RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W GPD2P41911 440 aaKnown RBP3.12□□□□□ -1.91
SMD2YLR275W MTQ1P53944 314 aa3.12□□□□□ -1.91
SMD2YLR275W HSP26P15992 214 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
SMD2YLR275W REC107P21651 314 aa3.11□□□□□ -1.91
SMD2YLR275W NFU1P32860 256 aa3.11□□□□□ -1.91
SMD2YLR275W MRP21P38175 177 aa3.11□□□□□ -1.91
SMD2YLR275W RRN10P38204 145 aa3.11□□□□□ -1.91
SMD2YLR275W MMS4P38257 691 aa3.11□□□□□ -1.91
SMD2YLR275W YJR085CP47131 105 aaKnown RBP3.11□□□□□ -1.91
SMD2YLR275W MDM1Q01846 1127 aa3.11□□□□□ -1.91
SMD2YLR275W NUP116Q02630 1113 aa3.11□□□□□ -1.91
SMD2YLR275W KAP120Q02932 1032 aa3.11□□□□□ -1.91
SMD2YLR275W DON1Q05610 365 aa3.11□□□□□ -1.91
SMD2YLR275W DIS3Q08162 1001 aaKnown RBP3.11□□□□□ -1.91
SMD2YLR275W PLP2Q12017 286 aa3.11□□□□□ -1.91
SMD2YLR275W SNU66Q12420 587 aaPredicted RBP3.11□□□□□ -1.91
SMD2YLR275W IZH2Q12442 317 aa3.11□□□□□ -1.91
SMD2YLR275W YMR155WQ03795 547 aa3.1□□□□□ -1.91
SMD2YLR275W TPT1Q12272 230 aaKnown RBP3.1□□□□□ -1.91
SMD2YLR275W SCM3Q12334 223 aa3.1□□□□□ -1.91
SMD2YLR275W AHC1Q12433 566 aa3.1□□□□□ -1.91
SMD2YLR275W YCR051WP25631 222 aa3.09□□□□□ -1.91
SMD2YLR275W CHK1P38147 527 aa3.09□□□□□ -1.91
SMD2YLR275W RRP4P38792 359 aaKnown RBP3.09□□□□□ -1.91
SMD2YLR275W NOC2P39744 710 aaKnown RBP3.09□□□□□ -1.91
SMD2YLR275W YIL029CP40538 142 aa3.09□□□□□ -1.91
SMD2YLR275W ADA2Q02336 434 aa3.09□□□□□ -1.91
SMD2YLR275W NDE2Q07500 545 aa3.09□□□□□ -1.91
SMD2YLR275W RAX1Q08760 435 aa3.09□□□□□ -1.91
SMD2YLR275W BUG1Q12191 341 aa3.09□□□□□ -1.91
SMD2YLR275W ATG34Q12292 412 aa3.09□□□□□ -1.91
SMD2YLR275W JID1Q12350 301 aa3.09□□□□□ -1.91
SMD2YLR275W ISN1Q99312 450 aa3.09□□□□□ -1.91
SMD2YLR275W HOM3P10869 527 aa3.08□□□□□ -1.92
SMD2YLR275W URA4P20051 364 aa3.08□□□□□ -1.92
SMD2YLR275W RRP1P35178 278 aaPredicted RBP3.08□□□□□ -1.92
SMD2YLR275W YBR056WP38081 501 aa3.08□□□□□ -1.92
SMD2YLR275W SBE22P38814 852 aa3.08□□□□□ -1.92
SMD2YLR275W COX14P39103 70 aa3.08□□□□□ -1.92
SMD2YLR275W MIG3P39943 394 aa3.08□□□□□ -1.92
SMD2YLR275W ROY1Q04847 553 aa3.08□□□□□ -1.92
SMD2YLR275W TY1B-AO13527 1196 aaKnown RBP3.07□□□□□ -1.92
SMD2YLR275W YCL068CP25593 260 aa3.07□□□□□ -1.92
SMD2YLR275W BRF1P29056 596 aa3.07□□□□□ -1.92
SMD2YLR275W JNM1P36224 373 aa3.07□□□□□ -1.92
SMD2YLR275W LSM5P40089 93 aaKnown RBP3.07□□□□□ -1.92
SMD2YLR275W SRB7P47822 140 aa3.07□□□□□ -1.92
SMD2YLR275W URH1Q04179 340 aa3.07□□□□□ -1.92
SMD2YLR275W YMR130WQ04223 302 aa3.07□□□□□ -1.92
SMD2YLR275W DCS1Q06151 350 aa3.07□□□□□ -1.92
SMD2YLR275W RRG1Q12167 365 aaPredicted RBP3.07□□□□□ -1.92
SMD2YLR275W YDL012CQ12489 107 aa3.07□□□□□ -1.92
SMD2YLR275W FUR1P18562 216 aaKnown RBP3.06□□□□□ -1.92
SMD2YLR275W MID2P36027 376 aa3.06□□□□□ -1.92
SMD2YLR275W RTC2P38279 296 aa3.06□□□□□ -1.92
SMD2YLR275W DFG10P40526 253 aa3.06□□□□□ -1.92
SMD2YLR275W YGR250CP53316 781 aaKnown RBP3.06□□□□□ -1.92
SMD2YLR275W OCA2P53949 197 aa3.06□□□□□ -1.92
SMD2YLR275W CCE1Q03702 353 aa3.06□□□□□ -1.92
SMD2YLR275W RIF2Q06208 395 aa3.06□□□□□ -1.92
SMD2YLR275W RRP9Q06506 573 aaKnown RBP3.06□□□□□ -1.92
SMD2YLR275W AFI1Q99222 893 aa3.06□□□□□ -1.92
SMD2YLR275W ADE4P04046 510 aaKnown RBP3.05□□□□□ -1.92
SMD2YLR275W IMA3P0CW40 589 aa3.05□□□□□ -1.92
SMD2YLR275W IMA4P0CW41 589 aa3.05□□□□□ -1.92
SMD2YLR275W MSI1P13712 422 aa3.05□□□□□ -1.92
SMD2YLR275W PHA2P32452 334 aa3.05□□□□□ -1.92
SMD2YLR275W NIP1P32497 812 aaKnown RBP3.05□□□□□ -1.92
SMD2YLR275W BYE1P36106 594 aa3.05□□□□□ -1.92
SMD2YLR275W BIR1P47134 954 aa3.05□□□□□ -1.92
SMD2YLR275W MRM2P53123 320 aa3.05□□□□□ -1.92
SMD2YLR275W BNI5P53890 448 aaKnown RBP3.05□□□□□ -1.92
SMD2YLR275W ACL4Q03771 387 aa3.05□□□□□ -1.92
SMD2YLR275W IMA2Q08295 589 aa3.05□□□□□ -1.92
SMD2YLR275W SMF3Q12078 473 aaPredicted RBP3.05□□□□□ -1.92
SMD2YLR275W MED2Q12124 431 aa3.05□□□□□ -1.92
SMD2YLR275W RPB5P20434 215 aa3.04□□□□□ -1.92
SMD2YLR275W AAT2P23542 418 aaKnown RBP3.04□□□□□ -1.92
SMD2YLR275W PRR1P28708 518 aa3.04□□□□□ -1.92
SMD2YLR275W SPT10P35208 640 aa3.04□□□□□ -1.92
SMD2YLR275W YFR057WP43625 151 aa3.04□□□□□ -1.92
SMD2YLR275W SNT309Q06091 175 aaPredicted RBP3.04□□□□□ -1.92
SMD2YLR275W MDM36Q06820 579 aa3.04□□□□□ -1.92
SMD2YLR275W YGK3Q12222 375 aaPredicted RBP3.04□□□□□ -1.92
SMD2YLR275W TFB1P32776 642 aa3.03□□□□□ -1.92
SMD2YLR275W ATP3P38077 311 aaKnown RBP3.03□□□□□ -1.92
SMD2YLR275W STD1Q02794 444 aa3.03□□□□□ -1.92
SMD2YLR275W RTN1Q04947 295 aaKnown RBP3.03□□□□□ -1.92
SMD2YLR275W MMR1Q06324 491 aa3.03□□□□□ -1.92
SMD2YLR275W CMS1Q07897 291 aaKnown RBP3.03□□□□□ -1.92
SMD2YLR275W COX3P00420 269 aa3.02□□□□□ -1.93
SMD2YLR275W ADK2P26364 225 aa3.02□□□□□ -1.93
SMD2YLR275W OXA1P39952 402 aa3.02□□□□□ -1.93
SMD2YLR275W SIM1P40472 476 aa3.02□□□□□ -1.93
SMD2YLR275W MST27P53176 234 aa3.02□□□□□ -1.93
SMD2YLR275W RPT4P53549 437 aaKnown RBP3.02□□□□□ -1.93
SMD2YLR275W HOT1Q03213 719 aa3.02□□□□□ -1.93
SMD2YLR275W MMT1Q03218 510 aa3.02□□□□□ -1.93
SMD2YLR275W LIP2Q06005 328 aa3.02□□□□□ -1.93
SMD2YLR275W NCA2Q12374 616 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms