RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W YPR022CQ12139 1133 aa2.02□□□□□ -2.09
SEC22YLR268W SMC6Q12749 1114 aa2.02□□□□□ -2.09
SEC22YLR268W BI3Q9ZZW7 517 aa2.02□□□□□ -2.09
SEC22YLR268W TY1B-AO13527 1196 aaKnown RBP2.01□□□□□ -2.09
SEC22YLR268W HSP26P15992 214 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
SEC22YLR268W ERV1P27882 189 aa2.01□□□□□ -2.09
SEC22YLR268W SMY1P32364 656 aaKnown RBP2.01□□□□□ -2.09
SEC22YLR268W RRN10P38204 145 aa2.01□□□□□ -2.09
SEC22YLR268W LYS1P38998 373 aaRIP-Chip data2.01□□□□□ -2.09not detected
SEC22YLR268W MST28P39552 234 aa2.01□□□□□ -2.09
SEC22YLR268W TOM22P49334 152 aa2.01□□□□□ -2.09
SEC22YLR268W YNR048WP53740 393 aa2.01□□□□□ -2.09
SEC22YLR268W FRE4P53746 719 aa2.01□□□□□ -2.09
SEC22YLR268W OCA2P53949 197 aa2.01□□□□□ -2.09
SEC22YLR268W CIK1Q01649 594 aa2.01□□□□□ -2.09
SEC22YLR268W GIP3Q03016 1276 aa2.01□□□□□ -2.09
SEC22YLR268W TAF12Q03761 539 aa2.01□□□□□ -2.09
SEC22YLR268W MMR1Q06324 491 aa2.01□□□□□ -2.09
SEC22YLR268W VPS54Q12071 889 aa2.01□□□□□ -2.09
SEC22YLR268W ERP4Q12450 207 aa2.01□□□□□ -2.09
SEC22YLR268W YBL111CQ3E7Y5 667 aa2.01□□□□□ -2.09
SEC22YLR268W MTR10Q99189 972 aa2.01□□□□□ -2.09
SEC22YLR268W RAD61Q99359 647 aa2.01□□□□□ -2.09
SEC22YLR268W SPO7P18410 259 aa2□□□□□ -2.09
SEC22YLR268W KKQ8P36004 724 aa2□□□□□ -2.09
SEC22YLR268W PCF11P39081 626 aaPredicted RBP2□□□□□ -2.09
SEC22YLR268W YAL037WP39728 267 aa2□□□□□ -2.09
SEC22YLR268W PHO86P46956 311 aa2□□□□□ -2.09
SEC22YLR268W RPT4P53549 437 aaKnown RBP2□□□□□ -2.09
SEC22YLR268W CWC25P53854 179 aaKnown RBP2□□□□□ -2.09
SEC22YLR268W GPI15P53961 229 aa2□□□□□ -2.09
SEC22YLR268W BET5Q03630 159 aa2□□□□□ -2.09
SEC22YLR268W SKI7Q08491 747 aaPredicted RBP2□□□□□ -2.09
SEC22YLR268W TEF1P02994 458 aaKnown RBP1.99□□□□□ -2.09
SEC22YLR268W ILV5P06168 395 aaKnown RBP1.99□□□□□ -2.09
SEC22YLR268W HOM3P10869 527 aa1.99□□□□□ -2.09
SEC22YLR268W CTR86P25355 563 aa1.99□□□□□ -2.09
SEC22YLR268W LTV1P34078 463 aa1.99□□□□□ -2.09
SEC22YLR268W MRPL10P36520 322 aa1.99□□□□□ -2.09
SEC22YLR268W RRP4P38792 359 aaKnown RBP1.99□□□□□ -2.09
SEC22YLR268W VHS2P40463 436 aa1.99□□□□□ -2.09
SEC22YLR268W BUD27P43573 796 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
SEC22YLR268W RSC1P53236 928 aa1.99□□□□□ -2.09
SEC22YLR268W YMR181CQ03231 154 aa1.99□□□□□ -2.09
SEC22YLR268W DCI1Q08558 271 aa1.99□□□□□ -2.09
SEC22YLR268W BUG1Q12191 341 aa1.99□□□□□ -2.09
SEC22YLR268W ORT1Q12375 292 aa1.99□□□□□ -2.09
SEC22YLR268W RMD5Q12508 421 aa1.99□□□□□ -2.09
SEC22YLR268W ADE4P04046 510 aaKnown RBP1.98□□□□□ -2.09
SEC22YLR268W SLY1P22213 666 aa1.98□□□□□ -2.09
SEC22YLR268W RAD57P25301 460 aa1.98□□□□□ -2.09
SEC22YLR268W ITR1P30605 584 aa1.98□□□□□ -2.09
SEC22YLR268W NIP1P32497 812 aaKnown RBP1.98□□□□□ -2.09
SEC22YLR268W PEX5P35056 612 aa1.98□□□□□ -2.09
SEC22YLR268W YBR056WP38081 501 aa1.98□□□□□ -2.09
SEC22YLR268W OLA1P38219 394 aaKnown RBP1.98□□□□□ -2.09
SEC22YLR268W ZTA1P38230 334 aaKnown RBP1.98□□□□□ -2.09
SEC22YLR268W SER3P40054 469 aa1.98□□□□□ -2.09
SEC22YLR268W PHB2P50085 310 aa1.98□□□□□ -2.09
SEC22YLR268W YGR111WP53265 400 aa1.98□□□□□ -2.09
SEC22YLR268W VPS9P54787 451 aa1.98□□□□□ -2.09
SEC22YLR268W PPM1Q04081 328 aa1.98□□□□□ -2.09
SEC22YLR268W SXM1Q04175 944 aaKnown RBP1.98□□□□□ -2.09
SEC22YLR268W GYL1Q04322 720 aa1.98□□□□□ -2.09
SEC22YLR268W IRC25Q07951 179 aa1.98□□□□□ -2.09
SEC22YLR268W SNX3Q08826 162 aaKnown RBP1.98□□□□□ -2.09
SEC22YLR268W SRL2Q12020 392 aa1.98□□□□□ -2.09
SEC22YLR268W AEP3Q12089 606 aa1.98□□□□□ -2.09
SEC22YLR268W RUP1Q12242 671 aa1.98□□□□□ -2.09
SEC22YLR268W GPM3Q12326 303 aa1.98□□□□□ -2.09
SEC22YLR268W IMA3P0CW40 589 aa1.97□□□□□ -2.09
SEC22YLR268W IMA4P0CW41 589 aa1.97□□□□□ -2.09
SEC22YLR268W SPO12P17123 173 aa1.97□□□□□ -2.09
SEC22YLR268W MUD1P32605 298 aaKnown RBP1.97□□□□□ -2.09
SEC22YLR268W YKL097CP34245 136 aa1.97□□□□□ -2.09
SEC22YLR268W HEL1P36113 551 aa1.97□□□□□ -2.09
SEC22YLR268W ASC1P38011 319 aaKnown RBP1.97□□□□□ -2.09
SEC22YLR268W BMT2P38278 337 aa1.97□□□□□ -2.09
SEC22YLR268W FAD1P38913 306 aa1.97□□□□□ -2.09
SEC22YLR268W LCB2P40970 561 aa1.97□□□□□ -2.09
SEC22YLR268W YJL055WP47044 245 aa1.97□□□□□ -2.09
SEC22YLR268W AZR1P50080 613 aa1.97□□□□□ -2.09
SEC22YLR268W OAZ1Q02803 292 aa1.97□□□□□ -2.09
SEC22YLR268W RPN9Q04062 393 aaKnown RBP1.97□□□□□ -2.09
SEC22YLR268W URH1Q04179 340 aa1.97□□□□□ -2.09
SEC22YLR268W IMA2Q08295 589 aa1.97□□□□□ -2.09
SEC22YLR268W ATG34Q12292 412 aa1.97□□□□□ -2.09
SEC22YLR268W COX3P00420 269 aa1.96□□□□□ -2.1
SEC22YLR268W TRP1P00912 224 aa1.96□□□□□ -2.1
SEC22YLR268W PDE2P06776 526 aa1.96□□□□□ -2.1
SEC22YLR268W YBR137WP38276 179 aa1.96□□□□□ -2.1
SEC22YLR268W LRP1P38801 184 aaKnown RBP1.96□□□□□ -2.1
SEC22YLR268W GAT2P40209 560 aa1.96□□□□□ -2.1
SEC22YLR268W SFH5P47008 294 aa1.96□□□□□ -2.1
SEC22YLR268W BRO1P48582 844 aa1.96□□□□□ -2.1
SEC22YLR268W HXT11P54862 567 aa1.96□□□□□ -2.1
SEC22YLR268W MMT1Q03218 510 aa1.96□□□□□ -2.1
SEC22YLR268W PRP42Q03776 544 aaKnown RBP1.96□□□□□ -2.1
SEC22YLR268W YLR456WQ06199 204 aa1.96□□□□□ -2.1
SEC22YLR268W RRP9Q06506 573 aaKnown RBP1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms