RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	SLZ1	P40167	298 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	RGI2	P40188	164 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	YJR030C	P47101	745 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	AAD10	P47182	288 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	TRM9	P49957	279 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	SGF73	P53165	657 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	APM1	Q00776	475 aa	Predicted RBP	4.07	□□□□□ -1.76
UBC8	YEL012W	AAT1	Q01802	451 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	RRP45	Q05636	305 aa	Known RBP	4.07	□□□□□ -1.76
UBC8	YEL012W	YLR030W	Q07967	263 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	NRT1	Q08485	598 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	GPN2	Q08726	347 aa	Predicted RBP	4.07	□□□□□ -1.76
UBC8	YEL012W	LDB17	Q12342	491 aa		4.07	□□□□□ -1.76
UBC8	YEL012W	ERG27	Q12452	347 aa	Known RBP	4.07	□□□□□ -1.76
UBC8	YEL012W	CDC39	P25655	2108 aa	Known RBP	4.07	□□□□□ -1.76
UBC8	YEL012W	ADE5,7	P07244	802 aa	Known RBP	4.06	□□□□□ -1.76
UBC8	YEL012W	AMD1	P15274	810 aa	Known RBP	4.06	□□□□□ -1.76
UBC8	YEL012W	PHO13	P19881	312 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	MAK32	P23060	363 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	IMG1	P25626	169 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	IMP3	P32899	183 aa	Predicted RBP	4.06	□□□□□ -1.76
UBC8	YEL012W	RPC34	P32910	317 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	PRP18	P33411	251 aa	Predicted RBP	4.06	□□□□□ -1.76
UBC8	YEL012W	YBL055C	P34220	418 aa	Predicted RBP	4.06	□□□□□ -1.76
UBC8	YEL012W	LDB7	P38210	180 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	FTH1	P38310	465 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	DIA4	P38705	446 aa	Predicted RBP	4.06	□□□□□ -1.76
UBC8	YEL012W	SMC2	P38989	1170 aa	Known RBP	4.06	□□□□□ -1.76
UBC8	YEL012W	SEC24	P40482	926 aa	Known RBP	4.06	□□□□□ -1.76
UBC8	YEL012W	IME4	P41833	600 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	ELP2	P42935	788 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	DUO1	P53168	247 aa	Known RBP	4.06	□□□□□ -1.76
UBC8	YEL012W	RHO3	Q00245	231 aa	Known RBP	4.06	□□□□□ -1.76
UBC8	YEL012W	OSH6	Q02201	448 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	NGL3	Q03210	505 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	YDR109C	Q04585	715 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	ERV41	Q04651	352 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	CRN1	Q06440	651 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	BUD7	Q08754	746 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	NUS1	Q12063	375 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	LYS21	Q12122	440 aa	Known RBP	4.06	□□□□□ -1.76
UBC8	YEL012W	ATG9	Q12142	997 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	YDR018C	Q12185	396 aa		4.06	□□□□□ -1.76
UBC8	YEL012W	SUI3	P09064	285 aa	Known RBP	4.05	□□□□□ -1.76
UBC8	YEL012W	CDC24	P11433	854 aa	Predicted RBP	4.05	□□□□□ -1.76
UBC8	YEL012W	OLE1	P21147	510 aa	Known RBP	4.05	□□□□□ -1.76
UBC8	YEL012W	PHO84	P25297	587 aa	Known RBP	4.05	□□□□□ -1.76
UBC8	YEL012W	MEI5	P32489	222 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	RAD5	P32849	1169 aa	Predicted RBP	4.05	□□□□□ -1.76
UBC8	YEL012W	BLI1	P35727	113 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	NTR2	P36118	322 aa	Predicted RBP	4.05	□□□□□ -1.76
UBC8	YEL012W	FLO10	P36170	1169 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	UBA4	P38820	440 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	NDE1	P40215	560 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	ALG8	P40351	577 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	PHB1	P40961	287 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	JJJ1	P53863	590 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	RAD30	Q04049	632 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	SWA2	Q06677	668 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	YOL024W	Q08172	172 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	SLD7	Q08457	257 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	YLL056C	Q12177	298 aa		4.05	□□□□□ -1.76
UBC8	YEL012W	URA4	P20051	364 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	PTC6	P25646	442 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	MSP1	P28737	362 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	ATP11	P32453	318 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	TRM7	P38238	310 aa	Known RBP	4.04	□□□□□ -1.76
UBC8	YEL012W	YIL086C	P40503	102 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	YJL107C	P42947	387 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	YFR020W	P43600	232 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	YJL043W	P47053	257 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	YML6	P51998	286 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	ERG26	P53199	349 aa	Known RBP	4.04	□□□□□ -1.76
UBC8	YEL012W	YPR003C	P53394	754 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	TIM10	P87108	93 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	ARO10	Q06408	635 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	HSP42	Q12329	375 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	RMD5	Q12508	421 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	YLR111W	Q12528	110 aa		4.04	□□□□□ -1.76
UBC8	YEL012W	CDC31	P06704	161 aa	Known RBP	4.03	□□□□□ -1.76
UBC8	YEL012W	ADH7	P25377	361 aa		4.03	□□□□□ -1.76
UBC8	YEL012W	CPR3	P25719	182 aa		4.03	□□□□□ -1.76
UBC8	YEL012W	NDI1	P32340	513 aa		4.03	□□□□□ -1.76
UBC8	YEL012W	NIP1	P32497	812 aa	Known RBP	4.03	□□□□□ -1.76
UBC8	YEL012W	MGM101	P32787	269 aa	Known RBP	4.03	□□□□□ -1.76
UBC8	YEL012W	IMD2	P38697	523 aa	Known RBP	4.03	□□□□□ -1.76
UBC8	YEL012W	GIM4	P40005	111 aa	Known RBP	4.03	□□□□□ -1.76
UBC8	YEL012W	IMD3	P50095	523 aa	Known RBP	4.03	□□□□□ -1.76
UBC8	YEL012W	ZRG17	P53735	605 aa		4.03	□□□□□ -1.76
UBC8	YEL012W	VPS75	P53853	264 aa		4.03	□□□□□ -1.76
UBC8	YEL012W	RLI1	Q03195	608 aa	Known RBP	4.03	□□□□□ -1.76
UBC8	YEL012W	RPN9	Q04062	393 aa	Known RBP	4.03	□□□□□ -1.76
UBC8	YEL012W	SOV1	Q04748	898 aa		4.03	□□□□□ -1.76
UBC8	YEL012W	RSF1	Q05043	376 aa		4.03	□□□□□ -1.76
UBC8	YEL012W	APL4	Q12028	832 aa		4.03	□□□□□ -1.76
UBC8	YEL012W	RDL1	Q12305	139 aa	Known RBP	4.03	□□□□□ -1.76
UBC8	YEL012W	YLR462W	O13556	202 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	PMS1	P14242	873 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	YCK1	P23291	538 aa		4.02	□□□□□ -1.77
UBC8	YEL012W	RAD57	P25301	460 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms