RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C YAL037WP39728 267 aa2.88□□□□□ -1.95
YPT52YKR014C YIL029CP40538 142 aa2.88□□□□□ -1.95
YPT52YKR014C PHO86P46956 311 aa2.88□□□□□ -1.95
YPT52YKR014C ALF1P53904 254 aa2.88□□□□□ -1.95
YPT52YKR014C YMR155WQ03795 547 aa2.88□□□□□ -1.95
YPT52YKR014C DIS3Q08162 1001 aaKnown RBP2.88□□□□□ -1.95
YPT52YKR014C SNU66Q12420 587 aaPredicted RBP2.88□□□□□ -1.95
YPT52YKR014C ILV5P06168 395 aaKnown RBP2.87□□□□□ -1.95
YPT52YKR014C SPO12P17123 173 aa2.87□□□□□ -1.95
YPT52YKR014C PCL1P24867 279 aa2.87□□□□□ -1.95
YPT52YKR014C NFU1P32860 256 aa2.87□□□□□ -1.95
YPT52YKR014C UTH1P36135 365 aa2.87□□□□□ -1.95
YPT52YKR014C JLP2P40206 208 aa2.87□□□□□ -1.95
YPT52YKR014C NUP116Q02630 1113 aa2.87□□□□□ -1.95
YPT52YKR014C ARX1Q03862 593 aaKnown RBP2.87□□□□□ -1.95
YPT52YKR014C YMR130WQ04223 302 aa2.87□□□□□ -1.95
YPT52YKR014C MED2Q12124 431 aa2.87□□□□□ -1.95
YPT52YKR014C RRG1Q12167 365 aaPredicted RBP2.87□□□□□ -1.95
YPT52YKR014C TPT1Q12272 230 aaKnown RBP2.87□□□□□ -1.95
YPT52YKR014C URA4P20051 364 aa2.86□□□□□ -1.95
YPT52YKR014C BRF1P29056 596 aa2.86□□□□□ -1.95
YPT52YKR014C NUP2P32499 720 aa2.86□□□□□ -1.95
YPT52YKR014C CSE2P33308 149 aa2.86□□□□□ -1.95
YPT52YKR014C RRP1P35178 278 aaPredicted RBP2.86□□□□□ -1.95
YPT52YKR014C BYE1P36106 594 aa2.86□□□□□ -1.95
YPT52YKR014C ATP3P38077 311 aaKnown RBP2.86□□□□□ -1.95
YPT52YKR014C CHK1P38147 527 aa2.86□□□□□ -1.95
YPT52YKR014C BRO1P48582 844 aa2.86□□□□□ -1.95
YPT52YKR014C CUE5Q08412 411 aaKnown RBP2.86□□□□□ -1.95
YPT52YKR014C SRL2Q12020 392 aa2.86□□□□□ -1.95
YPT52YKR014C JID1Q12350 301 aa2.86□□□□□ -1.95
YPT52YKR014C PGA3Q12746 312 aaKnown RBP2.86□□□□□ -1.95
YPT52YKR014C YCL068CP25593 260 aa2.85□□□□□ -1.95
YPT52YKR014C TFB1P32776 642 aa2.85□□□□□ -1.95
YPT52YKR014C RRP4P38792 359 aaKnown RBP2.85□□□□□ -1.95
YPT52YKR014C COX14P39103 70 aa2.85□□□□□ -1.95
YPT52YKR014C AIM10P39965 576 aaKnown RBP2.85□□□□□ -1.95
YPT52YKR014C UTP18P40362 594 aaPredicted RBP2.85□□□□□ -1.95
YPT52YKR014C DFG10P40526 253 aa2.85□□□□□ -1.95
YPT52YKR014C GAB1P41733 394 aa2.85□□□□□ -1.95
YPT52YKR014C ROY1Q04847 553 aa2.85□□□□□ -1.95
YPT52YKR014C ATG34Q12292 412 aa2.85□□□□□ -1.95
YPT52YKR014C ERP4Q12450 207 aa2.85□□□□□ -1.95
YPT52YKR014C AFI1Q99222 893 aa2.85□□□□□ -1.95
YPT52YKR014C HSP26P15992 214 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
YPT52YKR014C RAD57P25301 460 aa2.84□□□□□ -1.95
YPT52YKR014C GEX1P25596 615 aa2.84□□□□□ -1.95
YPT52YKR014C PRR1P28708 518 aa2.84□□□□□ -1.95
YPT52YKR014C MID2P36027 376 aa2.84□□□□□ -1.95
YPT52YKR014C YHR131CP38835 850 aa2.84□□□□□ -1.95
YPT52YKR014C YFR057WP43625 151 aa2.84□□□□□ -1.95
YPT52YKR014C HOT1Q03213 719 aa2.84□□□□□ -1.95
YPT52YKR014C DCS1Q06151 350 aa2.84□□□□□ -1.95
YPT52YKR014C IZH2Q12442 317 aa2.84□□□□□ -1.95
YPT52YKR014C MRP21P38175 177 aa2.83□□□□□ -1.96
YPT52YKR014C MAM33P40513 266 aa2.83□□□□□ -1.96
YPT52YKR014C CCE1Q03702 353 aa2.83□□□□□ -1.96
YPT52YKR014C RRP9Q06506 573 aaKnown RBP2.83□□□□□ -1.96
YPT52YKR014C RAX1Q08760 435 aa2.83□□□□□ -1.96
YPT52YKR014C PLP2Q12017 286 aa2.83□□□□□ -1.96
YPT52YKR014C CEX1Q12453 761 aa2.83□□□□□ -1.96
YPT52YKR014C RPB5P20434 215 aa2.82□□□□□ -1.96
YPT52YKR014C HAC1P41546 238 aa2.82□□□□□ -1.96
YPT52YKR014C YJR085CP47131 105 aaKnown RBP2.82□□□□□ -1.96
YPT52YKR014C MRM2P53123 320 aa2.82□□□□□ -1.96
YPT52YKR014C MMT1Q03218 510 aa2.82□□□□□ -1.96
YPT52YKR014C ACL4Q03771 387 aa2.82□□□□□ -1.96
YPT52YKR014C URH1Q04179 340 aa2.82□□□□□ -1.96
YPT52YKR014C VPS54Q12071 889 aa2.82□□□□□ -1.96
YPT52YKR014C TY1B-AO13527 1196 aaKnown RBP2.81□□□□□ -1.96
YPT52YKR014C ADE4P04046 510 aaKnown RBP2.81□□□□□ -1.96
YPT52YKR014C MSI1P13712 422 aa2.81□□□□□ -1.96
YPT52YKR014C AAT2P23542 418 aaKnown RBP2.81□□□□□ -1.96
YPT52YKR014C RPC53P25441 422 aa2.81□□□□□ -1.96
YPT52YKR014C SBE22P38814 852 aa2.81□□□□□ -1.96
YPT52YKR014C LSM5P40089 93 aaKnown RBP2.81□□□□□ -1.96
YPT52YKR014C CAK1P43568 368 aaPredicted RBP2.81□□□□□ -1.96
YPT52YKR014C RPT4P53549 437 aaKnown RBP2.81□□□□□ -1.96
YPT52YKR014C STD1Q02794 444 aa2.81□□□□□ -1.96
YPT52YKR014C TSA2Q04120 196 aa2.81□□□□□ -1.96
YPT52YKR014C RIF2Q06208 395 aa2.81□□□□□ -1.96
YPT52YKR014C LOT6Q07923 191 aa2.81□□□□□ -1.96
YPT52YKR014C YGK3Q12222 375 aaPredicted RBP2.81□□□□□ -1.96
YPT52YKR014C MTR10Q99189 972 aa2.81□□□□□ -1.96
YPT52YKR014C DBF4P32325 704 aa2.8□□□□□ -1.96
YPT52YKR014C VMA8P32610 256 aaKnown RBP2.8□□□□□ -1.96
YPT52YKR014C PXA2P34230 853 aa2.8□□□□□ -1.96
YPT52YKR014C SPT10P35208 640 aa2.8□□□□□ -1.96
YPT52YKR014C RTC2P38279 296 aa2.8□□□□□ -1.96
YPT52YKR014C MIG3P39943 394 aa2.8□□□□□ -1.96
YPT52YKR014C AIM24P47127 394 aa2.8□□□□□ -1.96
YPT52YKR014C BIR1P47134 954 aa2.8□□□□□ -1.96
YPT52YKR014C BNI5P53890 448 aaKnown RBP2.8□□□□□ -1.96
YPT52YKR014C OCA2P53949 197 aa2.8□□□□□ -1.96
YPT52YKR014C RTN1Q04947 295 aaKnown RBP2.8□□□□□ -1.96
YPT52YKR014C LIP2Q06005 328 aa2.8□□□□□ -1.96
YPT52YKR014C MDM36Q06820 579 aa2.8□□□□□ -1.96
YPT52YKR014C SMC5Q08204 1093 aa2.8□□□□□ -1.96
YPT52YKR014C PDX1P16451 410 aa2.79□□□□□ -1.96
YPT52YKR014C ADK2P26364 225 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms