RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C MDH1P17505 334 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
SFB3YHR098C COX11P19516 300 aaKnown RBP5.43□□□□□ -1.54
SFB3YHR098C PRP2P20095 876 aaPredicted RBP5.43□□□□□ -1.54
SFB3YHR098C MNE1P24720 663 aa5.43□□□□□ -1.54
SFB3YHR098C BEM1P29366 551 aa5.43□□□□□ -1.54
SFB3YHR098C FRE2P36033 711 aa5.43□□□□□ -1.54
SFB3YHR098C YKR075CP36155 307 aa5.43□□□□□ -1.54
SFB3YHR098C YHR033WP38690 423 aa5.43□□□□□ -1.54
SFB3YHR098C GDI1P39958 451 aaKnown RBP5.43□□□□□ -1.54
SFB3YHR098C FIR1P40020 876 aa5.43□□□□□ -1.54
SFB3YHR098C MND2P40577 368 aa5.43□□□□□ -1.54
SFB3YHR098C RRT5P43607 289 aa5.43□□□□□ -1.54
SFB3YHR098C GTR2P53290 341 aa5.43□□□□□ -1.54
SFB3YHR098C GPN3Q06543 272 aa5.43□□□□□ -1.54
SFB3YHR098C LUC7Q07508 261 aaPredicted RBP5.43□□□□□ -1.54
SFB3YHR098C CYK3Q07533 885 aa5.43□□□□□ -1.54
SFB3YHR098C YLR049CQ12110 428 aa5.43□□□□□ -1.54
SFB3YHR098C YPR063CQ12160 140 aa5.43□□□□□ -1.54
SFB3YHR098C ENT1Q12518 454 aa5.43□□□□□ -1.54
SFB3YHR098C YCL001W-BQ96VH2 84 aa5.43□□□□□ -1.54
SFB3YHR098C ZWF1P11412 505 aaKnown RBP5.43□□□□□ -1.54
SFB3YHR098C DAL81P21657 970 aa5.43□□□□□ -1.54
SFB3YHR098C SGF29P25554 259 aa5.43□□□□□ -1.54
SFB3YHR098C VMA5P31412 392 aaKnown RBP5.43□□□□□ -1.54
SFB3YHR098C SCM4P32564 187 aa5.43□□□□□ -1.54
SFB3YHR098C ALG3P38179 458 aa5.43□□□□□ -1.54
SFB3YHR098C RRD1P40454 393 aaKnown RBP5.43□□□□□ -1.54
SFB3YHR098C RPL10P41805 221 aaKnown RBP5.43□□□□□ -1.54
SFB3YHR098C ATG18P43601 500 aa5.43□□□□□ -1.54
SFB3YHR098C NUP85P46673 744 aa5.43□□□□□ -1.54
SFB3YHR098C AIM22P47051 409 aa5.43□□□□□ -1.54
SFB3YHR098C ASN1P49089 572 aaKnown RBP5.43□□□□□ -1.54
SFB3YHR098C NCS6P53088 359 aa5.43□□□□□ -1.54
SFB3YHR098C MNT4P53745 580 aa5.43□□□□□ -1.54
SFB3YHR098C HXT11P54862 567 aa5.43□□□□□ -1.54
SFB3YHR098C NAM8Q00539 523 aaKnown RBP5.43□□□□□ -1.54
SFB3YHR098C NUP116Q02630 1113 aa5.43□□□□□ -1.54
SFB3YHR098C RIF2Q06208 395 aa5.43□□□□□ -1.54
SFB3YHR098C OPT2Q06593 877 aa5.43□□□□□ -1.54
SFB3YHR098C SWC7Q06707 132 aa5.43□□□□□ -1.54
SFB3YHR098C YPR091CQ06833 770 aa5.43□□□□□ -1.54
SFB3YHR098C ESC8Q08119 714 aa5.43□□□□□ -1.54
SFB3YHR098C YOL019WQ08157 551 aa5.43□□□□□ -1.54
SFB3YHR098C PSF3Q12146 194 aa5.43□□□□□ -1.54
SFB3YHR098C JLP1Q12358 412 aa5.43□□□□□ -1.54
SFB3YHR098C FUM1P08417 488 aaKnown RBP5.42□□□□□ -1.54
SFB3YHR098C YUR1P26725 428 aa5.42□□□□□ -1.54
SFB3YHR098C APM3P38153 483 aa5.42□□□□□ -1.54
SFB3YHR098C MUP3P38734 546 aa5.42□□□□□ -1.54
SFB3YHR098C RMD6P39975 231 aa5.42□□□□□ -1.54
SFB3YHR098C MXR1P40029 184 aa5.42□□□□□ -1.54
SFB3YHR098C SET4P42948 560 aa5.42□□□□□ -1.54
SFB3YHR098C SNN1P48232 102 aa5.42□□□□□ -1.54
SFB3YHR098C SEH1P53011 349 aaKnown RBP5.42□□□□□ -1.54
SFB3YHR098C STR3P53101 465 aaKnown RBP5.42□□□□□ -1.54
SFB3YHR098C CUL3P53202 744 aa5.42□□□□□ -1.54
SFB3YHR098C YDR387CQ04162 555 aa5.42□□□□□ -1.54
SFB3YHR098C CRD1Q07560 283 aa5.42□□□□□ -1.54
SFB3YHR098C RRT8Q08219 342 aa5.42□□□□□ -1.54
SFB3YHR098C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SFB3YHR098C ECM29P38737 1868 aa5.42□□□□□ -1.54
SFB3YHR098C TDH1P00360 332 aaKnown RBP5.42□□□□□ -1.54
SFB3YHR098C HOM2P13663 365 aaKnown RBP5.42□□□□□ -1.54
SFB3YHR098C SAM35P14693 329 aa5.42□□□□□ -1.54
SFB3YHR098C IDP1P21954 428 aaKnown RBP5.42□□□□□ -1.54
SFB3YHR098C NDC1P32500 655 aa5.42□□□□□ -1.54
SFB3YHR098C FLO10P36170 1169 aa5.42□□□□□ -1.54
SFB3YHR098C YBR284WP38150 797 aa5.42□□□□□ -1.54
SFB3YHR098C LYS9P38999 446 aa5.42□□□□□ -1.54
SFB3YHR098C UTP7P40055 554 aaKnown RBP5.42□□□□□ -1.54
SFB3YHR098C YMR144WP40214 342 aaKnown RBP5.42□□□□□ -1.54
SFB3YHR098C YJR030CP47101 745 aa5.42□□□□□ -1.54
SFB3YHR098C NBP35P52920 328 aa5.42□□□□□ -1.54
SFB3YHR098C DOC1P53068 250 aa5.42□□□□□ -1.54
SFB3YHR098C RSM27P53305 110 aa5.42□□□□□ -1.54
SFB3YHR098C OCA2P53949 197 aa5.42□□□□□ -1.54
SFB3YHR098C HLR1Q04429 423 aa5.42□□□□□ -1.54
SFB3YHR098C RNH1Q04740 348 aa5.42□□□□□ -1.54
SFB3YHR098C NDE2Q07500 545 aa5.42□□□□□ -1.54
SFB3YHR098C NRT1Q08485 598 aa5.42□□□□□ -1.54
SFB3YHR098C NBP2Q12163 236 aa5.42□□□□□ -1.54
SFB3YHR098C HRP1Q99383 534 aaKnown RBP5.42□□□□□ -1.54
SFB3YHR098C MET2P08465 486 aa5.41□□□□□ -1.54
SFB3YHR098C GUK1P15454 187 aaKnown RBP5.41□□□□□ -1.54
SFB3YHR098C KIN82P25341 720 aa5.41□□□□□ -1.54
SFB3YHR098C PER1P25625 357 aa5.41□□□□□ -1.54
SFB3YHR098C CAT2P32796 670 aaKnown RBP5.41□□□□□ -1.54
SFB3YHR098C SNU114P36048 1008 aaKnown RBP5.41□□□□□ -1.54
SFB3YHR098C MRPL36P36531 177 aa5.41□□□□□ -1.54
SFB3YHR098C NPR2P39923 615 aa5.41□□□□□ -1.54
SFB3YHR098C AFG3P39925 761 aa5.41□□□□□ -1.54
SFB3YHR098C YEL025CP39991 1188 aa5.41□□□□□ -1.54
SFB3YHR098C AGE2P40529 298 aa5.41□□□□□ -1.54
SFB3YHR098C YIR007WP40566 764 aa5.41□□□□□ -1.54
SFB3YHR098C SKP2P42843 763 aa5.41□□□□□ -1.54
SFB3YHR098C GZF3P42944 551 aaKnown RBP5.41□□□□□ -1.54
SFB3YHR098C RPE1P46969 238 aa5.41□□□□□ -1.54
SFB3YHR098C MCM22P47167 239 aa5.41□□□□□ -1.54
SFB3YHR098C PEX21P50091 288 aa5.41□□□□□ -1.54
SFB3YHR098C ERV29P53337 310 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms