aaKnown RBP4.14□□□□□ -1.75
PRP6YBR055C HOP09932 586 aa4.14□□□□□ -1.75
PRP6YBR055C DCD1P06773 312 aa4.1□□□□□ -1.75
PRP6YBR055C TFC8Q12308 588 aa4.1□□□□□ -1.75
PRP6YBR055C AI2P03876 854 aa4.09□□□□□ -1.75
PRP6YBR055C PSD2P53037 1138 aaKnown RBP4.09□□□□□ -1.75
PRP6YBR055C SPB4P25808 606 aaPredicted RBP4.09□□□□□ -1.75
PRP6YBR055C MRPL32P25348 183 aa4.08□□□□□ -1.76
PRP6YBR055C RAM2P29703 316 aa4.06□□□□□ -1.76
PRP6YBR055C VPS70P47161 811 aa4.06□□□□□ -1.76
PRP6YBR055C SET1P38827 1080 aaKnown RBP4.06□□□□□ -1.76
PRP6YBR055C PRY3P47033 881 aa4.05□□□□□ -1.76
PRP6YBR055C CKB1P43639 278 aa4.04□□□□□ -1.76
PRP6YBR055C BBC1P47068 1157 aa4.04□□□□□ -1.76
PRP6YBR055C ABP1P15891 592 aaKnown RBP4.03□□□□□ -1.76
PRP6YBR055C CDC27P38042 758 aa4.02□□□□□ -1.77
PRP6YBR055C YPR148CQ06523 435 aa4.02□□□□□ -1.77
PRP6YBR055C RLF2Q12495 606 aa4.02□□□□□ -1.77
PRP6YBR055C MRM1P25270 412 aa4.01□□□□□ -1.77
PRP6YBR055C BCH2P36122 765 aa4□□□□□ -1.77
PRP6YBR055C RCR1P38212 213 aa4□□□□□ -1.77
PRP6YBR055C IFH1P39520 1085 aa4□□□□□ -1.77
PRP6YBR055C EPS1P40557 701 aa3.97□□□□□ -1.77
PRP6YBR055C PBS2P08018 668 aa3.96□□□□□ -1.78
PRP6YBR055C KIN1P13185 1064 aa3.96□□□□□ -1.78
PRP6YBR055C RTG3P38165 486 aa3.95□□□□□ -1.78
PRP6YBR055C DSF2P38213 736 aa3.95□□□□□ -1.78
PRP6YBR055C MAK11P20484 414 aaKnown RBP3.94□□□□□ -1.78
PRP6YBR055C YNR021WP53723 404 aaKnown RBP3.94□□□□□ -1.78
PRP6YBR055C GLC3P32775 704 aa3.93□□□□□ -1.78
PRP6YBR055C BDF1P35817 686 aa3.92□□□□□ -1.78
PRP6YBR055C MAM3Q12296 706 aa3.91□□□□□ -1.78
PRP6YBR055C IES2P40154 320 aa3.91□□□□□ -1.78
PRP6YBR055C HGH1P48362 394 aaKnown RBP3.91□□□□□ -1.78
PRP6YBR055C COQ8P27697 501 aa3.9□□□□□ -1.78
PRP6YBR055C AIM7Q12156 149 aa3.88□□□□□ -1.79
PRP6YBR055C SCY1P53009 804 aa3.88□□□□□ -1.79
PRP6YBR055C DIT2P21595 489 aa3.87□□□□□ -1.79
PRP6YBR055C REF2P42073 533 aaPredicted RBP3.87□□□□□ -1.79
PRP6YBR055C VPS29P38759 282 aa3.87□□□□□ -1.79
PRP6YBR055C MIF2P35201 549 aa3.86□□□□□ -1.79
PRP6YBR055C GUA1P38625 525 aaKnown RBP3.86□□□□□ -1.79
PRP6YBR055C NUP42P49686 430 aaKnown RBP3.86□□□□□ -1.79
PRP6YBR055C EDS1P38073 919 aa3.84□□□□□ -1.79
PRP6YBR055C ATF2P53296 535 aa3.84□□□□□ -1.79
PRP6YBR055C MAK21Q12176 1025 aaKnown RBP3.83□□□□□ -1.8
PRP6YBR055C NOP53Q12080 455 aaKnown RBP3.83□□□□□ -1.8
PRP6YBR055C YFR006WP43590 535 aa3.82□□□□□ -1.8
PRP6YBR055C YMR1P47147 688 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
PRP6YBR055C STS1P38637 319 aa3.81□□□□□ -1.8
PRP6YBR055C YCK3P39962 524 aa3.81□□□□□ -1.8
PRP6YBR055C TFB3Q03290 321 aa3.81□□□□□ -1.8
PRP6YBR055C COX6P00427 148 aa3.8□□□□□ -1.8
PRP6YBR055C MAP2P38174 421 aaKnown RBP3.8□□□□□ -1.8
PRP6YBR055C HAA1Q12753 694 aaKnown RBP3.8□□□□□ -1.8
PRP6YBR055C HPC2Q01448 625 aa3.8□□□□□ -1.8
PRP6YBR055C DBP1P24784 617 aaKnown RBP3.79□□□□□ -1.8
PRP6YBR055C PTC3P34221 468 aaKnown RBP3.78□□□□□ -1.8
PRP6YBR055C YML020WQ03722 664 aa3.78□□□□□ -1.8
PRP6YBR055C BRL1P38770 471 aa3.78□□□□□ -1.8
PRP6YBR055C VHR2P40041 505 aa3.78□□□□□ -1.8
PRP6YBR055C PKC1P24583 1151 aa3.77□□□□□ -1.81
PRP6YBR055C SLX5P32828 619 aaKnown RBP3.77□□□□□ -1.81
PRP6YBR055C UBP10P53874 792 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms