Protein–RNA interactions for Protein: P53165

SGF73, SAGA-associated factor 73, yeastyeast

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGF73P53165 YML009W-BYML009W-B 477 nt19.83■□□□□ 0.77
SGF73P53165 NSR1YGR159C 1245 nt19.69■□□□□ 0.74
SGF73P53165 NOP1YDL014W 984 nt19.3■□□□□ 0.68
SGF73P53165 YKL036CYKL036C 393 nt17.9■□□□□ 0.46
SGF73P53165 MDJ1YFL016C 1536 nt17.4■□□□□ 0.38
SGF73P53165 Q0297Q0297 156 nt16.98■□□□□ 0.31
SGF73P53165 SRX1YKL086W 384 nt16.91■□□□□ 0.3
SGF73P53165 YJL027CYJL027C 417 nt16.7■□□□□ 0.26
SGF73P53165 SCS3YGL126W 1143 nt16.35■□□□□ 0.21
SGF73P53165 YCR051WYCR051W 669 nt15.99■□□□□ 0.15
SGF73P53165 YOL085CYOL085C 342 nt15.54■□□□□ 0.08
SGF73P53165 DBP2YNL112W 1641 nt15.5■□□□□ 0.07
SGF73P53165 TRN1tP(UGG)A 72 nt15.26■□□□□ 0.03
SGF73P53165 SUF9tP(UGG)F 72 nt15.26■□□□□ 0.03
SGF73P53165 SUF8tP(UGG)H 72 nt15.26■□□□□ 0.03
SGF73P53165 tP(UGG)LtP(UGG)L 72 nt15.26■□□□□ 0.03
SGF73P53165 SUF7tP(UGG)M 72 nt15.26■□□□□ 0.03
SGF73P53165 tP(UGG)N1tP(UGG)N1 72 nt15.26■□□□□ 0.03
SGF73P53165 tP(UGG)N2tP(UGG)N2 72 nt15.26■□□□□ 0.03
SGF73P53165 tP(UGG)O1tP(UGG)O1 72 nt15.26■□□□□ 0.03
SGF73P53165 SUF11tP(UGG)O2 72 nt15.26■□□□□ 0.03
SGF73P53165 PKP1YIL042C 1185 nt15.26■□□□□ 0.03
SGF73P53165 RPP1BYDL130W 321 nt15.22■□□□□ 0.03
SGF73P53165 CCC1YLR220W 969 nt15.05■□□□□ -0
SGF73P53165 YBR190WYBR190W 312 nt14.82□□□□□ -0.04
SGF73P53165 ATS1YAL020C 1002 nt14.65□□□□□ -0.06
SGF73P53165 SCJ1YMR214W 1134 nt14.58□□□□□ -0.08
SGF73P53165 PET122YER153C 765 nt14.54□□□□□ -0.08
SGF73P53165 RVS167YDR388W 1449 nt14.47□□□□□ -0.09
SGF73P53165 tP(UGG)O3tP(UGG)O3 72 nt14.45□□□□□ -0.1
SGF73P53165 RTC3YHR087W 336 nt14.43□□□□□ -0.1
SGF73P53165 SCR1SCR1 522 nt14.34□□□□□ -0.11
SGF73P53165 RRN5YLR141W 1092 nt14.12□□□□□ -0.15
SGF73P53165 SHR5YOL110W 714 nt14.04□□□□□ -0.16
SGF73P53165 YDJ1YNL064C 1230 nt13.98□□□□□ -0.17
SGF73P53165 YER088W-BYER088W-B 147 nt13.86□□□□□ -0.19
SGF73P53165 RSB1YOR049C 1065 nt13.81□□□□□ -0.2
SGF73P53165 GAR1YHR089C 618 nt13.62□□□□□ -0.23
SGF73P53165 DEP1YAL013W 1218 nt13.59□□□□□ -0.23
SGF73P53165 URN1YPR152C 1398 nt13.58□□□□□ -0.23
SGF73P53165 PST2YDR032C 597 nt13.58□□□□□ -0.24
SGF73P53165 PUT4YOR348C 1884 nt13.45□□□□□ -0.26
SGF73P53165 YNL208WYNL208W 600 nt13.4□□□□□ -0.26
SGF73P53165 OPI9YLR338W 858 nt13.39□□□□□ -0.27
SGF73P53165 RPN10YHR200W 807 nt13.35□□□□□ -0.27
SGF73P53165 SAH1YER043C 1350 nt13.28□□□□□ -0.28
SGF73P53165 ARE1YCR048W 1833 nt13.23□□□□□ -0.29
SGF73P53165 TIR1YER011W 765 nt13.18□□□□□ -0.3
SGF73P53165 SSA1YAL005C 1929 nt13.05□□□□□ -0.32
SGF73P53165 YKL097CYKL097C 411 nt13.02□□□□□ -0.33
SGF73P53165 SHU1YHL006C 453 nt13□□□□□ -0.33
SGF73P53165 YHR049C-AYHR049C-A 297 nt13□□□□□ -0.33
SGF73P53165 POA1YBR022W 534 nt13□□□□□ -0.33
SGF73P53165 PUN1YLR414C 792 nt12.97□□□□□ -0.33
SGF73P53165 YJR018WYJR018W 363 nt12.95□□□□□ -0.34
SGF73P53165 SRB2YHR041C 633 nt12.9□□□□□ -0.34
SGF73P53165 YJR120WYJR120W 351 nt12.87□□□□□ -0.35
SGF73P53165 PTC2YER089C 1395 nt12.81□□□□□ -0.36
SGF73P53165 YAL037C-BYAL037C-B 975 nt12.75□□□□□ -0.37
SGF73P53165 Q0182Q0182 405 nt12.71□□□□□ -0.37
SGF73P53165 BSC6YOL137W 1494 nt12.71□□□□□ -0.38
SGF73P53165 RPP2BYDR382W 333 nt12.67□□□□□ -0.38
SGF73P53165 BUD23YCR047C 828 nt12.66□□□□□ -0.38
SGF73P53165 SSA3YBL075C 1950 nt12.64□□□□□ -0.39
SGF73P53165 NAB2YGL122C 1578 nt12.64□□□□□ -0.39
SGF73P53165 WWM1YFL010C 636 nt12.62□□□□□ -0.39
SGF73P53165 HOM6YJR139C 1080 nt12.56□□□□□ -0.4
SGF73P53165 YOR139CYOR139C 393 nt12.56□□□□□ -0.4
SGF73P53165 YGR021WYGR021W 873 nt12.54□□□□□ -0.4
SGF73P53165 FIS1YIL065C 468 nt12.52□□□□□ -0.41
SGF73P53165 DAL1YIR027C 1383 nt12.49□□□□□ -0.41
SGF73P53165 MNP1YGL068W 585 nt12.49□□□□□ -0.41
SGF73P53165 BDH2YAL061W 1254 nt12.49□□□□□ -0.41
SGF73P53165 INM2YDR287W 879 nt12.48□□□□□ -0.41
SGF73P53165 YFL021C-AYFL021C-A 855 nt12.41□□□□□ -0.42
SGF73P53165 FPR4YLR449W 1179 nt12.4□□□□□ -0.42
SGF73P53165 PHO4YFR034C 939 nt12.38□□□□□ -0.43
SGF73P53165 YBL100CYBL100C 315 nt12.38□□□□□ -0.43
SGF73P53165 RKM5YLR137W 1104 nt12.36□□□□□ -0.43
SGF73P53165 LSM3YLR438C-A 270 nt12.35□□□□□ -0.43
SGF73P53165 NPL3YDR432W 1245 nt12.34□□□□□ -0.43
SGF73P53165 YOL037CYOL037C 354 nt12.29□□□□□ -0.44
SGF73P53165 FUN26YAL022C 1554 nt12.26□□□□□ -0.45
SGF73P53165 TRM9YML014W 840 nt12.21□□□□□ -0.45
SGF73P53165 SPT5YML010W 3192 nt12.17□□□□□ -0.46
SGF73P53165 CCT6YDR188W 1641 nt12.13□□□□□ -0.47
SGF73P53165 YPS1YLR120C 1710 nt12.13□□□□□ -0.47
SGF73P53165 YDR095CYDR095C 411 nt12.06□□□□□ -0.48
SGF73P53165 tM(CAU)CtM(CAU)C 72 nt12.05□□□□□ -0.48
SGF73P53165 IMT4tM(CAU)E 72 nt12.05□□□□□ -0.48
SGF73P53165 IMT3tM(CAU)J3 72 nt12.05□□□□□ -0.48
SGF73P53165 IMT1tM(CAU)O1 72 nt12.05□□□□□ -0.48
SGF73P53165 IMT2tM(CAU)P 72 nt12.05□□□□□ -0.48
SGF73P53165 MOT3YMR070W 1473 nt12.05□□□□□ -0.48
SGF73P53165 YLR281CYLR281C 468 nt12.04□□□□□ -0.48
SGF73P53165 ALF1YNL148C 765 nt12□□□□□ -0.49
SGF73P53165 WHI5YOR083W 888 nt11.97□□□□□ -0.49
SGF73P53165 SUF2tP(AGG)C 72 nt11.96□□□□□ -0.49
SGF73P53165 SUF10tP(AGG)N 72 nt11.96□□□□□ -0.49
SGF73P53165 YHR165W-AYHR165W-A 312 nt11.93□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 75.3 ms