RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W MCA1Q08601 432 aa5.12□□□□□ -1.59
SPG4YMR107W CLP1Q08685 445 aaPredicted RBP5.12□□□□□ -1.59
SPG4YMR107W RRG7Q08774 242 aaPredicted RBP5.12□□□□□ -1.59
SPG4YMR107W FEX2Q08991 375 aa5.12□□□□□ -1.59
SPG4YMR107W TY1A-BLQ12266 440 aa5.12□□□□□ -1.59
SPG4YMR107W MED4Q12343 284 aa5.12□□□□□ -1.59
SPG4YMR107W MHF2Q3E829 80 aa5.12□□□□□ -1.59
SPG4YMR107W YOR019WQ99248 730 aa5.12□□□□□ -1.59
SPG4YMR107W SLH1P53327 1967 aaKnown RBP5.11□□□□□ -1.59
SPG4YMR107W YBR085C-AO43137 85 aa5.11□□□□□ -1.59
SPG4YMR107W FLP1P03870 423 aa5.11□□□□□ -1.59
SPG4YMR107W SPT3P06844 337 aa5.11□□□□□ -1.59
SPG4YMR107W CHS1P08004 1131 aa5.11□□□□□ -1.59
SPG4YMR107W SWI5P08153 709 aa5.11□□□□□ -1.59
SPG4YMR107W MDH1P17505 334 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
SPG4YMR107W SGF29P25554 259 aa5.11□□□□□ -1.59
SPG4YMR107W PGS1P25578 521 aa5.11□□□□□ -1.59
SPG4YMR107W RNP1P32385 249 aa5.11□□□□□ -1.59
SPG4YMR107W PTM1P32857 523 aa5.11□□□□□ -1.59
SPG4YMR107W FLO10P36170 1169 aa5.11□□□□□ -1.59
SPG4YMR107W GIC1P38785 314 aa5.11□□□□□ -1.59
SPG4YMR107W LYS9P38999 446 aa5.11□□□□□ -1.59
SPG4YMR107W ISC1P40015 477 aaKnown RBP5.11□□□□□ -1.59
SPG4YMR107W DOT6P40059 670 aaKnown RBP5.11□□□□□ -1.59
SPG4YMR107W EMP65P40085 556 aa5.11□□□□□ -1.59
SPG4YMR107W ARF3P40994 183 aaRIP-Chip data5.11□□□□□ -1.59not detected
SPG4YMR107W CAF16P43569 289 aa5.11□□□□□ -1.59
SPG4YMR107W SPT20P50875 604 aa5.11□□□□□ -1.59
SPG4YMR107W HOS2P53096 452 aaPredicted RBP5.11□□□□□ -1.59
SPG4YMR107W PRM8P53174 237 aa5.11□□□□□ -1.59
SPG4YMR107W YGR026WP53217 278 aa5.11□□□□□ -1.59
SPG4YMR107W SOK2P53438 785 aaPredicted RBP5.11□□□□□ -1.59
SPG4YMR107W COS1P53822 381 aa5.11□□□□□ -1.59
SPG4YMR107W IDP3P53982 420 aaKnown RBP5.11□□□□□ -1.59
SPG4YMR107W PET117Q02771 107 aa5.11□□□□□ -1.59
SPG4YMR107W YML131WQ03102 365 aa5.11□□□□□ -1.59
SPG4YMR107W SIZ1Q04195 904 aa5.11□□□□□ -1.59
SPG4YMR107W RCO1Q04779 684 aa5.11□□□□□ -1.59
SPG4YMR107W ECM7Q06200 448 aa5.11□□□□□ -1.59
SPG4YMR107W SWA2Q06677 668 aa5.11□□□□□ -1.59
SPG4YMR107W GPM2Q12008 311 aa5.11□□□□□ -1.59
SPG4YMR107W YLR049CQ12110 428 aa5.11□□□□□ -1.59
SPG4YMR107W BSC1Q12140 328 aa5.11□□□□□ -1.59
SPG4YMR107W UBX3Q12229 455 aa5.11□□□□□ -1.59
SPG4YMR107W MDY2Q12285 212 aa5.11□□□□□ -1.59
SPG4YMR107W AAC1P04710 309 aa5.1□□□□□ -1.59
SPG4YMR107W RPC40P07703 335 aaKnown RBP5.1□□□□□ -1.59
SPG4YMR107W ERG20P08524 352 aaKnown RBP5.1□□□□□ -1.59
SPG4YMR107W ASP3-2P0CX77 362 aa5.1□□□□□ -1.59
SPG4YMR107W ASP3-3P0CX78 362 aa5.1□□□□□ -1.59
SPG4YMR107W ASP3-4P0CX79 362 aa5.1□□□□□ -1.59
SPG4YMR107W ASP3-1P0CZ17 362 aa5.1□□□□□ -1.59
SPG4YMR107W NHP6BP11633 99 aaKnown RBP5.1□□□□□ -1.59
SPG4YMR107W LAT1P12695 482 aaKnown RBP5.1□□□□□ -1.59
SPG4YMR107W SNC1P31109 117 aa5.1□□□□□ -1.59
SPG4YMR107W HYM1P32464 399 aa5.1□□□□□ -1.59
SPG4YMR107W YBL010CP32788 280 aa5.1□□□□□ -1.59
SPG4YMR107W PDR3P33200 976 aa5.1□□□□□ -1.59
SPG4YMR107W MRPL40P36534 297 aa5.1□□□□□ -1.59
SPG4YMR107W SFB3P38810 929 aa5.1□□□□□ -1.59
SPG4YMR107W RGA1P39083 1007 aa5.1□□□□□ -1.59
SPG4YMR107W SLX8P40072 274 aa5.1□□□□□ -1.59
SPG4YMR107W GDS1P41913 522 aa5.1□□□□□ -1.59
SPG4YMR107W LSM1P47017 172 aaKnown RBP5.1□□□□□ -1.59
SPG4YMR107W AIM24P47127 394 aa5.1□□□□□ -1.59
SPG4YMR107W HMS2P47175 358 aa5.1□□□□□ -1.59
SPG4YMR107W GTF1P53260 183 aaPredicted RBP5.1□□□□□ -1.59
SPG4YMR107W YGR127WP53275 312 aa5.1□□□□□ -1.59
SPG4YMR107W GTR2P53290 341 aa5.1□□□□□ -1.59
SPG4YMR107W NRD1P53617 575 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
SPG4YMR107W ERO1Q03103 563 aa5.1□□□□□ -1.59
SPG4YMR107W YMR010WQ03687 405 aa5.1□□□□□ -1.59
SPG4YMR107W RRN11Q04712 507 aa5.1□□□□□ -1.59
SPG4YMR107W ENT2Q05785 613 aa5.1□□□□□ -1.59
SPG4YMR107W BUR2Q05949 395 aa5.1□□□□□ -1.59
SPG4YMR107W PMT7Q06644 662 aa5.1□□□□□ -1.59
SPG4YMR107W ACK1Q07622 623 aaPredicted RBP5.1□□□□□ -1.59
SPG4YMR107W UAF30Q08747 228 aa5.1□□□□□ -1.59
SPG4YMR107W MRH1Q12117 320 aaPredicted RBP5.1□□□□□ -1.59
SPG4YMR107W UPC2Q12151 913 aa5.1□□□□□ -1.59
SPG4YMR107W YPR063CQ12160 140 aa5.1□□□□□ -1.59
SPG4YMR107W SIA1Q12212 622 aa5.1□□□□□ -1.59
SPG4YMR107W YRM1Q12340 786 aa5.1□□□□□ -1.59
SPG4YMR107W HXK2P04807 486 aaKnown RBP5.09□□□□□ -1.59
SPG4YMR107W SIR3P06701 978 aa5.09□□□□□ -1.59
SPG4YMR107W FUM1P08417 488 aaKnown RBP5.09□□□□□ -1.59
SPG4YMR107W RPL4AP10664 362 aaKnown RBP5.09□□□□□ -1.59
SPG4YMR107W HOM2P13663 365 aaKnown RBP5.09□□□□□ -1.59
SPG4YMR107W CMP2P14747 604 aa5.09□□□□□ -1.59
SPG4YMR107W VBA3P25594 458 aa5.09□□□□□ -1.59
SPG4YMR107W GSH1P32477 678 aa5.09□□□□□ -1.59
SPG4YMR107W PET309P32522 965 aaPredicted RBP5.09□□□□□ -1.59
SPG4YMR107W PET127P32606 800 aa5.09□□□□□ -1.59
SPG4YMR107W VBA5P36172 582 aa5.09□□□□□ -1.59
SPG4YMR107W ERT1P38140 529 aa5.09□□□□□ -1.59
SPG4YMR107W YBL028CP38202 106 aa5.09□□□□□ -1.59
SPG4YMR107W SSO2P39926 295 aa5.09□□□□□ -1.59
SPG4YMR107W GID8P40208 455 aa5.09□□□□□ -1.59
SPG4YMR107W KTR7P40504 517 aa5.09□□□□□ -1.59
SPG4YMR107W YIL077CP40508 320 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms