RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W NDE2Q07500 545 aa3.77□□□□□ -1.81
VAM3YOR106W SRL2Q12020 392 aa3.77□□□□□ -1.81
VAM3YOR106W IZH2Q12442 317 aa3.77□□□□□ -1.81
VAM3YOR106W PGA3Q12746 312 aaKnown RBP3.77□□□□□ -1.81
VAM3YOR106W CDC31P06704 161 aaKnown RBP3.76□□□□□ -1.81
VAM3YOR106W HSP26P15992 214 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
VAM3YOR106W MRP21P38175 177 aa3.76□□□□□ -1.81
VAM3YOR106W RRN10P38204 145 aa3.76□□□□□ -1.81
VAM3YOR106W DIS3Q08162 1001 aaKnown RBP3.76□□□□□ -1.81
VAM3YOR106W SNU66Q12420 587 aaPredicted RBP3.76□□□□□ -1.81
VAM3YOR106W HOM3P10869 527 aa3.75□□□□□ -1.81
VAM3YOR106W GEX1P25596 615 aa3.75□□□□□ -1.81
VAM3YOR106W YBR056WP38081 501 aa3.75□□□□□ -1.81
VAM3YOR106W NOC2P39744 710 aaKnown RBP3.75□□□□□ -1.81
VAM3YOR106W YJR085CP47131 105 aaKnown RBP3.75□□□□□ -1.81
VAM3YOR106W MDM1Q01846 1127 aa3.75□□□□□ -1.81
VAM3YOR106W KAP120Q02932 1032 aa3.75□□□□□ -1.81
VAM3YOR106W YMR155WQ03795 547 aa3.75□□□□□ -1.81
VAM3YOR106W DON1Q05610 365 aa3.75□□□□□ -1.81
VAM3YOR106W JID1Q12350 301 aa3.75□□□□□ -1.81
VAM3YOR106W CHK1P38147 527 aa3.74□□□□□ -1.81
VAM3YOR106W NAB3P38996 802 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
VAM3YOR106W BUG1Q12191 341 aa3.74□□□□□ -1.81
VAM3YOR106W TPT1Q12272 230 aaKnown RBP3.74□□□□□ -1.81
VAM3YOR106W URA4P20051 364 aa3.73□□□□□ -1.81
VAM3YOR106W YCR051WP25631 222 aa3.73□□□□□ -1.81
VAM3YOR106W NFU1P32860 256 aa3.73□□□□□ -1.81
VAM3YOR106W MID2P36027 376 aa3.73□□□□□ -1.81
VAM3YOR106W RRP4P38792 359 aaKnown RBP3.73□□□□□ -1.81
VAM3YOR106W COX14P39103 70 aa3.73□□□□□ -1.81
VAM3YOR106W DFG10P40526 253 aa3.73□□□□□ -1.81
VAM3YOR106W PLP2Q12017 286 aa3.73□□□□□ -1.81
VAM3YOR106W ATG34Q12292 412 aa3.73□□□□□ -1.81
VAM3YOR106W SCM3Q12334 223 aa3.73□□□□□ -1.81
VAM3YOR106W FUR1P18562 216 aaKnown RBP3.72□□□□□ -1.81
VAM3YOR106W YCL068CP25593 260 aa3.72□□□□□ -1.81
VAM3YOR106W BRF1P29056 596 aa3.72□□□□□ -1.81
VAM3YOR106W RRP1P35178 278 aaPredicted RBP3.72□□□□□ -1.81
VAM3YOR106W MIG3P39943 394 aa3.72□□□□□ -1.81
VAM3YOR106W YMR130WQ04223 302 aa3.72□□□□□ -1.81
VAM3YOR106W ROY1Q04847 553 aa3.72□□□□□ -1.81
VAM3YOR106W RAX1Q08760 435 aa3.72□□□□□ -1.81
VAM3YOR106W AHC1Q12433 566 aa3.72□□□□□ -1.81
VAM3YOR106W RTC2P38279 296 aa3.71□□□□□ -1.82
VAM3YOR106W SBE22P38814 852 aa3.71□□□□□ -1.82
VAM3YOR106W SRB7P47822 140 aa3.71□□□□□ -1.82
VAM3YOR106W DCS1Q06151 350 aa3.71□□□□□ -1.82
VAM3YOR106W RIF2Q06208 395 aa3.71□□□□□ -1.82
VAM3YOR106W RRG1Q12167 365 aaPredicted RBP3.71□□□□□ -1.82
VAM3YOR106W TY1B-AO13527 1196 aaKnown RBP3.7□□□□□ -1.82
VAM3YOR106W JNM1P36224 373 aa3.7□□□□□ -1.82
VAM3YOR106W ATP3P38077 311 aaKnown RBP3.7□□□□□ -1.82
VAM3YOR106W YFR057WP43625 151 aa3.7□□□□□ -1.82
VAM3YOR106W CCE1Q03702 353 aa3.7□□□□□ -1.82
VAM3YOR106W RRP9Q06506 573 aaKnown RBP3.7□□□□□ -1.82
VAM3YOR106W MED2Q12124 431 aa3.7□□□□□ -1.82
VAM3YOR106W AFI1Q99222 893 aa3.7□□□□□ -1.82
VAM3YOR106W AAT2P23542 418 aaKnown RBP3.69□□□□□ -1.82
VAM3YOR106W PRR1P28708 518 aa3.69□□□□□ -1.82
VAM3YOR106W SPT10P35208 640 aa3.69□□□□□ -1.82
VAM3YOR106W BIR1P47134 954 aa3.69□□□□□ -1.82
VAM3YOR106W MRM2P53123 320 aa3.69□□□□□ -1.82
VAM3YOR106W ALF1P53904 254 aa3.69□□□□□ -1.82
VAM3YOR106W OCA2P53949 197 aa3.69□□□□□ -1.82
VAM3YOR106W URH1Q04179 340 aa3.69□□□□□ -1.82
VAM3YOR106W LIP2Q06005 328 aa3.69□□□□□ -1.82
VAM3YOR106W ISN1Q99312 450 aa3.69□□□□□ -1.82
VAM3YOR106W IMA3P0CW40 589 aa3.68□□□□□ -1.82
VAM3YOR106W IMA4P0CW41 589 aa3.68□□□□□ -1.82
VAM3YOR106W MSI1P13712 422 aa3.68□□□□□ -1.82
VAM3YOR106W TFB1P32776 642 aa3.68□□□□□ -1.82
VAM3YOR106W SWE1P32944 819 aa3.68□□□□□ -1.82
VAM3YOR106W BYE1P36106 594 aa3.68□□□□□ -1.82
VAM3YOR106W RTN1Q04947 295 aaKnown RBP3.68□□□□□ -1.82
VAM3YOR106W MDM36Q06820 579 aa3.68□□□□□ -1.82
VAM3YOR106W IMA2Q08295 589 aa3.68□□□□□ -1.82
VAM3YOR106W SMF3Q12078 473 aaPredicted RBP3.68□□□□□ -1.82
VAM3YOR106W YGK3Q12222 375 aaPredicted RBP3.68□□□□□ -1.82
VAM3YOR106W YDL012CQ12489 107 aa3.68□□□□□ -1.82
VAM3YOR106W ADE4P04046 510 aaKnown RBP3.67□□□□□ -1.82
VAM3YOR106W RPB5P20434 215 aa3.67□□□□□ -1.82
VAM3YOR106W LSM5P40089 93 aaKnown RBP3.67□□□□□ -1.82
VAM3YOR106W ACL4Q03771 387 aa3.67□□□□□ -1.82
VAM3YOR106W PHA2P32452 334 aa3.66□□□□□ -1.82
VAM3YOR106W OXA1P39952 402 aa3.66□□□□□ -1.82
VAM3YOR106W MAM33P40513 266 aa3.66□□□□□ -1.82
VAM3YOR106W BNI5P53890 448 aaKnown RBP3.66□□□□□ -1.82
VAM3YOR106W APJ1P53940 528 aa3.66□□□□□ -1.82
VAM3YOR106W STD1Q02794 444 aa3.66□□□□□ -1.82
VAM3YOR106W HOT1Q03213 719 aa3.66□□□□□ -1.82
VAM3YOR106W MMT1Q03218 510 aa3.66□□□□□ -1.82
VAM3YOR106W NIP1P32497 812 aaKnown RBP3.65□□□□□ -1.83
VAM3YOR106W IES6P32617 166 aa3.65□□□□□ -1.83
VAM3YOR106W HAC1P41546 238 aa3.65□□□□□ -1.83
VAM3YOR106W LCB3P47013 409 aa3.65□□□□□ -1.83
VAM3YOR106W CMS1Q07897 291 aaKnown RBP3.65□□□□□ -1.83
VAM3YOR106W SMC5Q08204 1093 aa3.65□□□□□ -1.83
VAM3YOR106W NCA2Q12374 616 aa3.65□□□□□ -1.83
VAM3YOR106W CEX1Q12453 761 aa3.65□□□□□ -1.83
VAM3YOR106W CAK1P43568 368 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms