RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C PCF11P39081 626 aaPredicted RBP3.09□□□□□ -1.91
CTK2YJL006C ZIM17P42844 174 aa3.09□□□□□ -1.91
CTK2YJL006C TCB2P48231 1178 aa3.09□□□□□ -1.91
CTK2YJL006C MTM1P53320 366 aa3.09□□□□□ -1.91
CTK2YJL006C GPI15P53961 229 aa3.09□□□□□ -1.91
CTK2YJL006C GIP3Q03016 1276 aa3.09□□□□□ -1.91
CTK2YJL006C MRPL35Q06678 367 aa3.09□□□□□ -1.91
CTK2YJL006C SNX3Q08826 162 aaKnown RBP3.09□□□□□ -1.91
CTK2YJL006C MED2Q12124 431 aa3.09□□□□□ -1.91
CTK2YJL006C RBD2Q12270 262 aa3.09□□□□□ -1.91
CTK2YJL006C ISA2Q12425 185 aa3.09□□□□□ -1.91
CTK2YJL006C TY1B-AO13527 1196 aaKnown RBP3.08□□□□□ -1.92
CTK2YJL006C ADH2P00331 348 aaKnown RBP3.08□□□□□ -1.92
CTK2YJL006C SPO12P17123 173 aa3.08□□□□□ -1.92
CTK2YJL006C NIP1P32497 812 aaKnown RBP3.08□□□□□ -1.92
CTK2YJL006C TOM22P49334 152 aa3.08□□□□□ -1.92
CTK2YJL006C PHB2P50085 310 aa3.08□□□□□ -1.92
CTK2YJL006C HER2Q03557 464 aa3.08□□□□□ -1.92
CTK2YJL006C VPS54Q12071 889 aa3.08□□□□□ -1.92
CTK2YJL006C SWR1Q05471 1514 aa3.08□□□□□ -1.92
CTK2YJL006C MUD1P32605 298 aaKnown RBP3.07□□□□□ -1.92
CTK2YJL006C RRP4P38792 359 aaKnown RBP3.07□□□□□ -1.92
CTK2YJL006C AZR1P50080 613 aa3.07□□□□□ -1.92
CTK2YJL006C HRI1Q05905 244 aaKnown RBP3.07□□□□□ -1.92
CTK2YJL006C MTR10Q99189 972 aa3.07□□□□□ -1.92
CTK2YJL006C COX3P00420 269 aa3.06□□□□□ -1.92
CTK2YJL006C ADE4P04046 510 aaKnown RBP3.06□□□□□ -1.92
CTK2YJL006C ARO3P14843 370 aaKnown RBP3.06□□□□□ -1.92
CTK2YJL006C MNS1P32906 549 aa3.06□□□□□ -1.92
CTK2YJL006C SER3P40054 469 aa3.06□□□□□ -1.92
CTK2YJL006C OCA2P53949 197 aa3.06□□□□□ -1.92
CTK2YJL006C OAZ1Q02803 292 aa3.06□□□□□ -1.92
CTK2YJL006C URH1Q04179 340 aa3.06□□□□□ -1.92
CTK2YJL006C AIM32Q04689 311 aa3.06□□□□□ -1.92
CTK2YJL006C SRL2Q12020 392 aa3.06□□□□□ -1.92
CTK2YJL006C ATG34Q12292 412 aa3.06□□□□□ -1.92
CTK2YJL006C SMC6Q12749 1114 aa3.06□□□□□ -1.92
CTK2YJL006C TRP1P00912 224 aa3.05□□□□□ -1.92
CTK2YJL006C RPS8AP0CX39 200 aaKnown RBP3.05□□□□□ -1.92
CTK2YJL006C RPS8BP0CX40 200 aaKnown RBP3.05□□□□□ -1.92
CTK2YJL006C HOM3P10869 527 aa3.05□□□□□ -1.92
CTK2YJL006C MDH1P17505 334 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
CTK2YJL006C DAL2P25335 343 aa3.05□□□□□ -1.92
CTK2YJL006C CDC60P26637 1090 aaKnown RBP3.05□□□□□ -1.92
CTK2YJL006C PAN6P40459 309 aa3.05□□□□□ -1.92
CTK2YJL006C VHS2P40463 436 aa3.05□□□□□ -1.92
CTK2YJL006C SIM1P40472 476 aa3.05□□□□□ -1.92
CTK2YJL006C YPS6P40583 537 aa3.05□□□□□ -1.92
CTK2YJL006C YML6P51998 286 aa3.05□□□□□ -1.92
CTK2YJL006C CWC25P53854 179 aaKnown RBP3.05□□□□□ -1.92
CTK2YJL006C RPN9Q04062 393 aaKnown RBP3.05□□□□□ -1.92
CTK2YJL006C BCH1Q05029 724 aa3.05□□□□□ -1.92
CTK2YJL006C SNT309Q06091 175 aaPredicted RBP3.05□□□□□ -1.92
CTK2YJL006C AEP3Q12089 606 aa3.05□□□□□ -1.92
CTK2YJL006C CYC3P06182 269 aa3.04□□□□□ -1.92
CTK2YJL006C NFT1P0CE68 1218 aa3.04□□□□□ -1.92
CTK2YJL006C PET123P17558 318 aa3.04□□□□□ -1.92
CTK2YJL006C RAD57P25301 460 aa3.04□□□□□ -1.92
CTK2YJL006C RVS161P25343 265 aaKnown RBP3.04□□□□□ -1.92
CTK2YJL006C VMA8P32610 256 aaKnown RBP3.04□□□□□ -1.92
CTK2YJL006C ASC1P38011 319 aaKnown RBP3.04□□□□□ -1.92
CTK2YJL006C MSG5P38590 489 aa3.04□□□□□ -1.92
CTK2YJL006C JLP2P40206 208 aa3.04□□□□□ -1.92
CTK2YJL006C SFH5P47008 294 aa3.04□□□□□ -1.92
CTK2YJL006C YGR111WP53265 400 aa3.04□□□□□ -1.92
CTK2YJL006C RHO5P53879 331 aaKnown RBP3.04□□□□□ -1.92
CTK2YJL006C PRP42Q03776 544 aaKnown RBP3.04□□□□□ -1.92
CTK2YJL006C UAF30Q08747 228 aa3.04□□□□□ -1.92
CTK2YJL006C FAB1P34756 2278 aa3.03□□□□□ -1.92
CTK2YJL006C KAR9P32526 644 aa3.03□□□□□ -1.92
CTK2YJL006C ZTA1P38230 334 aaKnown RBP3.03□□□□□ -1.92
CTK2YJL006C SRP72P38688 640 aaKnown RBP3.03□□□□□ -1.92
CTK2YJL006C GAT2P40209 560 aa3.03□□□□□ -1.92
CTK2YJL006C RNY1Q02933 434 aaKnown RBP3.03□□□□□ -1.92
CTK2YJL006C RRP9Q06506 573 aaKnown RBP3.03□□□□□ -1.92
CTK2YJL006C TPT1Q12272 230 aaKnown RBP3.03□□□□□ -1.92
CTK2YJL006C IMA3P0CW40 589 aa3.02□□□□□ -1.93
CTK2YJL006C IMA4P0CW41 589 aa3.02□□□□□ -1.93
CTK2YJL006C YBR056WP38081 501 aa3.02□□□□□ -1.93
CTK2YJL006C OLA1P38219 394 aaKnown RBP3.02□□□□□ -1.93
CTK2YJL006C BUD27P43573 796 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
CTK2YJL006C SHY1P53266 389 aa3.02□□□□□ -1.93
CTK2YJL006C IMA2Q08295 589 aa3.02□□□□□ -1.93
CTK2YJL006C FDH1Q08911 376 aa3.02□□□□□ -1.93
CTK2YJL006C RUP1Q12242 671 aa3.02□□□□□ -1.93
CTK2YJL006C YRM1Q12340 786 aa3.02□□□□□ -1.93
CTK2YJL006C POP5P28005 173 aa3.01□□□□□ -1.93
CTK2YJL006C RIM1P32445 135 aaKnown RBP3.01□□□□□ -1.93
CTK2YJL006C CYS4P32582 507 aaKnown RBP3.01□□□□□ -1.93
CTK2YJL006C PXA2P34230 853 aa3.01□□□□□ -1.93
CTK2YJL006C RRP1P35178 278 aaPredicted RBP3.01□□□□□ -1.93
CTK2YJL006C HEL1P36113 551 aa3.01□□□□□ -1.93
CTK2YJL006C UTH1P36135 365 aa3.01□□□□□ -1.93
CTK2YJL006C CIK1Q01649 594 aa3.01□□□□□ -1.93
CTK2YJL006C STD1Q02794 444 aa3.01□□□□□ -1.93
CTK2YJL006C PEX25Q02969 394 aa3.01□□□□□ -1.93
CTK2YJL006C MMT1Q03218 510 aa3.01□□□□□ -1.93
CTK2YJL006C YMR027WQ04371 470 aa3.01□□□□□ -1.93
CTK2YJL006C YLR456WQ06199 204 aa3.01□□□□□ -1.93
CTK2YJL006C DCI1Q08558 271 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms