RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W PNG1Q02890 363 aa6.15□□□□□ -1.42
LCP5YER127W ACL4Q03771 387 aa6.15□□□□□ -1.42
LCP5YER127W SNU66Q12420 587 aaPredicted RBP6.15□□□□□ -1.42
LCP5YER127W CTF3Q12748 733 aa6.15□□□□□ -1.42
LCP5YER127W SIN4P32259 974 aa6.14□□□□□ -1.43
LCP5YER127W SLM4P38247 162 aa6.14□□□□□ -1.43
LCP5YER127W RPT4P53549 437 aaKnown RBP6.14□□□□□ -1.43
LCP5YER127W YMR317WQ04893 1140 aa6.14□□□□□ -1.43
LCP5YER127W MMR1Q06324 491 aa6.14□□□□□ -1.43
LCP5YER127W SWI1P09547 1314 aa6.14□□□□□ -1.43
LCP5YER127W SEC63P14906 663 aa6.13□□□□□ -1.43
LCP5YER127W NDI1P32340 513 aa6.13□□□□□ -1.43
LCP5YER127W PMU1P36069 295 aa6.13□□□□□ -1.43
LCP5YER127W YCR041WP37265 110 aa6.13□□□□□ -1.43
LCP5YER127W MPP10P47083 593 aaKnown RBP6.13□□□□□ -1.43
LCP5YER127W YGL260WP53056 76 aa6.13□□□□□ -1.43
LCP5YER127W ERP1Q05359 219 aaKnown RBP6.13□□□□□ -1.43
LCP5YER127W ECM25P32525 599 aa6.12□□□□□ -1.43
LCP5YER127W YHR054CP38780 354 aa6.12□□□□□ -1.43
LCP5YER127W MDM31P38880 579 aa6.12□□□□□ -1.43
LCP5YER127W TRS85P46944 698 aa6.12□□□□□ -1.43
LCP5YER127W YJR011CP47086 261 aaPredicted RBP6.12□□□□□ -1.43
LCP5YER127W AVT4P50944 713 aa6.12□□□□□ -1.43
LCP5YER127W YIP1P53039 248 aa6.12□□□□□ -1.43
LCP5YER127W PIR3Q03180 325 aa6.12□□□□□ -1.43
LCP5YER127W SXM1Q04175 944 aaKnown RBP6.12□□□□□ -1.43
LCP5YER127W MDM30Q05930 598 aa6.12□□□□□ -1.43
LCP5YER127W DCS1Q06151 350 aa6.12□□□□□ -1.43
LCP5YER127W YDL144CQ07589 356 aa6.12□□□□□ -1.43
LCP5YER127W GPM3Q12326 303 aa6.12□□□□□ -1.43
LCP5YER127W HKR1P41809 1802 aa6.11□□□□□ -1.43
LCP5YER127W CLN1P20437 546 aa6.11□□□□□ -1.43
LCP5YER127W RFC3P38629 340 aa6.11□□□□□ -1.43
LCP5YER127W LRP1P38801 184 aaKnown RBP6.11□□□□□ -1.43
LCP5YER127W SPL2P38839 148 aa6.11□□□□□ -1.43
LCP5YER127W DHH1P39517 506 aaKnown RBP6.11□□□□□ -1.43
LCP5YER127W ECM27P47144 725 aa6.11□□□□□ -1.43
LCP5YER127W YGR111WP53265 400 aa6.11□□□□□ -1.43
LCP5YER127W HEL2Q05580 639 aaKnown RBP6.11□□□□□ -1.43
LCP5YER127W TY1B-AO13527 1196 aaKnown RBP6.1□□□□□ -1.43
LCP5YER127W HIS4P00815 799 aaKnown RBP6.1□□□□□ -1.43
LCP5YER127W RPP0P05317 312 aaKnown RBP6.1□□□□□ -1.43
LCP5YER127W SPO7P18410 259 aa6.1□□□□□ -1.43
LCP5YER127W MNE1P24720 663 aa6.1□□□□□ -1.43
LCP5YER127W CDC60P26637 1090 aaKnown RBP6.1□□□□□ -1.43
LCP5YER127W GLC7P32598 312 aaKnown RBP6.1□□□□□ -1.43
LCP5YER127W MEP2P41948 499 aa6.1□□□□□ -1.43
LCP5YER127W POP6P53218 158 aa6.1□□□□□ -1.43
LCP5YER127W DCI1Q08558 271 aa6.1□□□□□ -1.43
LCP5YER127W RKM1Q08961 583 aaPredicted RBP6.1□□□□□ -1.43
LCP5YER127W FIG2P25653 1609 aa6.1□□□□□ -1.43
LCP5YER127W ATR1P13090 542 aa6.09□□□□□ -1.43
LCP5YER127W MCK1P21965 375 aaKnown RBP6.09□□□□□ -1.43
LCP5YER127W SOR1P35497 357 aaKnown RBP6.09□□□□□ -1.43
LCP5YER127W GCD10P41814 478 aa6.09□□□□□ -1.43
LCP5YER127W ARK1P53974 638 aa6.09□□□□□ -1.43
LCP5YER127W OAZ1Q02803 292 aa6.09□□□□□ -1.43
LCP5YER127W ODC1Q03028 310 aa6.09□□□□□ -1.43
LCP5YER127W IRC4Q03036 179 aa6.09□□□□□ -1.43
LCP5YER127W SOR2Q07786 357 aa6.09□□□□□ -1.43
LCP5YER127W REX4Q08237 289 aa6.09□□□□□ -1.43
LCP5YER127W MED2Q12124 431 aa6.09□□□□□ -1.43
LCP5YER127W HEM2P05373 342 aa6.08□□□□□ -1.44
LCP5YER127W GDH1P07262 454 aaKnown RBP6.08□□□□□ -1.44
LCP5YER127W CRM1P30822 1084 aaKnown RBP6.08□□□□□ -1.44
LCP5YER127W FMP46P36141 133 aaKnown RBP6.08□□□□□ -1.44
LCP5YER127W SER3P40054 469 aa6.08□□□□□ -1.44
LCP5YER127W YJL213WP40896 331 aa6.08□□□□□ -1.44
LCP5YER127W LCB2P40970 561 aa6.08□□□□□ -1.44
LCP5YER127W OCA2P53949 197 aa6.08□□□□□ -1.44
LCP5YER127W MUM3Q08750 479 aa6.08□□□□□ -1.44
LCP5YER127W AEP3Q12089 606 aa6.08□□□□□ -1.44
LCP5YER127W DAL5P15365 543 aa6.07□□□□□ -1.44
LCP5YER127W GEX1P25596 615 aa6.07□□□□□ -1.44
LCP5YER127W YFH7P43591 353 aa6.07□□□□□ -1.44
LCP5YER127W YJL132WP47014 750 aa6.07□□□□□ -1.44
LCP5YER127W HMS2P47175 358 aa6.07□□□□□ -1.44
LCP5YER127W COS10P52924 374 aa6.07□□□□□ -1.44
LCP5YER127W WSC2P53832 503 aa6.07□□□□□ -1.44
LCP5YER127W VPS9P54787 451 aa6.07□□□□□ -1.44
LCP5YER127W YPL199CQ08954 240 aa6.07□□□□□ -1.44
LCP5YER127W SCEIP03882 235 aa6.06□□□□□ -1.44
LCP5YER127W PUT3P25502 979 aaPredicted RBP6.06□□□□□ -1.44
LCP5YER127W LYS1P38998 373 aaRIP-Chip data6.06□□□□□ -1.44not detected
LCP5YER127W YJL055WP47044 245 aa6.06□□□□□ -1.44
LCP5YER127W SCS3P53012 380 aa6.06□□□□□ -1.44
LCP5YER127W PPT2Q12036 173 aa6.06□□□□□ -1.44
LCP5YER127W YPR022CQ12139 1133 aa6.06□□□□□ -1.44
LCP5YER127W PAR32Q12515 295 aaKnown RBP6.06□□□□□ -1.44
LCP5YER127W MTR10Q99189 972 aa6.06□□□□□ -1.44
LCP5YER127W GSC2P40989 1895 aa6.05□□□□□ -1.44
LCP5YER127W SAM1P10659 382 aaKnown RBP6.05□□□□□ -1.44
LCP5YER127W SAM2P19358 384 aaKnown RBP6.05□□□□□ -1.44
LCP5YER127W LOS1P33418 1100 aaPredicted RBP6.05□□□□□ -1.44
LCP5YER127W RRN10P38204 145 aa6.05□□□□□ -1.44
LCP5YER127W FRE4P53746 719 aa6.05□□□□□ -1.44
LCP5YER127W SPE3Q12074 293 aaKnown RBP6.05□□□□□ -1.44
LCP5YER127W AGA1P32323 725 aa6.04□□□□□ -1.44
LCP5YER127W GDI1P39958 451 aaKnown RBP6.04□□□□□ -1.44
LCP5YER127W VAB2P40003 282 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms