RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W SRL2Q12020 392 aa2.38□□□□□ -2.03
BER1YLR412W CHK1P38147 527 aa2.37□□□□□ -2.03
BER1YLR412W RRP4P38792 359 aaKnown RBP2.37□□□□□ -2.03
BER1YLR412W SBE22P38814 852 aa2.37□□□□□ -2.03
BER1YLR412W YIL029CP40538 142 aa2.37□□□□□ -2.03
BER1YLR412W GPD2P41911 440 aaKnown RBP2.37□□□□□ -2.03
BER1YLR412W SKO1Q02100 647 aa2.37□□□□□ -2.03
BER1YLR412W YMR155WQ03795 547 aa2.37□□□□□ -2.03
BER1YLR412W YLR287CQ05881 355 aa2.37□□□□□ -2.03
BER1YLR412W DIS3Q08162 1001 aaKnown RBP2.37□□□□□ -2.03
BER1YLR412W INH1P01097 85 aa2.36□□□□□ -2.03
BER1YLR412W RPN12P32496 274 aa2.36□□□□□ -2.03
BER1YLR412W RRN10P38204 145 aa2.36□□□□□ -2.03
BER1YLR412W ISN1Q99312 450 aa2.36□□□□□ -2.03
BER1YLR412W YRF1-4O13559 1382 aa2.36□□□□□ -2.03
BER1YLR412W TY1B-AO13527 1196 aaKnown RBP2.35□□□□□ -2.03
BER1YLR412W CDC31P06704 161 aaKnown RBP2.35□□□□□ -2.03
BER1YLR412W YCL068CP25593 260 aa2.35□□□□□ -2.03
BER1YLR412W MID2P36027 376 aa2.35□□□□□ -2.03
BER1YLR412W MMS4P38257 691 aa2.35□□□□□ -2.03
BER1YLR412W RTC2P38279 296 aa2.35□□□□□ -2.03
BER1YLR412W DFG10P40526 253 aa2.35□□□□□ -2.03
BER1YLR412W CCE1Q03702 353 aa2.35□□□□□ -2.03
BER1YLR412W ROY1Q04847 553 aa2.35□□□□□ -2.03
BER1YLR412W DON1Q05610 365 aa2.35□□□□□ -2.03
BER1YLR412W COG4Q06096 861 aa2.35□□□□□ -2.03
BER1YLR412W BUG1Q12191 341 aa2.35□□□□□ -2.03
BER1YLR412W TPT1Q12272 230 aaKnown RBP2.35□□□□□ -2.03
BER1YLR412W JID1Q12350 301 aa2.35□□□□□ -2.03
BER1YLR412W SFI1Q12369 946 aa2.35□□□□□ -2.03
BER1YLR412W URA4P20051 364 aa2.34□□□□□ -2.03
BER1YLR412W REC107P21651 314 aa2.34□□□□□ -2.03
BER1YLR412W YCR051WP25631 222 aa2.34□□□□□ -2.03
BER1YLR412W SPT10P35208 640 aa2.34□□□□□ -2.03
BER1YLR412W YBR056WP38081 501 aa2.34□□□□□ -2.03
BER1YLR412W YFR057WP43625 151 aa2.34□□□□□ -2.03
BER1YLR412W BIR1P47134 954 aa2.34□□□□□ -2.03
BER1YLR412W MRM2P53123 320 aa2.34□□□□□ -2.03
BER1YLR412W MDM1Q01846 1127 aa2.34□□□□□ -2.03
BER1YLR412W KAP120Q02932 1032 aa2.34□□□□□ -2.03
BER1YLR412W YMR130WQ04223 302 aa2.34□□□□□ -2.03
BER1YLR412W LIP2Q06005 328 aa2.34□□□□□ -2.03
BER1YLR412W SNT309Q06091 175 aaPredicted RBP2.34□□□□□ -2.03
BER1YLR412W NDE2Q07500 545 aa2.34□□□□□ -2.03
BER1YLR412W RAX1Q08760 435 aa2.34□□□□□ -2.03
BER1YLR412W ATG34Q12292 412 aa2.34□□□□□ -2.03
BER1YLR412W SNU66Q12420 587 aaPredicted RBP2.34□□□□□ -2.03
BER1YLR412W IMA3P0CW40 589 aa2.33□□□□□ -2.04
BER1YLR412W IMA4P0CW41 589 aa2.33□□□□□ -2.04
BER1YLR412W HOM3P10869 527 aa2.33□□□□□ -2.04
BER1YLR412W MSI1P13712 422 aa2.33□□□□□ -2.04
BER1YLR412W AAT2P23542 418 aaKnown RBP2.33□□□□□ -2.04
BER1YLR412W BRF1P29056 596 aa2.33□□□□□ -2.04
BER1YLR412W PHA2P32452 334 aa2.33□□□□□ -2.04
BER1YLR412W RRP1P35178 278 aaPredicted RBP2.33□□□□□ -2.04
BER1YLR412W COX14P39103 70 aa2.33□□□□□ -2.04
BER1YLR412W OXA1P39952 402 aa2.33□□□□□ -2.04
BER1YLR412W OCA2P53949 197 aa2.33□□□□□ -2.04
BER1YLR412W SUB1P54000 292 aaKnown RBP2.33□□□□□ -2.04
BER1YLR412W URH1Q04179 340 aa2.33□□□□□ -2.04
BER1YLR412W DCS1Q06151 350 aa2.33□□□□□ -2.04
BER1YLR412W RIF2Q06208 395 aa2.33□□□□□ -2.04
BER1YLR412W IMA2Q08295 589 aa2.33□□□□□ -2.04
BER1YLR412W SMF3Q12078 473 aaPredicted RBP2.33□□□□□ -2.04
BER1YLR412W RRG1Q12167 365 aaPredicted RBP2.33□□□□□ -2.04
BER1YLR412W AFI1Q99222 893 aa2.33□□□□□ -2.04
BER1YLR412W FAB1P34756 2278 aa2.32□□□□□ -2.04
BER1YLR412W LSM5P40089 93 aaKnown RBP2.32□□□□□ -2.04
BER1YLR412W SIM1P40472 476 aa2.32□□□□□ -2.04
BER1YLR412W YGR250CP53316 781 aaKnown RBP2.32□□□□□ -2.04
BER1YLR412W BNI5P53890 448 aaKnown RBP2.32□□□□□ -2.04
BER1YLR412W RNY1Q02933 434 aaKnown RBP2.32□□□□□ -2.04
BER1YLR412W RRP9Q06506 573 aaKnown RBP2.32□□□□□ -2.04
BER1YLR412W YGK3Q12222 375 aaPredicted RBP2.32□□□□□ -2.04
BER1YLR412W COX3P00420 269 aa2.31□□□□□ -2.04
BER1YLR412W ADE4P04046 510 aaKnown RBP2.31□□□□□ -2.04
BER1YLR412W FUR1P18562 216 aaKnown RBP2.31□□□□□ -2.04
BER1YLR412W RPB5P20434 215 aa2.31□□□□□ -2.04
BER1YLR412W IES6P32617 166 aa2.31□□□□□ -2.04
BER1YLR412W NFU1P32860 256 aa2.31□□□□□ -2.04
BER1YLR412W BYE1P36106 594 aa2.31□□□□□ -2.04
BER1YLR412W BAT1P38891 393 aaKnown RBP2.31□□□□□ -2.04
BER1YLR412W LCB3P47013 409 aa2.31□□□□□ -2.04
BER1YLR412W BNS1P50084 137 aa2.31□□□□□ -2.04
BER1YLR412W CRH1P53301 507 aa2.31□□□□□ -2.04
BER1YLR412W ACL4Q03771 387 aa2.31□□□□□ -2.04
BER1YLR412W RTN1Q04947 295 aaKnown RBP2.31□□□□□ -2.04
BER1YLR412W MDM36Q06820 579 aa2.31□□□□□ -2.04
BER1YLR412W SCM3Q12334 223 aa2.31□□□□□ -2.04
BER1YLR412W EXG1P23776 448 aaKnown RBP2.3□□□□□ -2.04
BER1YLR412W PRR1P28708 518 aa2.3□□□□□ -2.04
BER1YLR412W DPH5P32469 300 aaPredicted RBP2.3□□□□□ -2.04
BER1YLR412W NIP1P32497 812 aaKnown RBP2.3□□□□□ -2.04
BER1YLR412W SWE1P32944 819 aa2.3□□□□□ -2.04
BER1YLR412W ATP3P38077 311 aaKnown RBP2.3□□□□□ -2.04
BER1YLR412W NOC2P39744 710 aaKnown RBP2.3□□□□□ -2.04
BER1YLR412W YER186CP40101 306 aa2.3□□□□□ -2.04
BER1YLR412W HAC1P41546 238 aa2.3□□□□□ -2.04
BER1YLR412W EGT2P42835 1041 aa2.3□□□□□ -2.04
BER1YLR412W AIM24P47127 394 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms