RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C PHB2P50085 310 aa3.81□□□□□ -1.8
RRI1YDL216C MTM1P53320 366 aa3.81□□□□□ -1.8
RRI1YDL216C RHO5P53879 331 aaKnown RBP3.81□□□□□ -1.8
RRI1YDL216C OCA2P53949 197 aa3.81□□□□□ -1.8
RRI1YDL216C OAZ1Q02803 292 aa3.81□□□□□ -1.8
RRI1YDL216C BCH1Q05029 724 aa3.81□□□□□ -1.8
RRI1YDL216C VPS54Q12071 889 aa3.81□□□□□ -1.8
RRI1YDL216C HRT3Q12347 344 aa3.81□□□□□ -1.8
RRI1YDL216C ADE4P04046 510 aaKnown RBP3.8□□□□□ -1.8
RRI1YDL216C CLN3P13365 580 aa3.8□□□□□ -1.8
RRI1YDL216C CDC60P26637 1090 aaKnown RBP3.8□□□□□ -1.8
RRI1YDL216C MRPL4P36517 319 aa3.8□□□□□ -1.8
RRI1YDL216C MSG5P38590 489 aa3.8□□□□□ -1.8
RRI1YDL216C PEX25Q02969 394 aa3.8□□□□□ -1.8
RRI1YDL216C URH1Q04179 340 aa3.8□□□□□ -1.8
RRI1YDL216C RAD57P25301 460 aa3.79□□□□□ -1.8
RRI1YDL216C RVS161P25343 265 aaKnown RBP3.79□□□□□ -1.8
RRI1YDL216C POP5P28005 173 aa3.79□□□□□ -1.8
RRI1YDL216C YBR056WP38081 501 aa3.79□□□□□ -1.8
RRI1YDL216C SWD3P38123 315 aa3.79□□□□□ -1.8
RRI1YDL216C JLP2P40206 208 aa3.79□□□□□ -1.8
RRI1YDL216C ZIM17P42844 174 aa3.79□□□□□ -1.8
RRI1YDL216C TCB2P48231 1178 aa3.79□□□□□ -1.8
RRI1YDL216C AEP3Q12089 606 aa3.79□□□□□ -1.8
RRI1YDL216C RUP1Q12242 671 aa3.79□□□□□ -1.8
RRI1YDL216C TPT1Q12272 230 aaKnown RBP3.79□□□□□ -1.8
RRI1YDL216C SNU66Q12420 587 aaPredicted RBP3.79□□□□□ -1.8
RRI1YDL216C ADH2P00331 348 aaKnown RBP3.78□□□□□ -1.8
RRI1YDL216C CYC3P06182 269 aa3.78□□□□□ -1.8
RRI1YDL216C NFT1P0CE68 1218 aa3.78□□□□□ -1.8
RRI1YDL216C RPS8AP0CX39 200 aaKnown RBP3.78□□□□□ -1.8
RRI1YDL216C RPS8BP0CX40 200 aaKnown RBP3.78□□□□□ -1.8
RRI1YDL216C MDH1P17505 334 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
RRI1YDL216C KAR9P32526 644 aa3.78□□□□□ -1.8
RRI1YDL216C MPE1P35728 441 aaKnown RBP3.78□□□□□ -1.8
RRI1YDL216C VHS2P40463 436 aa3.78□□□□□ -1.8
RRI1YDL216C RPN9Q04062 393 aaKnown RBP3.78□□□□□ -1.8
RRI1YDL216C YLR345WQ06137 509 aa3.78□□□□□ -1.8
RRI1YDL216C RRP9Q06506 573 aaKnown RBP3.78□□□□□ -1.8
RRI1YDL216C NDE2Q07500 545 aa3.78□□□□□ -1.8
RRI1YDL216C RRP1P35178 278 aaPredicted RBP3.77□□□□□ -1.81
RRI1YDL216C OLA1P38219 394 aaKnown RBP3.77□□□□□ -1.81
RRI1YDL216C YPS6P40583 537 aa3.77□□□□□ -1.81
RRI1YDL216C YGL039WP53183 348 aaKnown RBP3.77□□□□□ -1.81
RRI1YDL216C AIM32Q04689 311 aa3.77□□□□□ -1.81
RRI1YDL216C IRC25Q07951 179 aa3.77□□□□□ -1.81
RRI1YDL216C FDH1Q08911 376 aa3.77□□□□□ -1.81
RRI1YDL216C ASC1P38011 319 aaKnown RBP3.76□□□□□ -1.81
RRI1YDL216C ATP3P38077 311 aaKnown RBP3.76□□□□□ -1.81
RRI1YDL216C SRP72P38688 640 aaKnown RBP3.76□□□□□ -1.81
RRI1YDL216C GAT2P40209 560 aa3.76□□□□□ -1.81
RRI1YDL216C YGR111WP53265 400 aa3.76□□□□□ -1.81
RRI1YDL216C MMT1Q03218 510 aa3.76□□□□□ -1.81
RRI1YDL216C ADD37Q03233 198 aa3.76□□□□□ -1.81
RRI1YDL216C PRP42Q03776 544 aaKnown RBP3.76□□□□□ -1.81
RRI1YDL216C YMR027WQ04371 470 aa3.76□□□□□ -1.81
RRI1YDL216C MHR1Q06630 226 aa3.76□□□□□ -1.81
RRI1YDL216C RAX1Q08760 435 aa3.76□□□□□ -1.81
RRI1YDL216C YRM1Q12340 786 aa3.76□□□□□ -1.81
RRI1YDL216C COX3P00420 269 aa3.75□□□□□ -1.81
RRI1YDL216C IMA3P0CW40 589 aa3.75□□□□□ -1.81
RRI1YDL216C IMA4P0CW41 589 aa3.75□□□□□ -1.81
RRI1YDL216C YCL068CP25593 260 aa3.75□□□□□ -1.81
RRI1YDL216C SPR1P32603 445 aa3.75□□□□□ -1.81
RRI1YDL216C CHK1P38147 527 aa3.75□□□□□ -1.81
RRI1YDL216C SER3P40054 469 aa3.75□□□□□ -1.81
RRI1YDL216C MDE1P47095 244 aa3.75□□□□□ -1.81
RRI1YDL216C STD1Q02794 444 aa3.75□□□□□ -1.81
RRI1YDL216C IMA2Q08295 589 aa3.75□□□□□ -1.81
RRI1YDL216C RBD2Q12270 262 aa3.75□□□□□ -1.81
RRI1YDL216C WTM1Q12363 437 aaKnown RBP3.75□□□□□ -1.81
RRI1YDL216C CEX1Q12453 761 aa3.75□□□□□ -1.81
RRI1YDL216C SMC6Q12749 1114 aa3.75□□□□□ -1.81
RRI1YDL216C ZTA1P38230 334 aaKnown RBP3.74□□□□□ -1.81
RRI1YDL216C BRO1P48582 844 aa3.74□□□□□ -1.81
RRI1YDL216C MTQ1P53944 314 aa3.74□□□□□ -1.81
RRI1YDL216C CIK1Q01649 594 aa3.74□□□□□ -1.81
RRI1YDL216C SNT309Q06091 175 aaPredicted RBP3.74□□□□□ -1.81
RRI1YDL216C TMC1Q08422 150 aaPredicted RBP3.74□□□□□ -1.81
RRI1YDL216C HSP104P31539 908 aaKnown RBP3.73□□□□□ -1.81
RRI1YDL216C CYS4P32582 507 aaKnown RBP3.73□□□□□ -1.81
RRI1YDL216C LTV1P34078 463 aa3.73□□□□□ -1.81
RRI1YDL216C PXA2P34230 853 aa3.73□□□□□ -1.81
RRI1YDL216C COX14P39103 70 aa3.73□□□□□ -1.81
RRI1YDL216C YIL029CP40538 142 aa3.73□□□□□ -1.81
RRI1YDL216C BUD27P43573 796 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
RRI1YDL216C YML6P51998 286 aa3.73□□□□□ -1.81
RRI1YDL216C SHY1P53266 389 aa3.73□□□□□ -1.81
RRI1YDL216C NAM2P11325 894 aa3.72□□□□□ -1.81
RRI1YDL216C ARO3P14843 370 aaKnown RBP3.72□□□□□ -1.81
RRI1YDL216C VMA8P32610 256 aaKnown RBP3.72□□□□□ -1.81
RRI1YDL216C HEL1P36113 551 aa3.72□□□□□ -1.81
RRI1YDL216C YLR152CP54072 576 aa3.72□□□□□ -1.81
RRI1YDL216C NUP116Q02630 1113 aa3.72□□□□□ -1.81
RRI1YDL216C CCE1Q03702 353 aa3.72□□□□□ -1.81
RRI1YDL216C DCI1Q08558 271 aa3.72□□□□□ -1.81
RRI1YDL216C DST1P07273 309 aa3.71□□□□□ -1.81
RRI1YDL216C RIM1P32445 135 aaKnown RBP3.71□□□□□ -1.81
RRI1YDL216C STN1P38960 494 aa3.71□□□□□ -1.81
RRI1YDL216C YER079WP40052 210 aaKnown RBP3.71□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms