RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	YLR456W	Q06199	204 aa		1.3	□□□□□ -2.2
SCW11	YGL028C	RRP9	Q06506	573 aa	Known RBP	1.3	□□□□□ -2.2
SCW11	YGL028C	VPS54	Q12071	889 aa		1.3	□□□□□ -2.2
SCW11	YGL028C	SPE3	Q12074	293 aa	Known RBP	1.3	□□□□□ -2.2
SCW11	YGL028C	TPT1	Q12272	230 aa	Known RBP	1.3	□□□□□ -2.2
SCW11	YGL028C	PHA2	P32452	334 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	PXA2	P34230	853 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	OLA1	P38219	394 aa	Known RBP	1.29	□□□□□ -2.2
SCW11	YGL028C	FAD1	P38913	306 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	YJR085C	P47131	105 aa	Known RBP	1.29	□□□□□ -2.2
SCW11	YGL028C	RHO5	P53879	331 aa	Known RBP	1.29	□□□□□ -2.2
SCW11	YGL028C	IGO1	P53897	168 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	VPS9	P54787	451 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	NDL1	Q06568	189 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	IRC25	Q07951	179 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	CUE5	Q08412	411 aa	Known RBP	1.29	□□□□□ -2.2
SCW11	YGL028C	RAX1	Q08760	435 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	AEP3	Q12089	606 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	SNU66	Q12420	587 aa	Predicted RBP	1.29	□□□□□ -2.2
SCW11	YGL028C	ALG1	P16661	449 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	HSP104	P31539	908 aa	Known RBP	1.29	□□□□□ -2.2
SCW11	YGL028C	RIM1	P32445	135 aa	Known RBP	1.29	□□□□□ -2.2
SCW11	YGL028C	CYS4	P32582	507 aa	Known RBP	1.29	□□□□□ -2.2
SCW11	YGL028C	RRP1	P35178	278 aa	Predicted RBP	1.29	□□□□□ -2.2
SCW11	YGL028C	STP2	P38704	541 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	GPI16	P38875	610 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	LCB2	P40970	561 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	GAB1	P41733	394 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	STD1	Q02794	444 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	MMT1	Q03218	510 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	PRP3	Q03338	469 aa	Predicted RBP	1.29	□□□□□ -2.2
SCW11	YGL028C	VHS1	Q03785	461 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	DCI1	Q08558	271 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	IES4	Q08561	116 aa		1.29	□□□□□ -2.2
SCW11	YGL028C	RPN5	Q12250	445 aa	Known RBP	1.29	□□□□□ -2.2
SCW11	YGL028C	RPL1A	P0CX43	217 aa	Known RBP	1.28	□□□□□ -2.2
SCW11	YGL028C	RPL1B	P0CX44	217 aa	Known RBP	1.28	□□□□□ -2.2
SCW11	YGL028C	YCL068C	P25593	260 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	POP5	P28005	173 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	CHK1	P38147	527 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	SBE22	P38814	852 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	UTP18	P40362	594 aa	Predicted RBP	1.28	□□□□□ -2.2
SCW11	YGL028C	EFM4	P40516	257 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	TOS2	P50078	622 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	CCE1	Q03702	353 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	MDM36	Q06820	579 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	NOP6	Q07623	225 aa	Known RBP	1.28	□□□□□ -2.2
SCW11	YGL028C	NSE1	Q07913	336 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	YPQ1	Q12010	308 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	RNH203	Q12338	110 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	YRM1	Q12340	786 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	AHC1	Q12433	566 aa		1.28	□□□□□ -2.2
SCW11	YGL028C	DST1	P07273	309 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	PRB1	P09232	635 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	CAP2	P13517	287 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	EXG1	P23776	448 aa	Known RBP	1.27	□□□□□ -2.21
SCW11	YGL028C	TOA2	P32774	122 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	MDL1	P33310	695 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	SKN1	P33336	771 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	PEX5	P35056	612 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	YBR056W	P38081	501 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	QDR3	P38227	689 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	INM1	P38710	295 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	MLH1	P38920	769 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	YER079W	P40052	210 aa	Known RBP	1.27	□□□□□ -2.21
SCW11	YGL028C	TOS3	P43637	560 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	MDE1	P47095	244 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	PMT5	P52867	743 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	ECM11	Q04110	302 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	GYL1	Q04322	720 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	NCA2	Q12374	616 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	CEX1	Q12453	761 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	PAR32	Q12515	295 aa	Known RBP	1.27	□□□□□ -2.21
SCW11	YGL028C	BI3	Q9ZZW7	517 aa		1.27	□□□□□ -2.21
SCW11	YGL028C	HSP82	P02829	709 aa	Known RBP	1.26	□□□□□ -2.21
SCW11	YGL028C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	1.26	□□□□□ -2.21	not detected
SCW11	YGL028C	CDC21	P06785	304 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	SSC1	P0CS90	654 aa	Known RBP	1.26	□□□□□ -2.21
SCW11	YGL028C	RPL12A	P0CX53	165 aa	Known RBP	1.26	□□□□□ -2.21
SCW11	YGL028C	RPL12B	P0CX54	165 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	MNE1	P24720	663 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	RRP7	P25368	297 aa	Predicted RBP	1.26	□□□□□ -2.21
SCW11	YGL028C	PUP2	P32379	260 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	DPH5	P32469	300 aa	Predicted RBP	1.26	□□□□□ -2.21
SCW11	YGL028C	YEF1	P32622	495 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	1.26	□□□□□ -2.21	not detected
SCW11	YGL028C	YSC83	P32792	385 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	CSE2	P33308	149 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	SKT5	P34226	696 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	BMT2	P38278	337 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	YHK8	P38776	514 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	PTI1	P39927	425 aa	Predicted RBP	1.26	□□□□□ -2.21
SCW11	YGL028C	YJL055W	P47044	245 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	STE24	P47154	453 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	ROG1	P53118	685 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	MLC1	P53141	149 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	RRN9	P53437	365 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	MEH1	Q02205	184 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	NUP116	Q02630	1113 aa		1.26	□□□□□ -2.21
SCW11	YGL028C	YDR541C	Q03049	344 aa		1.26	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms