RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W DRS1P32892 752 aaKnown RBP20.95■□□□□ 0.94
LCP5YER127W MTC1P47018 478 aaKnown RBP20.52■□□□□ 0.88
LCP5YER127W BFR2Q06631 534 aaKnown RBP18.24■□□□□ 0.51
LCP5YER127W DIP2Q12220 943 aaPredicted RBP17.73■□□□□ 0.43
LCP5YER127W AVT3P36062 692 aa17.49■□□□□ 0.39
LCP5YER127W TFA1P36100 482 aa17.26■□□□□ 0.35
LCP5YER127W ISW2Q08773 1120 aa16.67■□□□□ 0.26
LCP5YER127W FAP1P53971 965 aa16.66■□□□□ 0.26
LCP5YER127W RSE1Q04693 1361 aaKnown RBP16.65■□□□□ 0.26
LCP5YER127W RPG1P38249 964 aaKnown RBP16.46■□□□□ 0.23
LCP5YER127W PRI1P10363 409 aa16.32■□□□□ 0.2
LCP5YER127W RPL17AP05740 184 aaKnown RBP16.04■□□□□ 0.16
LCP5YER127W RPL17BP46990 184 aaKnown RBP16.04■□□□□ 0.16
LCP5YER127W AAD16Q02895 342 aa16.04■□□□□ 0.16
LCP5YER127W REB1P21538 810 aa15.84■□□□□ 0.13
LCP5YER127W TSR3Q12094 313 aaKnown RBP15.59■□□□□ 0.09
LCP5YER127W PRY3P47033 881 aa15.54■□□□□ 0.08
LCP5YER127W SPT21P35209 758 aa15.35■□□□□ 0.05
LCP5YER127W RIM101P33400 625 aa15.24■□□□□ 0.03
LCP5YER127W PTP3P40048 928 aa14.99□□□□□ -0.01
LCP5YER127W MRPL32P25348 183 aa14.98□□□□□ -0.01
LCP5YER127W RQC2Q12532 1038 aaKnown RBP14.97□□□□□ -0.01
LCP5YER127W YKR023WP36119 530 aaKnown RBP14.85□□□□□ -0.03
LCP5YER127W OXP1P28273 1286 aa14.8□□□□□ -0.04
LCP5YER127W SSP1P38871 571 aa14.72□□□□□ -0.05
LCP5YER127W YAH1Q12184 172 aaKnown RBP14.71□□□□□ -0.05
LCP5YER127W YIL055CP40523 627 aaKnown RBP14.68□□□□□ -0.06
LCP5YER127W HAA1Q12753 694 aaKnown RBP14.62□□□□□ -0.07
LCP5YER127W HOP09932 586 aa14.61□□□□□ -0.07
LCP5YER127W YCK3P39962 524 aa14.59□□□□□ -0.07
LCP5YER127W TFC8Q12308 588 aa14.55□□□□□ -0.08
LCP5YER127W DCD1P06773 312 aa14.5□□□□□ -0.09
LCP5YER127W ARP8Q12386 881 aaKnown RBP RIP-Chip data14.49□□□□□ -0.09not detected
LCP5YER127W CDC27P38042 758 aa14.48□□□□□ -0.09
LCP5YER127W YLR271WQ06152 274 aa14.44□□□□□ -0.1
LCP5YER127W DMA1P38823 416 aa14.4□□□□□ -0.1
LCP5YER127W RSM7P47150 247 aa14.38□□□□□ -0.11
LCP5YER127W BCH2P36122 765 aa14.16□□□□□ -0.14
LCP5YER127W MGA2P40578 1113 aa14.16□□□□□ -0.14
LCP5YER127W AI2P03876 854 aa14.12□□□□□ -0.15
LCP5YER127W BBC1P47068 1157 aa14.03□□□□□ -0.16
LCP5YER127W CST9Q06032 482 aa14.03□□□□□ -0.16
LCP5YER127W PSD2P53037 1138 aaKnown RBP13.98□□□□□ -0.17
LCP5YER127W EPS1P40557 701 aa13.94□□□□□ -0.18
LCP5YER127W SCY1P53009 804 aa13.9□□□□□ -0.18
LCP5YER127W YGL015CP33199 130 aa13.86□□□□□ -0.19
LCP5YER127W MAP2P38174 421 aaKnown RBP13.85□□□□□ -0.19
LCP5YER127W BDF1P35817 686 aa13.82□□□□□ -0.2
LCP5YER127W UBP10P53874 792 aaPredicted RBP13.81□□□□□ -0.2
LCP5YER127W MRM1P25270 412 aa13.72□□□□□ -0.21
LCP5YER127W SLX5P32828 619 aaKnown RBP13.61□□□□□ -0.23
LCP5YER127W RTG3P38165 486 aa13.54□□□□□ -0.24
LCP5YER127W RAM2P29703 316 aa13.52□□□□□ -0.25
LCP5YER127W RCR1P38212 213 aa13.52□□□□□ -0.25
LCP5YER127W SAS10Q12136 610 aaPredicted RBP13.43□□□□□ -0.26
LCP5YER127W VPS29P38759 282 aa13.33□□□□□ -0.28
LCP5YER127W SET1P38827 1080 aaKnown RBP13.33□□□□□ -0.28
LCP5YER127W TIF4632P39936 914 aaKnown RBP13.3□□□□□ -0.28
LCP5YER127W MAK11P20484 414 aaKnown RBP13.29□□□□□ -0.28
LCP5YER127W YMR1P47147 688 aaKnown RBP RIP-Chip data13.23□□□□□ -0.29not detected
LCP5YER127W TGL3P40308 642 aa13.16□□□□□ -0.3
LCP5YER127W YFR006WP43590 535 aa13.16□□□□□ -0.3
LCP5YER127W DBP1P24784 617 aaKnown RBP13.15□□□□□ -0.3
LCP5YER127W VPS70P47161 811 aa13.14□□□□□ -0.31
LCP5YER127W STS1P38637 319 aa13.13□□□□□ -0.31
LCP5YER127W YOR238WQ08634 303 aa13.13□□□□□ -0.31
LCP5YER127W COQ8P27697 501 aa13.12□□□□□ -0.31
LCP5YER127W LEO1P38439 464 aa13.12□□□□□ -0.31
LCP5YER127W IFH1P39520 1085 aa13.11□□□□□ -0.31
LCP5YER127W MIF2P35201 549 aa13.1□□□□□ -0.31
LCP5YER127W LEU3P08638 886 aa13.07□□□□□ -0.32
LCP5YER127W YPR148CQ06523 435 aa13.07□□□□□ -0.32
LCP5YER127W PIB1Q06651 286 aa13.06□□□□□ -0.32
LCP5YER127W YAP5P40574 245 aa13.05□□□□□ -0.32
LCP5YER127W SPB4P25808 606 aaPredicted RBP13.03□□□□□ -0.32
LCP5YER127W CKB1P43639 278 aa13.03□□□□□ -0.32
LCP5YER127W NSR1P27476 414 aaKnown RBP RIP-Chip data13.01□□□□□ -0.33not detected
LCP5YER127W EDS1P38073 919 aa12.98□□□□□ -0.33
LCP5YER127W NOP53Q12080 455 aaKnown RBP12.95□□□□□ -0.34
LCP5YER127W PTC3P34221 468 aaKnown RBP12.88□□□□□ -0.35
LCP5YER127W VMA1P17255 1071 aaKnown RBP12.84□□□□□ -0.35
LCP5YER127W PBS2P08018 668 aa12.82□□□□□ -0.36
LCP5YER127W RPN1P38764 993 aaKnown RBP12.77□□□□□ -0.37
LCP5YER127W GTT3P39996 337 aa12.76□□□□□ -0.37
LCP5YER127W REF2P42073 533 aaPredicted RBP12.76□□□□□ -0.37
LCP5YER127W MST1P07236 462 aa12.75□□□□□ -0.37
LCP5YER127W DSF2P38213 736 aa12.73□□□□□ -0.37
LCP5YER127W ATH1P48016 1211 aa12.73□□□□□ -0.37
LCP5YER127W GRE2Q12068 342 aaKnown RBP12.72□□□□□ -0.37
LCP5YER127W TAF7Q05021 590 aa12.67□□□□□ -0.38
LCP5YER127W SAM3Q08986 587 aa12.66□□□□□ -0.38
LCP5YER127W GUT1P32190 709 aa12.65□□□□□ -0.38
LCP5YER127W GYP5Q12344 894 aa12.65□□□□□ -0.38
LCP5YER127W MAM3Q12296 706 aa12.64□□□□□ -0.39
LCP5YER127W VHR2P40041 505 aa12.59□□□□□ -0.39
LCP5YER127W COX6P00427 148 aa12.56□□□□□ -0.4
LCP5YER127W IES2P40154 320 aa12.56□□□□□ -0.4
LCP5YER127W MAK21Q12176 1025 aaKnown RBP12.56□□□□□ -0.4
LCP5YER127W DCW1P36091 449 aa12.55□□□□□ -0.4
LCP5YER127W SET4P42948 560 aa12.55□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms